RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
LMO4-203ENST00000489303 ASAP1Q9ULH1 1129 aa18.19■□□□□ 0.5
LMO4-203ENST00000489303 YBX3P16989 372 aaKnown RBP eCLIP18.18■□□□□ 0.55e-9■■■□□ 15.4
LMO4-203ENST00000489303 C1orf141Q5JVX7 400 aa18.18■□□□□ 0.5
LMO4-203ENST00000489303 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
LMO4-203ENST00000489303 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
LMO4-203ENST00000489303 PHF14O94880 888 aa18.17■□□□□ 0.5
LMO4-203ENST00000489303 KDRP35968 1356 aa18.17■□□□□ 0.5
LMO4-203ENST00000489303 UBR3Q6ZT12 1888 aa18.16■□□□□ 0.5
LMO4-203ENST00000489303 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
LMO4-203ENST00000489303 ITPK1Q13572 414 aa18.16■□□□□ 0.5
LMO4-203ENST00000489303 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
LMO4-203ENST00000489303 HMOX1P09601 288 aa18.15■□□□□ 0.5
LMO4-203ENST00000489303 LOC102724428A0A0B4J2F2 783 aa18.14■□□□□ 0.49
LMO4-203ENST00000489303 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.49
LMO4-203ENST00000489303 U2SURPO15042 1029 aaKnown RBP18.14■□□□□ 0.49
LMO4-203ENST00000489303 SIK1P57059 783 aa18.14■□□□□ 0.49
LMO4-203ENST00000489303 AK7Q96M32 723 aa18.14■□□□□ 0.49
LMO4-203ENST00000489303 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
LMO4-203ENST00000489303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
LMO4-203ENST00000489303 SLC4A9Q96Q91 983 aa18.13■□□□□ 0.49
LMO4-203ENST00000489303 WWC3Q9ULE0 1092 aa18.13■□□□□ 0.49
LMO4-203ENST00000489303 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
LMO4-203ENST00000489303 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
LMO4-203ENST00000489303 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
LMO4-203ENST00000489303 CABP4P57796 275 aa18.11■□□□□ 0.49
LMO4-203ENST00000489303 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
LMO4-203ENST00000489303 KDM6AO15550 1401 aaPredicted RBP18.09■□□□□ 0.49
LMO4-203ENST00000489303 GNPATO15228 680 aa18.09■□□□□ 0.49
LMO4-203ENST00000489303 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
LMO4-203ENST00000489303 CD2APQ9Y5K6 639 aa18.07■□□□□ 0.48
LMO4-203ENST00000489303 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
LMO4-203ENST00000489303 SSFA2P28290 1259 aa18.06■□□□□ 0.48
LMO4-203ENST00000489303 DDX10Q13206 875 aaKnown RBP18.06■□□□□ 0.48
LMO4-203ENST00000489303 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
LMO4-203ENST00000489303 MTHFSDQ2M296 383 aaKnown RBP18.05■□□□□ 0.48
LMO4-203ENST00000489303 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
LMO4-203ENST00000489303 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
LMO4-203ENST00000489303 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
LMO4-203ENST00000489303 NFATC2IPQ8NCF5 419 aa18.04■□□□□ 0.48
LMO4-203ENST00000489303 C1QTNF8P60827 252 aa18.03■□□□□ 0.48
LMO4-203ENST00000489303 RALBP1Q15311 655 aa18.03■□□□□ 0.48
LMO4-203ENST00000489303 RNMTO43148 476 aaKnown RBP18.02■□□□□ 0.48
LMO4-203ENST00000489303 GRIN3BO60391 1043 aa18.02■□□□□ 0.48
LMO4-203ENST00000489303 COL5A3P25940 1745 aaPredicted RBP18.02■□□□□ 0.48
LMO4-203ENST00000489303 PRKAR2BP31323 418 aa18.02■□□□□ 0.48
LMO4-203ENST00000489303 MYH14Q7Z406 1995 aaKnown RBP18.01■□□□□ 0.47
LMO4-203ENST00000489303 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
LMO4-203ENST00000489303 PTCD1O75127 700 aaKnown RBP18■□□□□ 0.47
LMO4-203ENST00000489303 FCHSD2O94868 740 aa18■□□□□ 0.47
LMO4-203ENST00000489303 NEFMP07197 916 aa18■□□□□ 0.47
LMO4-203ENST00000489303 MMP10P09238 476 aa18■□□□□ 0.47
LMO4-203ENST00000489303 ARHGEF1Q92888 912 aaKnown RBP18■□□□□ 0.47
LMO4-203ENST00000489303 RSPH6AQ9H0K4 717 aa18■□□□□ 0.47
LMO4-203ENST00000489303 LGR6Q9HBX8 967 aa18■□□□□ 0.47
LMO4-203ENST00000489303 SENP3-EIF4A1A0A087X0R7 540 aa17.99■□□□□ 0.47
LMO4-203ENST00000489303 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
LMO4-203ENST00000489303 RTCBQ9Y3I0 505 aaKnown RBP17.99■□□□□ 0.47
LMO4-203ENST00000489303 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
LMO4-203ENST00000489303 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
LMO4-203ENST00000489303 TRAPPC3LQ5T215 181 aa17.98■□□□□ 0.47
LMO4-203ENST00000489303 ZNF831Q5JPB2 1677 aa17.98■□□□□ 0.47
LMO4-203ENST00000489303 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
LMO4-203ENST00000489303 N4BP2Q86UW6 1770 aaPredicted RBP17.97■□□□□ 0.47
LMO4-203ENST00000489303 GIGYF1O75420 1035 aaPredicted RBP17.97■□□□□ 0.47
LMO4-203ENST00000489303 TEFQ10587 303 aa17.97■□□□□ 0.47
LMO4-203ENST00000489303 C4AP0C0L4 1744 aa17.97■□□□□ 0.47
LMO4-203ENST00000489303 TJP1Q07157 1748 aa17.97■□□□□ 0.47
LMO4-203ENST00000489303 RPS6KA4O75676 772 aa17.96■□□□□ 0.47
LMO4-203ENST00000489303 GYS1P13807 737 aa17.96■□□□□ 0.47
LMO4-203ENST00000489303 ZNF526Q8TF50 670 aaPredicted RBP17.96■□□□□ 0.47
LMO4-203ENST00000489303 PHACTR3Q96KR7 559 aa17.96■□□□□ 0.47
LMO4-203ENST00000489303 PNNQ9H307 717 aaKnown RBP17.96■□□□□ 0.47
LMO4-203ENST00000489303 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
LMO4-203ENST00000489303 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
LMO4-203ENST00000489303 CNTNAP4Q9C0A0 1308 aa17.96■□□□□ 0.46
LMO4-203ENST00000489303 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
LMO4-203ENST00000489303 RC3H1Q5TC82 1133 aaKnown RBP17.95■□□□□ 0.46
LMO4-203ENST00000489303 RTF1Q92541 710 aaKnown RBP17.95■□□□□ 0.46
LMO4-203ENST00000489303 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
LMO4-203ENST00000489303 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
LMO4-203ENST00000489303 TTC5Q8N0Z6 440 aa17.94■□□□□ 0.46
LMO4-203ENST00000489303 KIF13BQ9NQT8 1826 aa17.93■□□□□ 0.46
LMO4-203ENST00000489303 ADCY9O60503 1353 aa17.93■□□□□ 0.46
LMO4-203ENST00000489303 SLC39A6Q13433 755 aa17.93■□□□□ 0.46
LMO4-203ENST00000489303 MYBBP1AQ9BQG0 1328 aaKnown RBP17.93■□□□□ 0.46
LMO4-203ENST00000489303 RFC4P35249 363 aa17.92■□□□□ 0.46
LMO4-203ENST00000489303 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
LMO4-203ENST00000489303 MRC1P22897 1456 aa17.92■□□□□ 0.46
LMO4-203ENST00000489303 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
LMO4-203ENST00000489303 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
LMO4-203ENST00000489303 DPEP1P16444 411 aa17.91■□□□□ 0.46
LMO4-203ENST00000489303 ADRA2BP18089 450 aa17.91■□□□□ 0.46
LMO4-203ENST00000489303 FKBP8Q14318 412 aa17.91■□□□□ 0.46
LMO4-203ENST00000489303 INTS5Q6P9B9 1019 aaKnown RBP17.91■□□□□ 0.46
LMO4-203ENST00000489303 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
LMO4-203ENST00000489303 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
LMO4-203ENST00000489303 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
LMO4-203ENST00000489303 HTATSF1O43719 755 aaKnown RBP17.9■□□□□ 0.46
LMO4-203ENST00000489303 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms