RNA–Protein interactions for RNA: ENST00000488648.5

SKIV2L-212, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 720 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-212ENST00000488648 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
SKIV2L-212ENST00000488648 THUMPD2Q9BTF0 503 aaKnown RBP16.17■□□□□ 0.18
SKIV2L-212ENST00000488648 IL16Q14005 1332 aa16.17■□□□□ 0.18
SKIV2L-212ENST00000488648 PRIM1P49642 420 aaKnown RBP16.16■□□□□ 0.18
SKIV2L-212ENST00000488648 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
SKIV2L-212ENST00000488648 GNAI1P63096 354 aa16.15■□□□□ 0.18
SKIV2L-212ENST00000488648 TAF7Q15545 349 aaPredicted RBP16.15■□□□□ 0.18
SKIV2L-212ENST00000488648 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
SKIV2L-212ENST00000488648 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
SKIV2L-212ENST00000488648 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
SKIV2L-212ENST00000488648 RGPD3A6NKT7 1758 aaPredicted RBP16.15■□□□□ 0.18
SKIV2L-212ENST00000488648 RGPD4Q7Z3J3 1758 aa16.15■□□□□ 0.18
SKIV2L-212ENST00000488648 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
SKIV2L-212ENST00000488648 TTC5Q8N0Z6 440 aa16.14■□□□□ 0.17
SKIV2L-212ENST00000488648 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
SKIV2L-212ENST00000488648 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
SKIV2L-212ENST00000488648 BABAM1Q9NWV8 329 aa16.14■□□□□ 0.17
SKIV2L-212ENST00000488648 ZNF521Q96K83 1311 aa16.14■□□□□ 0.17
SKIV2L-212ENST00000488648 BTBD11A6QL63 1104 aa16.13■□□□□ 0.17
SKIV2L-212ENST00000488648 TRIM37O94972 964 aa16.13■□□□□ 0.17
SKIV2L-212ENST00000488648 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
SKIV2L-212ENST00000488648 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
SKIV2L-212ENST00000488648 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
SKIV2L-212ENST00000488648 PIGBQ92521 554 aa16.12■□□□□ 0.17
SKIV2L-212ENST00000488648 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
SKIV2L-212ENST00000488648 LY75O60449 1722 aa16.11■□□□□ 0.17
SKIV2L-212ENST00000488648 E9PSI1 815 aa16.11■□□□□ 0.17
SKIV2L-212ENST00000488648 KCNQ2O43526 872 aa16.11■□□□□ 0.17
SKIV2L-212ENST00000488648 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
SKIV2L-212ENST00000488648 ZNF831Q5JPB2 1677 aa16.1■□□□□ 0.17
SKIV2L-212ENST00000488648 ZNF790Q6PG37 636 aa16.09■□□□□ 0.17
SKIV2L-212ENST00000488648 PALLDQ8WX93 1383 aa16.09■□□□□ 0.17
SKIV2L-212ENST00000488648 CHL1O00533 1208 aa16.08■□□□□ 0.16
SKIV2L-212ENST00000488648 CCDC125Q86Z20 511 aa16.08■□□□□ 0.16
SKIV2L-212ENST00000488648 MBIPQ9NS73 344 aa16.08■□□□□ 0.16
SKIV2L-212ENST00000488648 KCPQ6ZWJ8 1503 aa16.08■□□□□ 0.16
SKIV2L-212ENST00000488648 CICQ96RK0 1608 aaPredicted RBP16.08■□□□□ 0.16
SKIV2L-212ENST00000488648 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
SKIV2L-212ENST00000488648 SLC39A6Q13433 755 aa16.07■□□□□ 0.16
SKIV2L-212ENST00000488648 FMNL2Q96PY5 1086 aa16.07■□□□□ 0.16
SKIV2L-212ENST00000488648 ATG3Q9NT62 314 aa16.07■□□□□ 0.16
SKIV2L-212ENST00000488648 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
SKIV2L-212ENST00000488648 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
SKIV2L-212ENST00000488648 C5P01031 1676 aa16.06■□□□□ 0.16
SKIV2L-212ENST00000488648 APBA3O96018 575 aa16.06■□□□□ 0.16
SKIV2L-212ENST00000488648 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
SKIV2L-212ENST00000488648 TSR2Q969E8 191 aaKnown RBP16.06■□□□□ 0.16
SKIV2L-212ENST00000488648 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
SKIV2L-212ENST00000488648 MIS18AQ9NYP9 233 aa16.06■□□□□ 0.16
SKIV2L-212ENST00000488648 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
SKIV2L-212ENST00000488648 TJP1Q07157 1748 aa16.05■□□□□ 0.16
SKIV2L-212ENST00000488648 BAG6P46379 1132 aa16.05■□□□□ 0.16
SKIV2L-212ENST00000488648 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
SKIV2L-212ENST00000488648 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
SKIV2L-212ENST00000488648 PTF1AQ7RTS3 328 aa16.04■□□□□ 0.16
SKIV2L-212ENST00000488648 COL5A3P25940 1745 aaPredicted RBP16.04■□□□□ 0.16
SKIV2L-212ENST00000488648 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
SKIV2L-212ENST00000488648 SOS1Q07889 1333 aaPredicted RBP16.03■□□□□ 0.16
SKIV2L-212ENST00000488648 EIF4A1P60842 406 aaKnown RBP16.03■□□□□ 0.16
SKIV2L-212ENST00000488648 CDCA7LQ96GN5 454 aa16.03■□□□□ 0.16
SKIV2L-212ENST00000488648 ZNF496Q96IT1 587 aaPredicted RBP16.03■□□□□ 0.16
SKIV2L-212ENST00000488648 CHMP4AQ9BY43 222 aa16.03■□□□□ 0.16
SKIV2L-212ENST00000488648 RREB1Q92766 1687 aa16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 CACNA1FO60840 1977 aa16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 EP400Q96L91 3159 aa16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 PLSCR1O15162 318 aa16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 SIK1P57059 783 aa16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 VSIG10Q8N0Z9 540 aa16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 CCNL1Q9UK58 526 aaPredicted RBP16.02■□□□□ 0.16
SKIV2L-212ENST00000488648 KCNQ3O43525 872 aa16.01■□□□□ 0.15
SKIV2L-212ENST00000488648 HOXB7P09629 217 aa16.01■□□□□ 0.15
SKIV2L-212ENST00000488648 SLC27A3Q5K4L6 730 aa16.01■□□□□ 0.15
SKIV2L-212ENST00000488648 TEX13AQ9BXU3 409 aaPredicted RBP16.01■□□□□ 0.15
SKIV2L-212ENST00000488648 ATP6V1AP38606 617 aa16■□□□□ 0.15
SKIV2L-212ENST00000488648 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
SKIV2L-212ENST00000488648 ILDR2Q71H61 639 aa16■□□□□ 0.15
SKIV2L-212ENST00000488648 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
SKIV2L-212ENST00000488648 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
SKIV2L-212ENST00000488648 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
SKIV2L-212ENST00000488648 GIGYF1O75420 1035 aaPredicted RBP15.98■□□□□ 0.15
SKIV2L-212ENST00000488648 STARD3NLO95772 234 aa15.98■□□□□ 0.15
SKIV2L-212ENST00000488648 C4BP0C0L5 1744 aa15.98■□□□□ 0.15
SKIV2L-212ENST00000488648 CT47B1P0C2W7 299 aaPredicted RBP15.98■□□□□ 0.15
SKIV2L-212ENST00000488648 TWISTNBQ3B726 338 aaPredicted RBP15.98■□□□□ 0.15
SKIV2L-212ENST00000488648 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
SKIV2L-212ENST00000488648 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
SKIV2L-212ENST00000488648 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
SKIV2L-212ENST00000488648 EN1Q05925 392 aaPredicted RBP15.96■□□□□ 0.15
SKIV2L-212ENST00000488648 KRT24Q2M2I5 525 aa15.96■□□□□ 0.15
SKIV2L-212ENST00000488648 HDGFL1Q5TGJ6 251 aa15.96■□□□□ 0.15
SKIV2L-212ENST00000488648 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
SKIV2L-212ENST00000488648 C8orf58Q8NAV2 365 aa15.96■□□□□ 0.15
SKIV2L-212ENST00000488648 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
SKIV2L-212ENST00000488648 ZNF428Q96B54 188 aa15.95■□□□□ 0.14
SKIV2L-212ENST00000488648 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
SKIV2L-212ENST00000488648 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
SKIV2L-212ENST00000488648 EIF2S2P20042 333 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms