RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
CHD1L-208ENST00000488864 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
CHD1L-208ENST00000488864 IFT57Q9NWB7 429 aa16.92■□□□□ 0.3
CHD1L-208ENST00000488864 GNAI1P63096 354 aa16.92■□□□□ 0.3
CHD1L-208ENST00000488864 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
CHD1L-208ENST00000488864 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
CHD1L-208ENST00000488864 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
CHD1L-208ENST00000488864 EXOSC9Q06265 439 aaKnown RBP16.91■□□□□ 0.3
CHD1L-208ENST00000488864 VPS72Q15906 364 aa16.91■□□□□ 0.3
CHD1L-208ENST00000488864 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
CHD1L-208ENST00000488864 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
CHD1L-208ENST00000488864 PCDH11XQ9BZA7 1347 aa16.9■□□□□ 0.3
CHD1L-208ENST00000488864 PCDH11YQ9BZA8 1340 aa16.9■□□□□ 0.3
CHD1L-208ENST00000488864 A0A0G2JS52 829 aa16.9■□□□□ 0.3
CHD1L-208ENST00000488864 TEFQ10587 303 aa16.9■□□□□ 0.3
CHD1L-208ENST00000488864 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
CHD1L-208ENST00000488864 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
CHD1L-208ENST00000488864 KRT24Q2M2I5 525 aa16.89■□□□□ 0.29
CHD1L-208ENST00000488864 CEMIPQ8WUJ3 1361 aa16.89■□□□□ 0.29
CHD1L-208ENST00000488864 TSPYL4Q9UJ04 414 aa16.89■□□□□ 0.29
CHD1L-208ENST00000488864 EXOC5O00471 708 aa16.89■□□□□ 0.29
CHD1L-208ENST00000488864 CHL1O00533 1208 aa16.89■□□□□ 0.29
CHD1L-208ENST00000488864 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
CHD1L-208ENST00000488864 THRAP3Q9Y2W1 955 aaKnown RBP16.89■□□□□ 0.29
CHD1L-208ENST00000488864 PKD1L3Q7Z443 1732 aa16.89■□□□□ 0.29
CHD1L-208ENST00000488864 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
CHD1L-208ENST00000488864 RGS3P49796 1198 aa16.88■□□□□ 0.29
CHD1L-208ENST00000488864 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
CHD1L-208ENST00000488864 DDB1Q16531 1140 aa16.87■□□□□ 0.29
CHD1L-208ENST00000488864 TSPYL6Q8N831 410 aa16.87■□□□□ 0.29
CHD1L-208ENST00000488864 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
CHD1L-208ENST00000488864 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
CHD1L-208ENST00000488864 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
CHD1L-208ENST00000488864 BARGINQ6ZT62 677 aa16.86■□□□□ 0.29
CHD1L-208ENST00000488864 C8orf58Q8NAV2 365 aa16.86■□□□□ 0.29
CHD1L-208ENST00000488864 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
CHD1L-208ENST00000488864 QTRT2Q9H974 415 aaKnown RBP16.86■□□□□ 0.29
CHD1L-208ENST00000488864 KCNQ3O43525 872 aa16.85■□□□□ 0.29
CHD1L-208ENST00000488864 KAT6BQ8WYB5 2073 aa16.85■□□□□ 0.29
CHD1L-208ENST00000488864 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
CHD1L-208ENST00000488864 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
CHD1L-208ENST00000488864 TRPC5Q9UL62 973 aaPredicted RBP16.85■□□□□ 0.29
CHD1L-208ENST00000488864 PLEKHG2Q9H7P9 1386 aa16.84■□□□□ 0.29
CHD1L-208ENST00000488864 BCAR3O75815 825 aa16.84■□□□□ 0.29
CHD1L-208ENST00000488864 CDCA7Q9BWT1 371 aaPredicted RBP16.84■□□□□ 0.29
CHD1L-208ENST00000488864 LRRC37A3O60309 1634 aa16.84■□□□□ 0.29
CHD1L-208ENST00000488864 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
CHD1L-208ENST00000488864 SLC52A2Q9HAB3 445 aa16.84■□□□□ 0.29
CHD1L-208ENST00000488864 CABP4P57796 275 aa16.83■□□□□ 0.28
CHD1L-208ENST00000488864 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
CHD1L-208ENST00000488864 EP400Q96L91 3159 aa16.83■□□□□ 0.28
CHD1L-208ENST00000488864 VIRMAQ69YN4 1812 aaKnown RBP16.83■□□□□ 0.28
CHD1L-208ENST00000488864 TNS2Q63HR2 1409 aa16.82■□□□□ 0.28
CHD1L-208ENST00000488864 TWISTNBQ3B726 338 aaPredicted RBP16.82■□□□□ 0.28
CHD1L-208ENST00000488864 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
CHD1L-208ENST00000488864 MARCH10Q8NA82 808 aaPredicted RBP16.81■□□□□ 0.28
CHD1L-208ENST00000488864 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
CHD1L-208ENST00000488864 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.81■□□□□ 0.28
CHD1L-208ENST00000488864 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
CHD1L-208ENST00000488864 ATRNO75882 1429 aa16.81■□□□□ 0.28
CHD1L-208ENST00000488864 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
CHD1L-208ENST00000488864 SCN11AQ9UI33 1791 aa16.81■□□□□ 0.28
CHD1L-208ENST00000488864 VAMP4O75379 141 aa16.8■□□□□ 0.28
CHD1L-208ENST00000488864 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
CHD1L-208ENST00000488864 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
CHD1L-208ENST00000488864 GLI3P10071 1580 aa16.8■□□□□ 0.28
CHD1L-208ENST00000488864 NECTIN2Q92692 538 aa16.79■□□□□ 0.28
CHD1L-208ENST00000488864 ADAMTS7Q9UKP4 1686 aa16.79■□□□□ 0.28
CHD1L-208ENST00000488864 SSH1Q8WYL5 1049 aa16.78■□□□□ 0.28
CHD1L-208ENST00000488864 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
CHD1L-208ENST00000488864 ERVV-2B6SEH9 535 aa16.78■□□□□ 0.28
CHD1L-208ENST00000488864 IGHDP01880 384 aa16.78■□□□□ 0.28
CHD1L-208ENST00000488864 EIF4A1P60842 406 aaKnown RBP16.78■□□□□ 0.28
CHD1L-208ENST00000488864 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
CHD1L-208ENST00000488864 ZNF790Q6PG37 636 aa16.77■□□□□ 0.28
CHD1L-208ENST00000488864 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
CHD1L-208ENST00000488864 SEPT12Q8IYM1 358 aa16.77■□□□□ 0.27
CHD1L-208ENST00000488864 CT47B1P0C2W7 299 aaPredicted RBP16.76■□□□□ 0.27
CHD1L-208ENST00000488864 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
CHD1L-208ENST00000488864 ZNF772Q68DY9 489 aaPredicted RBP16.76■□□□□ 0.27
CHD1L-208ENST00000488864 TMOD3Q9NYL9 352 aa16.76■□□□□ 0.27
CHD1L-208ENST00000488864 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
CHD1L-208ENST00000488864 PIGBQ92521 554 aa16.76■□□□□ 0.27
CHD1L-208ENST00000488864 SEC24BO95487 1268 aa16.75■□□□□ 0.27
CHD1L-208ENST00000488864 TOGARAM1Q9Y4F4 1720 aa16.75■□□□□ 0.27
CHD1L-208ENST00000488864 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
CHD1L-208ENST00000488864 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
CHD1L-208ENST00000488864 MRC1P22897 1456 aa16.74■□□□□ 0.27
CHD1L-208ENST00000488864 EIF2S2P20042 333 aaKnown RBP16.74■□□□□ 0.27
CHD1L-208ENST00000488864 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
CHD1L-208ENST00000488864 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
CHD1L-208ENST00000488864 KCNQ2O43526 872 aa16.73■□□□□ 0.27
CHD1L-208ENST00000488864 ONECUT3O60422 494 aaPredicted RBP16.73■□□□□ 0.27
CHD1L-208ENST00000488864 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
CHD1L-208ENST00000488864 RGS17Q9UGC6 210 aaPredicted RBP16.73■□□□□ 0.27
CHD1L-208ENST00000488864 ASAP1Q9ULH1 1129 aa16.73■□□□□ 0.27
CHD1L-208ENST00000488864 KDM3BQ7LBC6 1761 aa16.73■□□□□ 0.27
CHD1L-208ENST00000488864 TNNQ9UQP3 1299 aa16.72■□□□□ 0.27
CHD1L-208ENST00000488864 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
CHD1L-208ENST00000488864 THSD7AQ9UPZ6 1657 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms