RNA–Protein interactions for RNA: ENST00000488985.1

RPS6KA1-208, Transcript of ribosomal protein S6 kinase A1, human

TSL 3

Gene RPS6KA1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS6KA1-208	ENST00000488985	DOT1L	Q8TEK3	1739 aa		10.48	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	ERVV-2	B6SEH9	535 aa		10.48	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	KLHL34	Q8N239	644 aa		10.48	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	AKT1S1	Q96B36	256 aa		10.48	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.48	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	RCAN3	Q9UKA8	241 aa		10.48	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	SBF2	Q86WG5	1849 aa		10.48	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	RGPD2	P0DJD1	1756 aa		10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	BTAF1	O14981	1849 aa		10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	LOC102724428	A0A0B4J2F2	783 aa		10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	TCERG1	O14776	1098 aa	Known RBP	10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	SIK1	P57059	783 aa		10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	NCBP3	Q53F19	620 aa	Known RBP	10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	ERICH6	Q7L0X2	663 aa		10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	RBM42	Q9BTD8	480 aa	Known RBP	10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	KDR	P35968	1356 aa		10.47	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	ATP6V1A	P38606	617 aa		10.46	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	RRP1	P56182	461 aa	Known RBP	10.46	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	AKAP4	Q5JQC9	854 aa		10.46	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.46	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	FLAD1	Q8NFF5	587 aa		10.46	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	SLC16A10	Q8TF71	515 aa		10.46	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	ASAP1	Q9ULH1	1129 aa		10.46	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	PNPLA7	Q6ZV29	1317 aa		10.46	□□□□□ -0.73
RPS6KA1-208	ENST00000488985	PHF14	O94880	888 aa		10.45	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	NEFM	P07197	916 aa		10.45	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	ARX	Q96QS3	562 aa		10.45	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	PKD1L3	Q7Z443	1732 aa		10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	SHANK3	Q9BYB0	1731 aa		10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	GNPAT	O15228	680 aa		10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	PPP2R1A	P30153	589 aa		10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	GAS2L2	Q8NHY3	880 aa		10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	MAP2	P11137	1827 aa	Known RBP	10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	PAPPA	Q13219	1627 aa		10.44	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	KDM6A	O15550	1401 aa	Predicted RBP	10.43	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	PTCD1	O75127	700 aa	Known RBP	10.43	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	PTGER2	P43116	358 aa		10.43	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	AAMP	Q13685	434 aa		10.43	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	MTHFSD	Q2M296	383 aa	Known RBP	10.43	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	B4GALNT3	Q6L9W6	998 aa		10.43	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	ATG3	Q9NT62	314 aa		10.43	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	ANP32A	P39687	249 aa	Known RBP	10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	IRX6	P78412	446 aa	Predicted RBP	10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	TEF	Q10587	303 aa		10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	WDR43	Q15061	677 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	MSL1	Q68DK7	614 aa		10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	COL23A1	Q86Y22	540 aa	Predicted RBP	10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	TTC5	Q8N0Z6	440 aa		10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	NFATC2IP	Q8NCF5	419 aa		10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	LINC00116	Q8NCU8	138 aa		10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.42	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.41	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	SSFA2	P28290	1259 aa		10.41	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	PRKAR2B	P31323	418 aa		10.41	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	RTF1	Q92541	710 aa	Known RBP	10.41	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	SLC52A2	Q9HAB3	445 aa		10.41	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	RTCB	Q9Y3I0	505 aa	Known RBP	10.41	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	MAP3K5	Q99683	1374 aa		10.4	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	CASZ1	Q86V15	1759 aa		10.4	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	GNAT3	A8MTJ3	354 aa		10.4	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	RNMT	O43148	476 aa	Known RBP	10.4	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	ITPK1	Q13572	414 aa		10.4	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	COL3A1	P02461	1466 aa	Predicted RBP	10.4	□□□□□ -0.74
RPS6KA1-208	ENST00000488985	TOGARAM1	Q9Y4F4	1720 aa		10.39	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	KAT6B	Q8WYB5	2073 aa		10.39	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	TRAPPC3L	Q5T215	181 aa		10.39	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	SYT17	Q9BSW7	474 aa		10.39	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	LGR6	Q9HBX8	967 aa		10.39	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	MAPK8IP3	Q9UPT6	1336 aa		10.38	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	RFC4	P35249	363 aa		10.38	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	GOLGA2	Q08379	1002 aa		10.38	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	SGIP1	Q9BQI5	828 aa		10.38	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	RSPH6A	Q9H0K4	717 aa		10.38	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	PNN	Q9H307	717 aa	Known RBP	10.38	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	CNTNAP4	Q9C0A0	1308 aa		10.37	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	LY75	O60449	1722 aa		10.37	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	FCHSD2	O94868	740 aa		10.37	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	ADRA2B	P18089	450 aa		10.37	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	GPR162	Q16538	588 aa		10.37	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	NPM2	Q86SE8	214 aa	Known RBP	10.37	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	IPO9	Q96P70	1041 aa	Known RBP	10.37	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	CRKL	P46109	303 aa	Known RBP	10.36	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	SLC39A6	Q13433	755 aa		10.36	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	RC3H1	Q5TC82	1133 aa	Known RBP	10.36	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	SMIM5	Q71RC9	77 aa		10.36	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	C4B	P0C0L5	1744 aa		10.36	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	ZNF521	Q96K83	1311 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	C5	P01031	1676 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985		E9PSI1	815 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	RPS6KA4	O75676	772 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	YY1	P25490	414 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	DNAJC10	Q8IXB1	793 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	SLC4A9	Q96Q91	983 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	CCDC87	Q9NVE4	849 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	ADAMTS8	Q9UP79	889 aa		10.35	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	BTBD11	A6QL63	1104 aa		10.34	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	STARD3NL	O95772	234 aa		10.34	□□□□□ -0.75
RPS6KA1-208	ENST00000488985	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms