RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
FDPS-213ENST00000489003 MCM10Q7L590 875 aa20.03■□□□□ 0.8
FDPS-213ENST00000489003 RTF1Q92541 710 aaKnown RBP20.03■□□□□ 0.8
FDPS-213ENST00000489003 MIER1Q8N108 512 aa20.02■□□□□ 0.8
FDPS-213ENST00000489003 LRRC4BQ9NT99 713 aa20.02■□□□□ 0.8
FDPS-213ENST00000489003 RRP7AQ9Y3A4 280 aaKnown RBP20.02■□□□□ 0.8
FDPS-213ENST00000489003 CEMIPQ8WUJ3 1361 aa20.02■□□□□ 0.8
FDPS-213ENST00000489003 LY75O60449 1722 aa20.02■□□□□ 0.79
FDPS-213ENST00000489003 CCER2I3L3R5 266 aa20.01■□□□□ 0.79
FDPS-213ENST00000489003 KCNQ4P56696 695 aa20.01■□□□□ 0.79
FDPS-213ENST00000489003 NEUROD2Q15784 382 aa20.01■□□□□ 0.79
FDPS-213ENST00000489003 RREB1Q92766 1687 aa20■□□□□ 0.79
FDPS-213ENST00000489003 PALLDQ8WX93 1383 aa20■□□□□ 0.79
FDPS-213ENST00000489003 APAF1O14727 1248 aa20■□□□□ 0.79
FDPS-213ENST00000489003 TEFQ10587 303 aa20■□□□□ 0.79
FDPS-213ENST00000489003 SLC27A3Q5K4L6 730 aa20■□□□□ 0.79
FDPS-213ENST00000489003 FAM9BQ8IZU0 186 aa20■□□□□ 0.79
FDPS-213ENST00000489003 SLC39A6Q13433 755 aa19.99■□□□□ 0.79
FDPS-213ENST00000489003 CCNL1Q9UK58 526 aaPredicted RBP19.99■□□□□ 0.79
FDPS-213ENST00000489003 NBPF14Q5TI25 921 aa19.98■□□□□ 0.79
FDPS-213ENST00000489003 MRC1P22897 1456 aa19.98■□□□□ 0.79
FDPS-213ENST00000489003 NUP188Q5SRE5 1749 aa19.97■□□□□ 0.79
FDPS-213ENST00000489003 LOC102724428A0A0B4J2F2 783 aa19.97■□□□□ 0.79
FDPS-213ENST00000489003 SIK1P57059 783 aa19.97■□□□□ 0.79
FDPS-213ENST00000489003 SLC4A9Q96Q91 983 aa19.97■□□□□ 0.79
FDPS-213ENST00000489003 THUMPD2Q9BTF0 503 aaKnown RBP19.97■□□□□ 0.79
FDPS-213ENST00000489003 TRIM35Q9UPQ4 493 aa19.97■□□□□ 0.79
FDPS-213ENST00000489003 SIPA1L3O60292 1781 aaPredicted RBP19.96■□□□□ 0.79
FDPS-213ENST00000489003 TAF7Q15545 349 aaPredicted RBP19.96■□□□□ 0.79
FDPS-213ENST00000489003 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
FDPS-213ENST00000489003 BTBD11A6QL63 1104 aa19.94■□□□□ 0.78
FDPS-213ENST00000489003 KCNQ3O43525 872 aa19.94■□□□□ 0.78
FDPS-213ENST00000489003 PTCD1O75127 700 aaKnown RBP19.94■□□□□ 0.78
FDPS-213ENST00000489003 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
FDPS-213ENST00000489003 SENP3-EIF4A1A0A087X0R7 540 aa19.93■□□□□ 0.78
FDPS-213ENST00000489003 LMOD3Q0VAK6 560 aa19.93■□□□□ 0.78
FDPS-213ENST00000489003 ITPK1Q13572 414 aa19.93■□□□□ 0.78
FDPS-213ENST00000489003 ANO8Q9HCE9 1232 aaPredicted RBP19.93■□□□□ 0.78
FDPS-213ENST00000489003 MIS18AQ9NYP9 233 aa19.93■□□□□ 0.78
FDPS-213ENST00000489003 SLC15A2Q16348 729 aa19.92■□□□□ 0.78
FDPS-213ENST00000489003 ZNF790Q6PG37 636 aa19.92■□□□□ 0.78
FDPS-213ENST00000489003 PSDA5PKW4 1024 aaPredicted RBP19.91■□□□□ 0.78
FDPS-213ENST00000489003 R3HDM1Q15032 1099 aaKnown RBP19.91■□□□□ 0.78
FDPS-213ENST00000489003 TTC5Q8N0Z6 440 aa19.91■□□□□ 0.78
FDPS-213ENST00000489003 AKT1S1Q96B36 256 aa19.91■□□□□ 0.78
FDPS-213ENST00000489003 STK32BQ9NY57 414 aa19.91■□□□□ 0.78
FDPS-213ENST00000489003 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
FDPS-213ENST00000489003 ZNF827Q17R98 1081 aa19.9■□□□□ 0.78
FDPS-213ENST00000489003 HMGB2P26583 209 aaKnown RBP19.89■□□□□ 0.77
FDPS-213ENST00000489003 PAPPAQ13219 1627 aa19.89■□□□□ 0.77
FDPS-213ENST00000489003 LINC00116Q8NCU8 138 aa19.89■□□□□ 0.77
FDPS-213ENST00000489003 ZNF496Q96IT1 587 aaPredicted RBP19.89■□□□□ 0.77
FDPS-213ENST00000489003 ZNF831Q5JPB2 1677 aa19.87■□□□□ 0.77
FDPS-213ENST00000489003 KCPQ6ZWJ8 1503 aa19.87■□□□□ 0.77
FDPS-213ENST00000489003 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
FDPS-213ENST00000489003 DNAJC10Q8IXB1 793 aa19.87■□□□□ 0.77
FDPS-213ENST00000489003 VSIG10Q8N0Z9 540 aa19.87■□□□□ 0.77
FDPS-213ENST00000489003 UBR2Q8IWV8 1755 aa19.86■□□□□ 0.77
FDPS-213ENST00000489003 CCDC27Q2M243 656 aa19.86■□□□□ 0.77
FDPS-213ENST00000489003 FMNL2Q96PY5 1086 aa19.86■□□□□ 0.77
FDPS-213ENST00000489003 SALL2Q9Y467 1007 aaPredicted RBP19.86■□□□□ 0.77
FDPS-213ENST00000489003 C5P01031 1676 aa19.86■□□□□ 0.77
FDPS-213ENST00000489003 BABAM1Q9NWV8 329 aa19.85■□□□□ 0.77
FDPS-213ENST00000489003 HEG1Q9ULI3 1381 aa19.84■□□□□ 0.77
FDPS-213ENST00000489003 CHL1O00533 1208 aa19.84■□□□□ 0.77
FDPS-213ENST00000489003 RC3H1Q5TC82 1133 aaKnown RBP19.84■□□□□ 0.77
FDPS-213ENST00000489003 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
FDPS-213ENST00000489003 TFCP2L1Q9NZI6 479 aa19.84■□□□□ 0.77
FDPS-213ENST00000489003 C4BP0C0L5 1744 aa19.83■□□□□ 0.77
FDPS-213ENST00000489003 EIF4A1P60842 406 aaKnown RBP19.83■□□□□ 0.77
FDPS-213ENST00000489003 PDGFDQ9GZP0 370 aaPredicted RBP19.83■□□□□ 0.77
FDPS-213ENST00000489003 TSPYL4Q9UJ04 414 aa19.83■□□□□ 0.77
FDPS-213ENST00000489003 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.77
FDPS-213ENST00000489003 MYH14Q7Z406 1995 aaKnown RBP19.83■□□□□ 0.76
FDPS-213ENST00000489003 TJP1Q07157 1748 aa19.82■□□□□ 0.76
FDPS-213ENST00000489003 CYP19A1P11511 503 aaPredicted RBP19.82■□□□□ 0.76
FDPS-213ENST00000489003 CFAP44Q96MT7 982 aa19.82■□□□□ 0.76
FDPS-213ENST00000489003 TEX13AQ9BXU3 409 aaPredicted RBP19.82■□□□□ 0.76
FDPS-213ENST00000489003 KDM3BQ7LBC6 1761 aa19.82■□□□□ 0.76
FDPS-213ENST00000489003 PRAMEF22A3QJZ6 481 aa19.81■□□□□ 0.76
FDPS-213ENST00000489003 ZNF853P0CG23 659 aa19.81■□□□□ 0.76
FDPS-213ENST00000489003 INTS5Q6P9B9 1019 aaKnown RBP19.81■□□□□ 0.76
FDPS-213ENST00000489003 SMIM5Q71RC9 77 aa19.81■□□□□ 0.76
FDPS-213ENST00000489003 AMIGO3Q86WK7 504 aa19.81■□□□□ 0.76
FDPS-213ENST00000489003 AK7Q96M32 723 aa19.81■□□□□ 0.76
FDPS-213ENST00000489003 USP16Q9Y5T5 823 aa19.81■□□□□ 0.76
FDPS-213ENST00000489003 COL5A3P25940 1745 aaPredicted RBP19.81■□□□□ 0.76
FDPS-213ENST00000489003 SNRPA1P09661 255 aaKnown RBP19.8■□□□□ 0.76
FDPS-213ENST00000489003 CRKLP46109 303 aaKnown RBP19.8■□□□□ 0.76
FDPS-213ENST00000489003 COL23A1Q86Y22 540 aaPredicted RBP19.8■□□□□ 0.76
FDPS-213ENST00000489003 PNPLA7Q6ZV29 1317 aa19.79■□□□□ 0.76
FDPS-213ENST00000489003 CNTNAP4Q9C0A0 1308 aa19.79■□□□□ 0.76
FDPS-213ENST00000489003 TUBGCP6Q96RT7 1819 aa19.79■□□□□ 0.76
FDPS-213ENST00000489003 GNPATO15228 680 aa19.79■□□□□ 0.76
FDPS-213ENST00000489003 STARD3NLO95772 234 aa19.79■□□□□ 0.76
FDPS-213ENST00000489003 CALD1Q05682 793 aaKnown RBP19.79■□□□□ 0.76
FDPS-213ENST00000489003 CICQ96RK0 1608 aaPredicted RBP19.79■□□□□ 0.76
FDPS-213ENST00000489003 GIGYF1O75420 1035 aaPredicted RBP19.78■□□□□ 0.76
FDPS-213ENST00000489003 RPS6KA4O75676 772 aa19.78■□□□□ 0.76
FDPS-213ENST00000489003 GNAI1P63096 354 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms