RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 IL17REQ8NFR9 667 aa8.78□□□□□ -1
PTPRD-212ENST00000488774 ATG3Q9NT62 314 aa8.78□□□□□ -1
PTPRD-212ENST00000488774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -1
PTPRD-212ENST00000488774 SPG7Q9UQ90 795 aa8.78□□□□□ -1
PTPRD-212ENST00000488774 LRP5O75197 1615 aa8.78□□□□□ -1
PTPRD-212ENST00000488774 MYBBP1AQ9BQG0 1328 aaKnown RBP8.78□□□□□ -1
PTPRD-212ENST00000488774 KCNQ3O43525 872 aa8.77□□□□□ -1.01
PTPRD-212ENST00000488774 U2AF1L5P0DN76 240 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-212ENST00000488774 U2AF1Q01081 240 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTPRD-212ENST00000488774 SF3B2Q13435 895 aaKnown RBP8.77□□□□□ -1.01
PTPRD-212ENST00000488774 PLEKHO1Q53GL0 409 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-212ENST00000488774 PALLDQ8WX93 1383 aa8.76□□□□□ -1.01
PTPRD-212ENST00000488774 RNMTO43148 476 aaKnown RBP8.76□□□□□ -1.01
PTPRD-212ENST00000488774 SLC39A6Q13433 755 aa8.76□□□□□ -1.01
PTPRD-212ENST00000488774 RALBP1Q15311 655 aa8.76□□□□□ -1.01
PTPRD-212ENST00000488774 CCDC146Q8IYE0 955 aa8.76□□□□□ -1.01
PTPRD-212ENST00000488774 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
PTPRD-212ENST00000488774 LINC00116Q8NCU8 138 aa8.76□□□□□ -1.01
PTPRD-212ENST00000488774 AKT1S1Q96B36 256 aa8.76□□□□□ -1.01
PTPRD-212ENST00000488774 THUMPD2Q9BTF0 503 aaKnown RBP8.76□□□□□ -1.01
PTPRD-212ENST00000488774 MCM10Q7L590 875 aa8.75□□□□□ -1.01
PTPRD-212ENST00000488774 CEMIPQ8WUJ3 1361 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 MAP3K5Q99683 1374 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 PLEKHG2Q9H7P9 1386 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 LAMB4A4D0S4 1761 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 AKAP4Q5JQC9 854 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 DCAF5Q96JK2 942 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 RRP7AQ9Y3A4 280 aaKnown RBP8.74□□□□□ -1.01
PTPRD-212ENST00000488774 PNPLA7Q6ZV29 1317 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 KIAA1551Q9HCM1 1747 aa8.74□□□□□ -1.01
PTPRD-212ENST00000488774 AFDNP55196 1824 aaKnown RBP8.73□□□□□ -1.01
PTPRD-212ENST00000488774 PRAMEF22A3QJZ6 481 aa8.73□□□□□ -1.01
PTPRD-212ENST00000488774 AMOTQ4VCS5 1084 aa8.73□□□□□ -1.01
PTPRD-212ENST00000488774 CFAP53Q96M91 514 aa8.73□□□□□ -1.01
PTPRD-212ENST00000488774 SLC52A2Q9HAB3 445 aa8.73□□□□□ -1.01
PTPRD-212ENST00000488774 TMOD3Q9NYL9 352 aa8.73□□□□□ -1.01
PTPRD-212ENST00000488774 LOC102724428A0A0B4J2F2 783 aa8.72□□□□□ -1.01
PTPRD-212ENST00000488774 ERVV-2B6SEH9 535 aa8.72□□□□□ -1.01
PTPRD-212ENST00000488774 FCHSD2O94868 740 aa8.72□□□□□ -1.01
PTPRD-212ENST00000488774 SIK1P57059 783 aa8.72□□□□□ -1.01
PTPRD-212ENST00000488774 SLC15A2Q16348 729 aa8.72□□□□□ -1.01
PTPRD-212ENST00000488774 MIS18AQ9NYP9 233 aa8.72□□□□□ -1.01
PTPRD-212ENST00000488774 CCNL1Q9UK58 526 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-212ENST00000488774 BCORQ6W2J9 1755 aa8.71□□□□□ -1.01
PTPRD-212ENST00000488774 GNAT3A8MTJ3 354 aa8.71□□□□□ -1.02
PTPRD-212ENST00000488774 PTCD1O75127 700 aaKnown RBP8.71□□□□□ -1.02
PTPRD-212ENST00000488774 ZBTB7AO95365 584 aa8.71□□□□□ -1.02
PTPRD-212ENST00000488774 CABP4P57796 275 aa8.71□□□□□ -1.02
PTPRD-212ENST00000488774 C1orf141Q5JVX7 400 aa8.71□□□□□ -1.02
PTPRD-212ENST00000488774 TRIM35Q9UPQ4 493 aa8.71□□□□□ -1.02
PTPRD-212ENST00000488774 PTGER2P43116 358 aa8.7□□□□□ -1.02
PTPRD-212ENST00000488774 COL23A1Q86Y22 540 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-212ENST00000488774 SGIP1Q9BQI5 828 aa8.7□□□□□ -1.02
PTPRD-212ENST00000488774 N4BP2Q86UW6 1770 aaPredicted RBP8.7□□□□□ -1.02
PTPRD-212ENST00000488774 NUP98P52948 1817 aa8.7□□□□□ -1.02
PTPRD-212ENST00000488774 KIF13BQ9NQT8 1826 aa8.69□□□□□ -1.02
PTPRD-212ENST00000488774 TMPOP42166 694 aaKnown RBP8.69□□□□□ -1.02
PTPRD-212ENST00000488774 NFE2L2Q16236 605 aa8.69□□□□□ -1.02
PTPRD-212ENST00000488774 DNAJC10Q8IXB1 793 aa8.69□□□□□ -1.02
PTPRD-212ENST00000488774 PNISRQ8TF01 805 aaKnown RBP8.69□□□□□ -1.02
PTPRD-212ENST00000488774 ZNF496Q96IT1 587 aaPredicted RBP8.69□□□□□ -1.02
PTPRD-212ENST00000488774 RBM42Q9BTD8 480 aaKnown RBP8.69□□□□□ -1.02
PTPRD-212ENST00000488774 NUDCQ9Y266 331 aa8.69□□□□□ -1.02
PTPRD-212ENST00000488774 ATF5Q9Y2D1 282 aaPredicted RBP8.69□□□□□ -1.02
PTPRD-212ENST00000488774 SCN7AQ01118 1682 aa8.69□□□□□ -1.02
PTPRD-212ENST00000488774 BRCA1P38398 1863 aaKnown RBP8.68□□□□□ -1.02
PTPRD-212ENST00000488774 ANKRD31Q8N7Z5 1873 aa8.68□□□□□ -1.02
PTPRD-212ENST00000488774 KCNA4P22459 653 aa8.68□□□□□ -1.02
PTPRD-212ENST00000488774 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
PTPRD-212ENST00000488774 PIP4K2AP48426 406 aaPredicted RBP8.68□□□□□ -1.02
PTPRD-212ENST00000488774 KRT24Q2M2I5 525 aa8.68□□□□□ -1.02
PTPRD-212ENST00000488774 SLC27A3Q5K4L6 730 aa8.68□□□□□ -1.02
PTPRD-212ENST00000488774 INTS5Q6P9B9 1019 aaKnown RBP8.68□□□□□ -1.02
PTPRD-212ENST00000488774 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
PTPRD-212ENST00000488774 PHF14O94880 888 aa8.67□□□□□ -1.02
PTPRD-212ENST00000488774 HSP90AB1P08238 724 aaKnown RBP8.67□□□□□ -1.02
PTPRD-212ENST00000488774 CACNA1SQ13698 1873 aa8.67□□□□□ -1.02
PTPRD-212ENST00000488774 NEUROD2Q15784 382 aa8.67□□□□□ -1.02
PTPRD-212ENST00000488774 MSL1Q68DK7 614 aa8.67□□□□□ -1.02
PTPRD-212ENST00000488774 STK32BQ9NY57 414 aa8.67□□□□□ -1.02
PTPRD-212ENST00000488774 NRXN2Q9P2S2 1712 aa8.66□□□□□ -1.02
PTPRD-212ENST00000488774 APAF1O14727 1248 aa8.66□□□□□ -1.02
PTPRD-212ENST00000488774 CYP19A1P11511 503 aaPredicted RBP8.66□□□□□ -1.02
PTPRD-212ENST00000488774 CRKLP46109 303 aaKnown RBP8.66□□□□□ -1.02
PTPRD-212ENST00000488774 RIPK4P57078 832 aa8.66□□□□□ -1.02
PTPRD-212ENST00000488774 ZNF790Q6PG37 636 aa8.66□□□□□ -1.02
PTPRD-212ENST00000488774 SMARCC1Q92922 1105 aaPredicted RBP8.66□□□□□ -1.02
PTPRD-212ENST00000488774 SRP68Q9UHB9 627 aaKnown RBP8.66□□□□□ -1.02
PTPRD-212ENST00000488774 USP16Q9Y5T5 823 aa8.66□□□□□ -1.02
PTPRD-212ENST00000488774 HEG1Q9ULI3 1381 aa8.65□□□□□ -1.02
PTPRD-212ENST00000488774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.65□□□□□ -1.02
PTPRD-212ENST00000488774 GNPATO15228 680 aa8.65□□□□□ -1.02
PTPRD-212ENST00000488774 NBPF14Q5TI25 921 aa8.65□□□□□ -1.02
PTPRD-212ENST00000488774 PPP4R3CPQ6ZMV5 832 aa8.65□□□□□ -1.02
PTPRD-212ENST00000488774 MIER1Q8N108 512 aa8.65□□□□□ -1.02
PTPRD-212ENST00000488774 RUNDC1Q96C34 613 aa8.65□□□□□ -1.02
PTPRD-212ENST00000488774 MRS2Q9HD23 443 aa8.65□□□□□ -1.02
PTPRD-212ENST00000488774 TFCP2L1Q9NZI6 479 aa8.65□□□□□ -1.02
PTPRD-212ENST00000488774 ZBTB1Q9Y2K1 713 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms