RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 SCUBE3Q8IX30 993 aa14.37□□□□□ -0.11
AC055748.1-201ENST00000489836 GPCPD1Q9NPB8 672 aa14.37□□□□□ -0.11
AC055748.1-201ENST00000489836 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
AC055748.1-201ENST00000489836 CDC42BPGQ6DT37 1551 aa14.37□□□□□ -0.11
AC055748.1-201ENST00000489836 NR1I2O75469 434 aa14.36□□□□□ -0.11
AC055748.1-201ENST00000489836 PRAM1Q96QH2 718 aa14.36□□□□□ -0.11
AC055748.1-201ENST00000489836 COL16A1Q07092 1604 aaPredicted RBP14.35□□□□□ -0.11
AC055748.1-201ENST00000489836 MORN1Q5T089 497 aa14.35□□□□□ -0.11
AC055748.1-201ENST00000489836 TMUB1Q9BVT8 246 aa14.35□□□□□ -0.11
AC055748.1-201ENST00000489836 CLCN1P35523 988 aa14.34□□□□□ -0.11
AC055748.1-201ENST00000489836 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
AC055748.1-201ENST00000489836 ORAI2Q96SN7 254 aa14.34□□□□□ -0.11
AC055748.1-201ENST00000489836 TRAK1Q9UPV9 953 aa14.34□□□□□ -0.11
AC055748.1-201ENST00000489836 PHLPP1O60346 1717 aa14.33□□□□□ -0.12
AC055748.1-201ENST00000489836 KIAA1210Q9ULL0 1709 aa14.33□□□□□ -0.12
AC055748.1-201ENST00000489836 ATP6V1AP38606 617 aa14.33□□□□□ -0.12
AC055748.1-201ENST00000489836 NBPF1Q3BBV0 1214 aa14.33□□□□□ -0.12
AC055748.1-201ENST00000489836 FAM217BQ9NTX9 383 aaPredicted RBP14.33□□□□□ -0.12
AC055748.1-201ENST00000489836 MED1Q15648 1581 aaPredicted RBP14.33□□□□□ -0.12
AC055748.1-201ENST00000489836 JCADQ9P266 1359 aa14.33□□□□□ -0.12
AC055748.1-201ENST00000489836 DISP3Q9P2K9 1392 aa14.33□□□□□ -0.12
AC055748.1-201ENST00000489836 NHSL1Q5SYE7 1610 aa14.31□□□□□ -0.12
AC055748.1-201ENST00000489836 S1PR4O95977 384 aa14.31□□□□□ -0.12
AC055748.1-201ENST00000489836 POGKQ9P215 609 aa14.31□□□□□ -0.12
AC055748.1-201ENST00000489836 SLC27A5Q9Y2P5 690 aa14.31□□□□□ -0.12
AC055748.1-201ENST00000489836 SOS2Q07890 1332 aaPredicted RBP14.31□□□□□ -0.12
AC055748.1-201ENST00000489836 ADH1BP00325 375 aa14.3□□□□□ -0.12
AC055748.1-201ENST00000489836 SAFB2Q14151 953 aaKnown RBP eCLIP14.3□□□□□ -0.12
AC055748.1-201ENST00000489836 DDX17Q92841 729 aaKnown RBP14.3□□□□□ -0.12
AC055748.1-201ENST00000489836 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
AC055748.1-201ENST00000489836 GGCXP38435 758 aa14.29□□□□□ -0.12
AC055748.1-201ENST00000489836 TTLL12Q14166 644 aaPredicted RBP14.29□□□□□ -0.12
AC055748.1-201ENST00000489836 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
AC055748.1-201ENST00000489836 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
AC055748.1-201ENST00000489836 FMN2Q9NZ56 1722 aa14.29□□□□□ -0.12
AC055748.1-201ENST00000489836 RNF223E7ERA6 249 aa14.28□□□□□ -0.12
AC055748.1-201ENST00000489836 ESCO1Q5FWF5 840 aa14.28□□□□□ -0.12
AC055748.1-201ENST00000489836 HLA-CQ95604 372 aa14.28□□□□□ -0.12
AC055748.1-201ENST00000489836 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
AC055748.1-201ENST00000489836 PRKD2Q9BZL6 878 aa14.28□□□□□ -0.12
AC055748.1-201ENST00000489836 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.12
AC055748.1-201ENST00000489836 KDM4AO75164 1064 aa14.27□□□□□ -0.13
AC055748.1-201ENST00000489836 NBPF8Q3BBV2 869 aa14.27□□□□□ -0.13
AC055748.1-201ENST00000489836 SPSB2Q99619 263 aa14.27□□□□□ -0.13
AC055748.1-201ENST00000489836 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.13
AC055748.1-201ENST00000489836 ANKARQ7Z5J8 1434 aa14.26□□□□□ -0.13
AC055748.1-201ENST00000489836 NPHP3Q7Z494 1330 aa14.26□□□□□ -0.13
AC055748.1-201ENST00000489836 WASLO00401 505 aaPredicted RBP14.26□□□□□ -0.13
AC055748.1-201ENST00000489836 TRIM66O15016 1216 aa14.26□□□□□ -0.13
AC055748.1-201ENST00000489836 AMHR2Q16671 573 aa14.26□□□□□ -0.13
AC055748.1-201ENST00000489836 THAP11Q96EK4 314 aa14.25□□□□□ -0.13
AC055748.1-201ENST00000489836 SLC24A3Q9HC58 644 aa14.25□□□□□ -0.13
AC055748.1-201ENST00000489836 SHPRHQ149N8 1683 aa14.25□□□□□ -0.13
AC055748.1-201ENST00000489836 GPRASP1Q5JY77 1395 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 PNPLA6Q8IY17 1366 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 TONSLQ96HA7 1378 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 TRPM1Q7Z4N2 1603 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 FOXO3O43524 673 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 SSTR3P32745 418 aaPredicted RBP14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 RNF19BQ6ZMZ0 732 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 ILDR2Q71H61 639 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 AK7Q96M32 723 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 SLC6A16Q9GZN6 736 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 RGS17Q9UGC6 210 aaPredicted RBP14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 PXDNQ92626 1479 aa14.24□□□□□ -0.13
AC055748.1-201ENST00000489836 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
AC055748.1-201ENST00000489836 GIGYF2Q6Y7W6 1299 aaKnown RBP14.23□□□□□ -0.13
AC055748.1-201ENST00000489836 LRP6O75581 1613 aa14.23□□□□□ -0.13
AC055748.1-201ENST00000489836 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
AC055748.1-201ENST00000489836 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
AC055748.1-201ENST00000489836 TULP4Q9NRJ4 1543 aa14.22□□□□□ -0.13
AC055748.1-201ENST00000489836 GUCA2AQ02747 115 aa14.21□□□□□ -0.13
AC055748.1-201ENST00000489836 GRIPAP1Q4V328 841 aa14.21□□□□□ -0.13
AC055748.1-201ENST00000489836 PARP9Q8IXQ6 854 aa14.21□□□□□ -0.13
AC055748.1-201ENST00000489836 IRX2Q9BZI1 471 aaPredicted RBP14.21□□□□□ -0.13
AC055748.1-201ENST00000489836 ROCK2O75116 1388 aaKnown RBP14.21□□□□□ -0.14
AC055748.1-201ENST00000489836 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
AC055748.1-201ENST00000489836 CENPJQ9HC77 1338 aaPredicted RBP14.2□□□□□ -0.14
AC055748.1-201ENST00000489836 HOXA2O43364 376 aa14.2□□□□□ -0.14
AC055748.1-201ENST00000489836 FMNL1O95466 1100 aaPredicted RBP14.2□□□□□ -0.14
AC055748.1-201ENST00000489836 BRICD5Q6PL45 260 aa14.2□□□□□ -0.14
AC055748.1-201ENST00000489836 KRT28Q7Z3Y7 464 aa14.19□□□□□ -0.14
AC055748.1-201ENST00000489836 FAM160A2Q8N612 972 aaPredicted RBP14.19□□□□□ -0.14
AC055748.1-201ENST00000489836 EMID1Q96A84 441 aaPredicted RBP14.19□□□□□ -0.14
AC055748.1-201ENST00000489836 CDK19Q9BWU1 502 aa14.19□□□□□ -0.14
AC055748.1-201ENST00000489836 PRDM9Q9NQV7 894 aa14.19□□□□□ -0.14
AC055748.1-201ENST00000489836 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
AC055748.1-201ENST00000489836 XPCQ01831 940 aaPredicted RBP14.18□□□□□ -0.14
AC055748.1-201ENST00000489836 NUDT16Q96DE0 195 aaKnown RBP14.18□□□□□ -0.14
AC055748.1-201ENST00000489836 TIMELESSQ9UNS1 1208 aa14.18□□□□□ -0.14
AC055748.1-201ENST00000489836 RGPD8O14715 1765 aaPredicted RBP14.18□□□□□ -0.14
AC055748.1-201ENST00000489836 ATP7BP35670 1465 aa14.18□□□□□ -0.14
AC055748.1-201ENST00000489836 RALGAPBQ86X10 1494 aa14.18□□□□□ -0.14
AC055748.1-201ENST00000489836 NUTM1Q86Y26 1132 aa14.17□□□□□ -0.14
AC055748.1-201ENST00000489836 ANKLE1Q8NAG6 615 aa14.17□□□□□ -0.14
AC055748.1-201ENST00000489836 PMFBP1Q8TBY8 1022 aa14.17□□□□□ -0.14
AC055748.1-201ENST00000489836 SBNO1A3KN83 1393 aa14.17□□□□□ -0.14
AC055748.1-201ENST00000489836 COL22A1Q8NFW1 1626 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms