RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TMOD3Q9NYL9 352 aa16.08■□□□□ 0.16
TRAIP-209ENST00000488860 ERVV-2B6SEH9 535 aa16.07■□□□□ 0.16
TRAIP-209ENST00000488860 PRIM1P49642 420 aaKnown RBP16.07■□□□□ 0.16
TRAIP-209ENST00000488860 WDR63Q8IWG1 891 aa16.07■□□□□ 0.16
TRAIP-209ENST00000488860 BCL9O00512 1426 aa16.07■□□□□ 0.16
TRAIP-209ENST00000488860 EP400Q96L91 3159 aa16.07■□□□□ 0.16
TRAIP-209ENST00000488860 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
TRAIP-209ENST00000488860 FAM196AQ6ZSG2 479 aa16.06■□□□□ 0.16
TRAIP-209ENST00000488860 NFATC2IPQ8NCF5 419 aa16.06■□□□□ 0.16
TRAIP-209ENST00000488860 C5P01031 1676 aa16.05■□□□□ 0.16
TRAIP-209ENST00000488860 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
TRAIP-209ENST00000488860 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
TRAIP-209ENST00000488860 IL16Q14005 1332 aa16.04■□□□□ 0.16
TRAIP-209ENST00000488860 KCNQ2O43526 872 aa16.04■□□□□ 0.16
TRAIP-209ENST00000488860 GNAI1P63096 354 aa16.04■□□□□ 0.16
TRAIP-209ENST00000488860 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
TRAIP-209ENST00000488860 TSR2Q969E8 191 aaKnown RBP16.04■□□□□ 0.16
TRAIP-209ENST00000488860 CDCA7LQ96GN5 454 aa16.04■□□□□ 0.16
TRAIP-209ENST00000488860 IFT57Q9NWB7 429 aa16.04■□□□□ 0.16
TRAIP-209ENST00000488860 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
TRAIP-209ENST00000488860 LAMB4A4D0S4 1761 aa16.04■□□□□ 0.16
TRAIP-209ENST00000488860 LY75O60449 1722 aa16.03■□□□□ 0.16
TRAIP-209ENST00000488860 PIGBQ92521 554 aa16.03■□□□□ 0.16
TRAIP-209ENST00000488860 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
TRAIP-209ENST00000488860 FANCIQ9NVI1 1328 aa16.02■□□□□ 0.16
TRAIP-209ENST00000488860 E9PSI1 815 aa16.02■□□□□ 0.16
TRAIP-209ENST00000488860 TRIM37O94972 964 aa16.02■□□□□ 0.16
TRAIP-209ENST00000488860 SLC39A6Q13433 755 aa16.02■□□□□ 0.16
TRAIP-209ENST00000488860 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
TRAIP-209ENST00000488860 MYH16Q9H6N6 1097 aa16.02■□□□□ 0.16
TRAIP-209ENST00000488860 MBIPQ9NS73 344 aa16.02■□□□□ 0.16
TRAIP-209ENST00000488860 KCPQ6ZWJ8 1503 aa16.02■□□□□ 0.15
TRAIP-209ENST00000488860 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
TRAIP-209ENST00000488860 TTC5Q8N0Z6 440 aa16.01■□□□□ 0.15
TRAIP-209ENST00000488860 TJP1Q07157 1748 aa16.01■□□□□ 0.15
TRAIP-209ENST00000488860 KCNQ3O43525 872 aa16■□□□□ 0.15
TRAIP-209ENST00000488860 ZNF853P0CG23 659 aa16■□□□□ 0.15
TRAIP-209ENST00000488860 SLFN5Q08AF3 891 aa16■□□□□ 0.15
TRAIP-209ENST00000488860 RGPD3A6NKT7 1758 aaPredicted RBP16■□□□□ 0.15
TRAIP-209ENST00000488860 RGPD4Q7Z3J3 1758 aa16■□□□□ 0.15
TRAIP-209ENST00000488860 CHL1O00533 1208 aa15.99■□□□□ 0.15
TRAIP-209ENST00000488860 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
TRAIP-209ENST00000488860 PALLDQ8WX93 1383 aa15.99■□□□□ 0.15
TRAIP-209ENST00000488860 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
TRAIP-209ENST00000488860 ZNF790Q6PG37 636 aa15.98■□□□□ 0.15
TRAIP-209ENST00000488860 BCL11BQ9C0K0 894 aaPredicted RBP15.98■□□□□ 0.15
TRAIP-209ENST00000488860 ATG3Q9NT62 314 aa15.98■□□□□ 0.15
TRAIP-209ENST00000488860 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
TRAIP-209ENST00000488860 COL5A3P25940 1745 aaPredicted RBP15.97■□□□□ 0.15
TRAIP-209ENST00000488860 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
TRAIP-209ENST00000488860 CICQ96RK0 1608 aaPredicted RBP15.97■□□□□ 0.15
TRAIP-209ENST00000488860 ZNF831Q5JPB2 1677 aa15.96■□□□□ 0.15
TRAIP-209ENST00000488860 PTCD1O75127 700 aaKnown RBP15.96■□□□□ 0.15
TRAIP-209ENST00000488860 KRT24Q2M2I5 525 aa15.96■□□□□ 0.15
TRAIP-209ENST00000488860 DUSP27Q5VZP5 1158 aa15.96■□□□□ 0.15
TRAIP-209ENST00000488860 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
TRAIP-209ENST00000488860 SMARCC1Q92922 1105 aaPredicted RBP15.95■□□□□ 0.14
TRAIP-209ENST00000488860 FMNL2Q96PY5 1086 aa15.95■□□□□ 0.14
TRAIP-209ENST00000488860 APBA3O96018 575 aa15.94■□□□□ 0.14
TRAIP-209ENST00000488860 EIF4A1P60842 406 aaKnown RBP15.94■□□□□ 0.14
TRAIP-209ENST00000488860 ZNF496Q96IT1 587 aaPredicted RBP15.94■□□□□ 0.14
TRAIP-209ENST00000488860 HEG1Q9ULI3 1381 aa15.94■□□□□ 0.14
TRAIP-209ENST00000488860 RREB1Q92766 1687 aa15.93■□□□□ 0.14
TRAIP-209ENST00000488860 ELL2O00472 640 aaPredicted RBP15.93■□□□□ 0.14
TRAIP-209ENST00000488860 SF3B2Q13435 895 aaKnown RBP15.93■□□□□ 0.14
TRAIP-209ENST00000488860 TRMT2AQ8IZ69 625 aaKnown RBP15.93■□□□□ 0.14
TRAIP-209ENST00000488860 C8orf58Q8NAV2 365 aa15.92■□□□□ 0.14
TRAIP-209ENST00000488860 NUP188Q5SRE5 1749 aa15.91■□□□□ 0.14
TRAIP-209ENST00000488860 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
TRAIP-209ENST00000488860 LOC102724428A0A0B4J2F2 783 aa15.91■□□□□ 0.14
TRAIP-209ENST00000488860 PRAMEF22A3QJZ6 481 aa15.91■□□□□ 0.14
TRAIP-209ENST00000488860 SIK1P57059 783 aa15.91■□□□□ 0.14
TRAIP-209ENST00000488860 TWISTNBQ3B726 338 aaPredicted RBP15.91■□□□□ 0.14
TRAIP-209ENST00000488860 ILDR2Q71H61 639 aa15.91■□□□□ 0.14
TRAIP-209ENST00000488860 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
TRAIP-209ENST00000488860 NECTIN2Q92692 538 aa15.9■□□□□ 0.14
TRAIP-209ENST00000488860 CCNL1Q9UK58 526 aaPredicted RBP15.9■□□□□ 0.14
TRAIP-209ENST00000488860 C4BP0C0L5 1744 aa15.9■□□□□ 0.14
TRAIP-209ENST00000488860 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
TRAIP-209ENST00000488860 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
TRAIP-209ENST00000488860 KCNQ4P56696 695 aa15.89■□□□□ 0.13
TRAIP-209ENST00000488860 MYH14Q7Z406 1995 aaKnown RBP15.89■□□□□ 0.13
TRAIP-209ENST00000488860 TUBGCP6Q96RT7 1819 aa15.89■□□□□ 0.13
TRAIP-209ENST00000488860 GIGYF1O75420 1035 aaPredicted RBP15.88■□□□□ 0.13
TRAIP-209ENST00000488860 EIF2S2P20042 333 aaKnown RBP15.88■□□□□ 0.13
TRAIP-209ENST00000488860 BAG6P46379 1132 aa15.88■□□□□ 0.13
TRAIP-209ENST00000488860 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
TRAIP-209ENST00000488860 SLC4A9Q96Q91 983 aa15.88■□□□□ 0.13
TRAIP-209ENST00000488860 HDGFL1Q5TGJ6 251 aa15.87■□□□□ 0.13
TRAIP-209ENST00000488860 VSIG10Q8N0Z9 540 aa15.87■□□□□ 0.13
TRAIP-209ENST00000488860 TCERG1O14776 1098 aaKnown RBP15.86■□□□□ 0.13
TRAIP-209ENST00000488860 HOXB7P09629 217 aa15.86■□□□□ 0.13
TRAIP-209ENST00000488860 EN1Q05925 392 aaPredicted RBP15.86■□□□□ 0.13
TRAIP-209ENST00000488860 ITPK1Q13572 414 aa15.86■□□□□ 0.13
TRAIP-209ENST00000488860 UBR3Q6ZT12 1888 aa15.85■□□□□ 0.13
TRAIP-209ENST00000488860 PLSCR1O15162 318 aa15.85■□□□□ 0.13
TRAIP-209ENST00000488860 VAMP4O75379 141 aa15.85■□□□□ 0.13
TRAIP-209ENST00000488860 TXNRD1Q16881 649 aa15.85■□□□□ 0.13
TRAIP-209ENST00000488860 DEFB132Q7Z7B7 95 aa15.85■□□□□ 0.13
TRAIP-209ENST00000488860 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms