RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 TRIM35Q9UPQ4 493 aa10.87□□□□□ -0.67
GABRE-210ENST00000489333 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
GABRE-210ENST00000489333 LMO7Q8WWI1 1683 aa10.87□□□□□ -0.67
GABRE-210ENST00000489333 AKAP12Q02952 1782 aa10.87□□□□□ -0.67
GABRE-210ENST00000489333 CAMTA1Q9Y6Y1 1673 aa10.86□□□□□ -0.67
GABRE-210ENST00000489333 PLEKHG3A1L390 1219 aa10.86□□□□□ -0.67
GABRE-210ENST00000489333 TRIM37O94972 964 aa10.86□□□□□ -0.67
GABRE-210ENST00000489333 R3HDM1Q15032 1099 aaKnown RBP10.86□□□□□ -0.67
GABRE-210ENST00000489333 EZH2Q15910 746 aaKnown RBP10.86□□□□□ -0.67
GABRE-210ENST00000489333 NFE2L2Q16236 605 aa10.86□□□□□ -0.67
GABRE-210ENST00000489333 SMC5Q8IY18 1101 aa10.86□□□□□ -0.67
GABRE-210ENST00000489333 MAP2P11137 1827 aaKnown RBP10.86□□□□□ -0.67
GABRE-210ENST00000489333 EXOSC9Q06265 439 aaKnown RBP10.85□□□□□ -0.67
GABRE-210ENST00000489333 GSE1Q14687 1217 aa10.85□□□□□ -0.67
GABRE-210ENST00000489333 NFKBIBQ15653 356 aa10.85□□□□□ -0.67
GABRE-210ENST00000489333 LARP1Q6PKG0 1096 aaKnown RBP10.85□□□□□ -0.67
GABRE-210ENST00000489333 FAM196AQ6ZSG2 479 aa10.85□□□□□ -0.67
GABRE-210ENST00000489333 TBC1D32Q96NH3 1257 aa10.85□□□□□ -0.67
GABRE-210ENST00000489333 CABP1Q9NZU7 370 aa10.85□□□□□ -0.67
GABRE-210ENST00000489333 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
GABRE-210ENST00000489333 DISP2A7MBM2 1401 aa10.84□□□□□ -0.67
GABRE-210ENST00000489333 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
GABRE-210ENST00000489333 COG3Q96JB2 828 aa10.84□□□□□ -0.67
GABRE-210ENST00000489333 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
GABRE-210ENST00000489333 RSPH6AQ9H0K4 717 aa10.84□□□□□ -0.67
GABRE-210ENST00000489333 PCDHB15Q9Y5E8 787 aa10.84□□□□□ -0.67
GABRE-210ENST00000489333 NUP188Q5SRE5 1749 aa10.84□□□□□ -0.67
GABRE-210ENST00000489333 PARP4Q9UKK3 1724 aaKnown RBP10.84□□□□□ -0.67
GABRE-210ENST00000489333 USP19O94966 1318 aa10.84□□□□□ -0.67
GABRE-210ENST00000489333 RREB1Q92766 1687 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 CPDO75976 1380 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 APBA3O96018 575 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 RLBP1P12271 317 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 TRIM27P14373 513 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 PTMSP20962 102 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 SSH1Q8WYL5 1049 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 ZBTB40Q9NUA8 1239 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 POLKQ9UBT6 870 aa10.83□□□□□ -0.68
GABRE-210ENST00000489333 LAS1LQ9Y4W2 734 aaKnown RBP10.83□□□□□ -0.68
GABRE-210ENST00000489333 RGPD5Q99666 1765 aa10.82□□□□□ -0.68
GABRE-210ENST00000489333 PIK3C2AO00443 1686 aa10.82□□□□□ -0.68
GABRE-210ENST00000489333 COL5A2P05997 1499 aaPredicted RBP10.82□□□□□ -0.68
GABRE-210ENST00000489333 WNK3Q9BYP7 1800 aa10.82□□□□□ -0.68
GABRE-210ENST00000489333 GCP02774 474 aa10.82□□□□□ -0.68
GABRE-210ENST00000489333 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
GABRE-210ENST00000489333 USP6P35125 1406 aa10.82□□□□□ -0.68
GABRE-210ENST00000489333 SBF2Q86WG5 1849 aa10.81□□□□□ -0.68
GABRE-210ENST00000489333 NLRP6P59044 892 aa10.81□□□□□ -0.68
GABRE-210ENST00000489333 CAMKK2Q96RR4 588 aa10.81□□□□□ -0.68
GABRE-210ENST00000489333 NOB1Q9ULX3 412 aaKnown RBP10.81□□□□□ -0.68
GABRE-210ENST00000489333 LRRC37A3O60309 1634 aa10.8□□□□□ -0.68
GABRE-210ENST00000489333 SLIT3O75094 1523 aa10.8□□□□□ -0.68
GABRE-210ENST00000489333 PRKAR2BP31323 418 aa10.8□□□□□ -0.68
GABRE-210ENST00000489333 IL13P35225 146 aa10.8□□□□□ -0.68
GABRE-210ENST00000489333 NUCB1Q02818 461 aa10.8□□□□□ -0.68
GABRE-210ENST00000489333 CRB1P82279 1406 aa10.8□□□□□ -0.68
GABRE-210ENST00000489333 SOS1Q07889 1333 aaPredicted RBP10.8□□□□□ -0.68
GABRE-210ENST00000489333 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
GABRE-210ENST00000489333 COL18A1P39060 1754 aa10.8□□□□□ -0.68
GABRE-210ENST00000489333 SOX12O15370 315 aa10.79□□□□□ -0.68
GABRE-210ENST00000489333 ZNF853P0CG23 659 aa10.79□□□□□ -0.68
GABRE-210ENST00000489333 BMP2KLQ5H9B9 411 aa10.79□□□□□ -0.68
GABRE-210ENST00000489333 TSR2Q969E8 191 aaKnown RBP10.79□□□□□ -0.68
GABRE-210ENST00000489333 CHMP4AQ9BY43 222 aa10.79□□□□□ -0.68
GABRE-210ENST00000489333 THRAP3Q9Y2W1 955 aaKnown RBP10.79□□□□□ -0.68
GABRE-210ENST00000489333 TTC21AQ8NDW8 1320 aa10.79□□□□□ -0.68
GABRE-210ENST00000489333 PEAK1Q9H792 1746 aa10.78□□□□□ -0.68
GABRE-210ENST00000489333 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
GABRE-210ENST00000489333 L1TD1Q5T7N2 865 aaKnown RBP10.78□□□□□ -0.68
GABRE-210ENST00000489333 TOM1L2Q6ZVM7 507 aa10.78□□□□□ -0.68
GABRE-210ENST00000489333 BCL2L13Q9BXK5 485 aa10.78□□□□□ -0.68
GABRE-210ENST00000489333 ISY1Q9ULR0 285 aaKnown RBP10.78□□□□□ -0.68
GABRE-210ENST00000489333 VAMP4O75379 141 aa10.77□□□□□ -0.69
GABRE-210ENST00000489333 RBM25P49756 843 aaKnown RBP10.77□□□□□ -0.69
GABRE-210ENST00000489333 TMEM57Q8N5G2 664 aa10.77□□□□□ -0.69
GABRE-210ENST00000489333 SNX21Q969T3 373 aa10.77□□□□□ -0.69
GABRE-210ENST00000489333 C22orf23Q9BZE7 217 aa10.77□□□□□ -0.69
GABRE-210ENST00000489333 CIZ1Q9ULV3 898 aaPredicted RBP10.77□□□□□ -0.69
GABRE-210ENST00000489333 ABCC4O15439 1325 aa10.77□□□□□ -0.69
GABRE-210ENST00000489333 OVOS2A0A0G2JMS6 1433 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 OVOS2A0A0J9YW53 1432 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 OVOS2Q6IE36 1432 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 CHD1LQ86WJ1 897 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 HSCBQ8IWL3 235 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 MRPL50Q8N5N7 158 aaKnown RBP10.76□□□□□ -0.69
GABRE-210ENST00000489333 CHMP5Q9NZZ3 219 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 PTPRCP08575 1304 aa10.76□□□□□ -0.69
GABRE-210ENST00000489333 RGPD3A6NKT7 1758 aaPredicted RBP10.75□□□□□ -0.69
GABRE-210ENST00000489333 RGPD4Q7Z3J3 1758 aa10.75□□□□□ -0.69
GABRE-210ENST00000489333 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
GABRE-210ENST00000489333 CSB-PGBD3P0DP91 1061 aa10.75□□□□□ -0.69
GABRE-210ENST00000489333 DDB1Q16531 1140 aa10.75□□□□□ -0.69
GABRE-210ENST00000489333 TWISTNBQ3B726 338 aaPredicted RBP10.75□□□□□ -0.69
GABRE-210ENST00000489333 SKAP1Q86WV1 359 aa10.75□□□□□ -0.69
GABRE-210ENST00000489333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
GABRE-210ENST00000489333 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms