RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ARID3AQ99856 593 aa12.25□□□□□ -0.45
TRAPPC12-221ENST00000489032 NEURL4Q96JN8 1562 aa12.25□□□□□ -0.45
TRAPPC12-221ENST00000489032 FBXO45P0C2W1 286 aa12.24□□□□□ -0.45
TRAPPC12-221ENST00000489032 BPHLQ86WA6 291 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC12-221ENST00000489032 PLEKHH2Q8IVE3 1493 aa12.24□□□□□ -0.45
TRAPPC12-221ENST00000489032 VWDEQ8N2E2 1590 aa12.24□□□□□ -0.45
TRAPPC12-221ENST00000489032 CD2BP2O95400 341 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-221ENST00000489032 HDGFL1Q5TGJ6 251 aa12.23□□□□□ -0.45
TRAPPC12-221ENST00000489032 POTEAQ6S8J7 498 aa12.23□□□□□ -0.45
TRAPPC12-221ENST00000489032 GLMNQ92990 594 aa12.23□□□□□ -0.45
TRAPPC12-221ENST00000489032 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
TRAPPC12-221ENST00000489032 GGT6Q6P531 493 aa12.22□□□□□ -0.45
TRAPPC12-221ENST00000489032 ANKLE2Q86XL3 938 aa12.22□□□□□ -0.45
TRAPPC12-221ENST00000489032 ZNF511Q8NB15 262 aa12.22□□□□□ -0.45
TRAPPC12-221ENST00000489032 PLSCR2Q9NRY7 297 aa12.22□□□□□ -0.45
TRAPPC12-221ENST00000489032 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
TRAPPC12-221ENST00000489032 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-221ENST00000489032 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
TRAPPC12-221ENST00000489032 RPIAP49247 311 aa12.21□□□□□ -0.45
TRAPPC12-221ENST00000489032 CARD14Q9BXL6 1004 aa12.21□□□□□ -0.45
TRAPPC12-221ENST00000489032 SAMD9LQ8IVG5 1584 aa12.21□□□□□ -0.46
TRAPPC12-221ENST00000489032 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
TRAPPC12-221ENST00000489032 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC12-221ENST00000489032 TRIM32Q13049 653 aa12.2□□□□□ -0.46
TRAPPC12-221ENST00000489032 MIA2Q96PC5 1412 aa12.2□□□□□ -0.46
TRAPPC12-221ENST00000489032 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
TRAPPC12-221ENST00000489032 HNRNPMP52272 730 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■□ 26.1
TRAPPC12-221ENST00000489032 CCDC82Q8N4S0 544 aa12.19□□□□□ -0.46
TRAPPC12-221ENST00000489032 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
TRAPPC12-221ENST00000489032 PCDHB9Q9Y5E1 797 aa12.19□□□□□ -0.46
TRAPPC12-221ENST00000489032 NPHP4O75161 1426 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC12-221ENST00000489032 LRRC7Q96NW7 1537 aa12.18□□□□□ -0.46
TRAPPC12-221ENST00000489032 SETD1AO15047 1707 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-221ENST00000489032 PLA2G2CQ5R387 149 aa12.18□□□□□ -0.46
TRAPPC12-221ENST00000489032 SH3BP5LQ7L8J4 393 aa12.18□□□□□ -0.46
TRAPPC12-221ENST00000489032 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-221ENST00000489032 PPARGC1BQ86YN6 1023 aaKnown RBP12.18□□□□□ -0.46
TRAPPC12-221ENST00000489032 ADAM32Q8TC27 787 aa12.18□□□□□ -0.46
TRAPPC12-221ENST00000489032 PLXNC1O60486 1568 aa12.18□□□□□ -0.46
TRAPPC12-221ENST00000489032 SYCP2Q9BX26 1530 aa12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 ZNF644Q9H582 1327 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 MED14O60244 1454 aa12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 A2MP01023 1474 aa12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 SH3BP2P78314 561 aa12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 FOXJ1Q92949 421 aa12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 SYNMO15061 1565 aa12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 TNRQ92752 1358 aa12.17□□□□□ -0.46
TRAPPC12-221ENST00000489032 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.463e-6■■■■□ 26.4
TRAPPC12-221ENST00000489032 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
TRAPPC12-221ENST00000489032 DEPDC5O75140 1603 aa12.16□□□□□ -0.46
TRAPPC12-221ENST00000489032 WNT7BP56706 349 aa12.16□□□□□ -0.46
TRAPPC12-221ENST00000489032 ALG2Q9H553 416 aa12.16□□□□□ -0.46
TRAPPC12-221ENST00000489032 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.46
TRAPPC12-221ENST00000489032 FGD6Q6ZV73 1430 aa12.15□□□□□ -0.46
TRAPPC12-221ENST00000489032 SLC19A1P41440 591 aa12.15□□□□□ -0.46
TRAPPC12-221ENST00000489032 IQGAP1P46940 1657 aa12.15□□□□□ -0.46
TRAPPC12-221ENST00000489032 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
TRAPPC12-221ENST00000489032 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
TRAPPC12-221ENST00000489032 SLC10A4Q96EP9 437 aa12.14□□□□□ -0.47
TRAPPC12-221ENST00000489032 FAM135AQ9P2D6 1515 aa12.13□□□□□ -0.47
TRAPPC12-221ENST00000489032 PTPN23Q9H3S7 1636 aa12.13□□□□□ -0.47
TRAPPC12-221ENST00000489032 A0A0G2JS52 829 aa12.13□□□□□ -0.47
TRAPPC12-221ENST00000489032 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-221ENST00000489032 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
TRAPPC12-221ENST00000489032 EHBP1Q8NDI1 1231 aa12.13□□□□□ -0.47
TRAPPC12-221ENST00000489032 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
TRAPPC12-221ENST00000489032 VARSP26640 1264 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-221ENST00000489032 LIAT1Q6ZQX7 453 aa12.12□□□□□ -0.47
TRAPPC12-221ENST00000489032 FAM174AQ8TBP5 190 aa12.12□□□□□ -0.47
TRAPPC12-221ENST00000489032 MBD5Q9P267 1494 aa12.12□□□□□ -0.47
TRAPPC12-221ENST00000489032 UGGT1Q9NYU2 1555 aa12.12□□□□□ -0.47
TRAPPC12-221ENST00000489032 INO80Q9ULG1 1556 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-221ENST00000489032 ADGBQ8N7X0 1667 aa12.11□□□□□ -0.47
TRAPPC12-221ENST00000489032 ARHGEF5Q12774 1597 aa12.11□□□□□ -0.47
TRAPPC12-221ENST00000489032 SLFNL1Q499Z3 407 aa12.11□□□□□ -0.47
TRAPPC12-221ENST00000489032 ADAMTS19Q8TE59 1207 aa12.11□□□□□ -0.47
TRAPPC12-221ENST00000489032 OCSTAMPQ9BR26 566 aa12.11□□□□□ -0.47
TRAPPC12-221ENST00000489032 PZPP20742 1482 aa12.1□□□□□ -0.47
TRAPPC12-221ENST00000489032 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
TRAPPC12-221ENST00000489032 ERFEQ4G0M1 354 aa12.1□□□□□ -0.47
TRAPPC12-221ENST00000489032 CDV3Q9UKY7 258 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-221ENST00000489032 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
TRAPPC12-221ENST00000489032 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
TRAPPC12-221ENST00000489032 SKOR1P84550 965 aa12.08□□□□□ -0.48
TRAPPC12-221ENST00000489032 C4orf48Q5BLP8 95 aa12.08□□□□□ -0.48
TRAPPC12-221ENST00000489032 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
TRAPPC12-221ENST00000489032 CEP126Q9P2H0 1117 aa12.08□□□□□ -0.48
TRAPPC12-221ENST00000489032 NBPF20Q3BBV1 942 aa12.07□□□□□ -0.48
TRAPPC12-221ENST00000489032 ARID5BQ14865 1188 aa12.06□□□□□ -0.48
TRAPPC12-221ENST00000489032 PRKD2Q9BZL6 878 aa12.06□□□□□ -0.48
TRAPPC12-221ENST00000489032 KDM5DQ9BY66 1539 aa12.06□□□□□ -0.48
TRAPPC12-221ENST00000489032 DAPK1P53355 1430 aa12.05□□□□□ -0.48
TRAPPC12-221ENST00000489032 XIRP1Q702N8 1843 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-221ENST00000489032 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
TRAPPC12-221ENST00000489032 SPRYD7Q5W111 196 aa12.05□□□□□ -0.48
TRAPPC12-221ENST00000489032 RNF135Q8IUD6 432 aa12.05□□□□□ -0.48
TRAPPC12-221ENST00000489032 PPP1R12CQ9BZL4 782 aa12.05□□□□□ -0.48
TRAPPC12-221ENST00000489032 WASHC2CQ9Y4E1 1318 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms