RNA–Protein interactions for RNA: ENST00000489302.5

PDZD8-203, Transcript of PDZ domain containing 8, humanhuman

TSL 3

Gene PDZD8, Length 740 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-203ENST00000489302 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
PDZD8-203ENST00000489302 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
PDZD8-203ENST00000489302 PLEKHG2Q9H7P9 1386 aa13.7□□□□□ -0.22
PDZD8-203ENST00000489302 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
PDZD8-203ENST00000489302 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDZD8-203ENST00000489302 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
PDZD8-203ENST00000489302 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
PDZD8-203ENST00000489302 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
PDZD8-203ENST00000489302 PTGER2P43116 358 aa13.68□□□□□ -0.22
PDZD8-203ENST00000489302 ITPK1Q13572 414 aa13.68□□□□□ -0.22
PDZD8-203ENST00000489302 COL23A1Q86Y22 540 aaPredicted RBP13.68□□□□□ -0.22
PDZD8-203ENST00000489302 AK7Q96M32 723 aa13.68□□□□□ -0.22
PDZD8-203ENST00000489302 RNMTO43148 476 aaKnown RBP13.67□□□□□ -0.22
PDZD8-203ENST00000489302 PHF14O94880 888 aa13.67□□□□□ -0.22
PDZD8-203ENST00000489302 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
PDZD8-203ENST00000489302 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
PDZD8-203ENST00000489302 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
PDZD8-203ENST00000489302 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
PDZD8-203ENST00000489302 MSL1Q68DK7 614 aa13.66□□□□□ -0.22
PDZD8-203ENST00000489302 PHACTR3Q96KR7 559 aa13.66□□□□□ -0.22
PDZD8-203ENST00000489302 SLC4A9Q96Q91 983 aa13.66□□□□□ -0.22
PDZD8-203ENST00000489302 C5P01031 1676 aa13.66□□□□□ -0.22
PDZD8-203ENST00000489302 AMIGO3Q86WK7 504 aa13.65□□□□□ -0.22
PDZD8-203ENST00000489302 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
PDZD8-203ENST00000489302 SLC16A10Q8TF71 515 aa13.65□□□□□ -0.22
PDZD8-203ENST00000489302 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
PDZD8-203ENST00000489302 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
PDZD8-203ENST00000489302 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
PDZD8-203ENST00000489302 GNPATO15228 680 aa13.64□□□□□ -0.23
PDZD8-203ENST00000489302 HMGB2P26583 209 aaKnown RBP13.64□□□□□ -0.23
PDZD8-203ENST00000489302 SLC39A6Q13433 755 aa13.64□□□□□ -0.23
PDZD8-203ENST00000489302 ARXQ96QS3 562 aa13.64□□□□□ -0.23
PDZD8-203ENST00000489302 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
PDZD8-203ENST00000489302 TAF1LQ8IZX4 1826 aa13.63□□□□□ -0.23
PDZD8-203ENST00000489302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.63□□□□□ -0.23
PDZD8-203ENST00000489302 GNAT3A8MTJ3 354 aa13.63□□□□□ -0.23
PDZD8-203ENST00000489302 POLD1P28340 1107 aa13.63□□□□□ -0.23
PDZD8-203ENST00000489302 GAS2L2Q8NHY3 880 aa13.63□□□□□ -0.23
PDZD8-203ENST00000489302 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
PDZD8-203ENST00000489302 C4BP0C0L5 1744 aa13.63□□□□□ -0.23
PDZD8-203ENST00000489302 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
PDZD8-203ENST00000489302 IL17REQ8NFR9 667 aa13.62□□□□□ -0.23
PDZD8-203ENST00000489302 MAP3K5Q99683 1374 aa13.61□□□□□ -0.23
PDZD8-203ENST00000489302 SCN11AQ9UI33 1791 aa13.61□□□□□ -0.23
PDZD8-203ENST00000489302 FCHSD2O94868 740 aa13.61□□□□□ -0.23
PDZD8-203ENST00000489302 RALBP1Q15311 655 aa13.61□□□□□ -0.23
PDZD8-203ENST00000489302 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
PDZD8-203ENST00000489302 TEFQ10587 303 aa13.6□□□□□ -0.23
PDZD8-203ENST00000489302 QSER1Q2KHR3 1735 aa13.6□□□□□ -0.23
PDZD8-203ENST00000489302 SSFA2P28290 1259 aa13.59□□□□□ -0.23
PDZD8-203ENST00000489302 DNAJC10Q8IXB1 793 aa13.59□□□□□ -0.23
PDZD8-203ENST00000489302 RTCBQ9Y3I0 505 aaKnown RBP13.59□□□□□ -0.23
PDZD8-203ENST00000489302 NEFMP07197 916 aa13.58□□□□□ -0.24
PDZD8-203ENST00000489302 CRKLP46109 303 aaKnown RBP13.58□□□□□ -0.24
PDZD8-203ENST00000489302 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
PDZD8-203ENST00000489302 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
PDZD8-203ENST00000489302 MCM10Q7L590 875 aa13.58□□□□□ -0.24
PDZD8-203ENST00000489302 RC3H1Q5TC82 1133 aaKnown RBP13.57□□□□□ -0.24
PDZD8-203ENST00000489302 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
PDZD8-203ENST00000489302 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
PDZD8-203ENST00000489302 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
PDZD8-203ENST00000489302 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
PDZD8-203ENST00000489302 RPS6KA4O75676 772 aa13.56□□□□□ -0.24
PDZD8-203ENST00000489302 ARHGEF1Q92888 912 aaKnown RBP13.56□□□□□ -0.24
PDZD8-203ENST00000489302 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
PDZD8-203ENST00000489302 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
PDZD8-203ENST00000489302 MRC1P22897 1456 aa13.55□□□□□ -0.24
PDZD8-203ENST00000489302 KCNQ3O43525 872 aa13.55□□□□□ -0.24
PDZD8-203ENST00000489302 RFC4P35249 363 aa13.55□□□□□ -0.24
PDZD8-203ENST00000489302 BTBD11A6QL63 1104 aa13.54□□□□□ -0.24
PDZD8-203ENST00000489302 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
PDZD8-203ENST00000489302 INTS5Q6P9B9 1019 aaKnown RBP13.54□□□□□ -0.24
PDZD8-203ENST00000489302 ZNF790Q6PG37 636 aa13.54□□□□□ -0.24
PDZD8-203ENST00000489302 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
PDZD8-203ENST00000489302 NLGN2Q8NFZ4 835 aa13.54□□□□□ -0.24
PDZD8-203ENST00000489302 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
PDZD8-203ENST00000489302 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
PDZD8-203ENST00000489302 PRKRIP1Q9H875 184 aaPredicted RBP13.54□□□□□ -0.24
PDZD8-203ENST00000489302 CCDC87Q9NVE4 849 aa13.54□□□□□ -0.24
PDZD8-203ENST00000489302 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
PDZD8-203ENST00000489302 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
PDZD8-203ENST00000489302 SRP68Q9UHB9 627 aaKnown RBP13.53□□□□□ -0.24
PDZD8-203ENST00000489302 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
PDZD8-203ENST00000489302 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.24
PDZD8-203ENST00000489302 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.25
PDZD8-203ENST00000489302 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.25
PDZD8-203ENST00000489302 MIS18AQ9NYP9 233 aa13.52□□□□□ -0.25
PDZD8-203ENST00000489302 CEMIPQ8WUJ3 1361 aa13.52□□□□□ -0.25
PDZD8-203ENST00000489302 KCPQ6ZWJ8 1503 aa13.52□□□□□ -0.25
PDZD8-203ENST00000489302 ZNF831Q5JPB2 1677 aa13.52□□□□□ -0.25
PDZD8-203ENST00000489302 COL5A3P25940 1745 aaPredicted RBP13.52□□□□□ -0.25
PDZD8-203ENST00000489302 TJP1Q07157 1748 aa13.52□□□□□ -0.25
PDZD8-203ENST00000489302 MMP10P09238 476 aa13.51□□□□□ -0.25
PDZD8-203ENST00000489302 GYS1P13807 737 aa13.51□□□□□ -0.25
PDZD8-203ENST00000489302 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
PDZD8-203ENST00000489302 GPR162Q16538 588 aa13.51□□□□□ -0.25
PDZD8-203ENST00000489302 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
PDZD8-203ENST00000489302 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
PDZD8-203ENST00000489302 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
PDZD8-203ENST00000489302 ZBTB1Q9Y2K1 713 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms