RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ATG3Q9NT62 314 aa31.66■■■□□ 2.66
RHBDD3-205ENST00000488106 TJP1Q07157 1748 aa31.63■■■□□ 2.65
RHBDD3-205ENST00000488106 LOC102724428A0A0B4J2F2 783 aa31.63■■■□□ 2.65
RHBDD3-205ENST00000488106 SIK1P57059 783 aa31.63■■■□□ 2.65
RHBDD3-205ENST00000488106 LGR6Q9HBX8 967 aa31.63■■■□□ 2.65
RHBDD3-205ENST00000488106 TFCP2L1Q9NZI6 479 aa31.63■■■□□ 2.65
RHBDD3-205ENST00000488106 MAP3K5Q99683 1374 aa31.63■■■□□ 2.65
RHBDD3-205ENST00000488106 ZBTB7AO95365 584 aa31.62■■■□□ 2.65
RHBDD3-205ENST00000488106 NFATC2IPQ8NCF5 419 aa31.62■■■□□ 2.65
RHBDD3-205ENST00000488106 GAS2L2Q8NHY3 880 aa31.62■■■□□ 2.65
RHBDD3-205ENST00000488106 UBR2Q8IWV8 1755 aa31.61■■■□□ 2.65
RHBDD3-205ENST00000488106 MYBBP1AQ9BQG0 1328 aaKnown RBP31.61■■■□□ 2.65
RHBDD3-205ENST00000488106 RNMTO43148 476 aaKnown RBP31.61■■■□□ 2.65
RHBDD3-205ENST00000488106 PHACTR3Q96KR7 559 aa31.61■■■□□ 2.65
RHBDD3-205ENST00000488106 SPON1Q9HCB6 807 aa31.61■■■□□ 2.65
RHBDD3-205ENST00000488106 MYH14Q7Z406 1995 aaKnown RBP31.59■■■□□ 2.65
RHBDD3-205ENST00000488106 PNPLA7Q6ZV29 1317 aa31.59■■■□□ 2.65
RHBDD3-205ENST00000488106 COL24A1Q17RW2 1714 aa31.59■■■□□ 2.65
RHBDD3-205ENST00000488106 CICQ96RK0 1608 aaPredicted RBP31.59■■■□□ 2.65
RHBDD3-205ENST00000488106 ZNF316A6NFI3 1004 aaPredicted RBP31.58■■■□□ 2.65
RHBDD3-205ENST00000488106 RBM42Q9BTD8 480 aaKnown RBP31.58■■■□□ 2.65
RHBDD3-205ENST00000488106 SLC52A2Q9HAB3 445 aa31.58■■■□□ 2.65
RHBDD3-205ENST00000488106 FCHSD2O94868 740 aa31.57■■■□□ 2.64
RHBDD3-205ENST00000488106 ATP6V1AP38606 617 aa31.57■■■□□ 2.64
RHBDD3-205ENST00000488106 GNAT3A8MTJ3 354 aa31.56■■■□□ 2.64
RHBDD3-205ENST00000488106 ATF5Q9Y2D1 282 aaPredicted RBP31.56■■■□□ 2.64
RHBDD3-205ENST00000488106 ITPK1Q13572 414 aa31.55■■■□□ 2.64
RHBDD3-205ENST00000488106 LINC00116Q8NCU8 138 aa31.55■■■□□ 2.64
RHBDD3-205ENST00000488106 AK7Q96M32 723 aa31.54■■■□□ 2.64
RHBDD3-205ENST00000488106 PRKRIP1Q9H875 184 aaPredicted RBP31.53■■■□□ 2.64
RHBDD3-205ENST00000488106 PTCD1O75127 700 aaKnown RBP31.52■■■□□ 2.64
RHBDD3-205ENST00000488106 HMGB2P26583 209 aaKnown RBP31.52■■■□□ 2.64
RHBDD3-205ENST00000488106 MTFR1LQ9H019 292 aa31.52■■■□□ 2.64
RHBDD3-205ENST00000488106 MSH5O43196 834 aa31.51■■■□□ 2.63
RHBDD3-205ENST00000488106 SLC4A9Q96Q91 983 aa31.51■■■□□ 2.63
RHBDD3-205ENST00000488106 PPP1R1BQ9UD71 204 aaPredicted RBP31.51■■■□□ 2.63
RHBDD3-205ENST00000488106 KCPQ6ZWJ8 1503 aa31.5■■■□□ 2.63
RHBDD3-205ENST00000488106 C4AP0C0L4 1744 aa31.5■■■□□ 2.63
RHBDD3-205ENST00000488106 SLC39A6Q13433 755 aa31.48■■■□□ 2.63
RHBDD3-205ENST00000488106 COL23A1Q86Y22 540 aaPredicted RBP31.48■■■□□ 2.63
RHBDD3-205ENST00000488106 IL17REQ8NFR9 667 aa31.48■■■□□ 2.63
RHBDD3-205ENST00000488106 PHF14O94880 888 aa31.47■■■□□ 2.63
RHBDD3-205ENST00000488106 NEFMP07197 916 aa31.47■■■□□ 2.63
RHBDD3-205ENST00000488106 TEFQ10587 303 aa31.47■■■□□ 2.63
RHBDD3-205ENST00000488106 PTGER2P43116 358 aa31.46■■■□□ 2.63
RHBDD3-205ENST00000488106 AMIGO3Q86WK7 504 aa31.46■■■□□ 2.63
RHBDD3-205ENST00000488106 SMIM5Q71RC9 77 aa31.45■■■□□ 2.63
RHBDD3-205ENST00000488106 CEMIPQ8WUJ3 1361 aa31.44■■■□□ 2.62
RHBDD3-205ENST00000488106 GNPATO15228 680 aa31.44■■■□□ 2.62
RHBDD3-205ENST00000488106 SLC16A10Q8TF71 515 aa31.44■■■□□ 2.62
RHBDD3-205ENST00000488106 MAPK8IP3Q9UPT6 1336 aa31.43■■■□□ 2.62
RHBDD3-205ENST00000488106 RTF1Q92541 710 aaKnown RBP31.42■■■□□ 2.62
RHBDD3-205ENST00000488106 PLEKHF1Q96S99 279 aa31.42■■■□□ 2.62
RHBDD3-205ENST00000488106 MCM10Q7L590 875 aa31.41■■■□□ 2.62
RHBDD3-205ENST00000488106 FLAD1Q8NFF5 587 aa31.41■■■□□ 2.62
RHBDD3-205ENST00000488106 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.4■■■□□ 2.62
RHBDD3-205ENST00000488106 SGIP1Q9BQI5 828 aa31.4■■■□□ 2.62
RHBDD3-205ENST00000488106 KDM3BQ7LBC6 1761 aa31.39■■■□□ 2.62
RHBDD3-205ENST00000488106 TTC5Q8N0Z6 440 aa31.39■■■□□ 2.62
RHBDD3-205ENST00000488106 PNNQ9H307 717 aaKnown RBP31.39■■■□□ 2.62
RHBDD3-205ENST00000488106 CNTNAP4Q9C0A0 1308 aa31.39■■■□□ 2.62
RHBDD3-205ENST00000488106 SSFA2P28290 1259 aa31.38■■■□□ 2.61
RHBDD3-205ENST00000488106 DCTN1Q14203 1278 aa31.38■■■□□ 2.61
RHBDD3-205ENST00000488106 WDR43Q15061 677 aaKnown RBP eCLIP31.38■■■□□ 2.61
RHBDD3-205ENST00000488106 MSL1Q68DK7 614 aa31.38■■■□□ 2.61
RHBDD3-205ENST00000488106 NFE2L2Q16236 605 aa31.35■■■□□ 2.61
RHBDD3-205ENST00000488106 DNAJC10Q8IXB1 793 aa31.35■■■□□ 2.61
RHBDD3-205ENST00000488106 POLD1P28340 1107 aa31.34■■■□□ 2.61
RHBDD3-205ENST00000488106 CRKLP46109 303 aaKnown RBP31.34■■■□□ 2.61
RHBDD3-205ENST00000488106 RTCBQ9Y3I0 505 aaKnown RBP31.34■■■□□ 2.61
RHBDD3-205ENST00000488106 HTATSF1O43719 755 aaKnown RBP31.33■■■□□ 2.61
RHBDD3-205ENST00000488106 RC3H1Q5TC82 1133 aaKnown RBP31.33■■■□□ 2.61
RHBDD3-205ENST00000488106 ZNF790Q6PG37 636 aa31.33■■■□□ 2.61
RHBDD3-205ENST00000488106 ARXQ96QS3 562 aa31.33■■■□□ 2.61
RHBDD3-205ENST00000488106 BTBD11A6QL63 1104 aa31.32■■■□□ 2.6
RHBDD3-205ENST00000488106 CCDC146Q8IYE0 955 aa31.32■■■□□ 2.6
RHBDD3-205ENST00000488106 LAMB4A4D0S4 1761 aa31.31■■■□□ 2.6
RHBDD3-205ENST00000488106 ZNF496Q96IT1 587 aaPredicted RBP31.3■■■□□ 2.6
RHBDD3-205ENST00000488106 FHDC1Q9C0D6 1143 aaPredicted RBP31.29■■■□□ 2.6
RHBDD3-205ENST00000488106 KCNQ3O43525 872 aa31.28■■■□□ 2.6
RHBDD3-205ENST00000488106 RPS6KA4O75676 772 aa31.28■■■□□ 2.6
RHBDD3-205ENST00000488106 HEG1Q9ULI3 1381 aa31.28■■■□□ 2.6
RHBDD3-205ENST00000488106 TRAPPC3LQ5T215 181 aa31.27■■■□□ 2.6
RHBDD3-205ENST00000488106 VSIG10Q8N0Z9 540 aa31.27■■■□□ 2.6
RHBDD3-205ENST00000488106 KLHL34Q8N239 644 aa31.27■■■□□ 2.6
RHBDD3-205ENST00000488106 CCDC87Q9NVE4 849 aa31.27■■■□□ 2.6
RHBDD3-205ENST00000488106 CYP19A1P11511 503 aaPredicted RBP31.26■■■□□ 2.59
RHBDD3-205ENST00000488106 THUMPD2Q9BTF0 503 aaKnown RBP31.26■■■□□ 2.59
RHBDD3-205ENST00000488106 ADAMTS8Q9UP79 889 aa31.26■■■□□ 2.59
RHBDD3-205ENST00000488106 ANP32CO43423 234 aa31.25■■■□□ 2.59
RHBDD3-205ENST00000488106 ADRA2BP18089 450 aa31.25■■■□□ 2.59
RHBDD3-205ENST00000488106 INTS5Q6P9B9 1019 aaKnown RBP31.25■■■□□ 2.59
RHBDD3-205ENST00000488106 FMNL2Q96PY5 1086 aa31.25■■■□□ 2.59
RHBDD3-205ENST00000488106 ARHGEF1Q92888 912 aaKnown RBP31.24■■■□□ 2.59
RHBDD3-205ENST00000488106 RIPK4P57078 832 aa31.23■■■□□ 2.59
RHBDD3-205ENST00000488106 RRP7AQ9Y3A4 280 aaKnown RBP31.23■■■□□ 2.59
RHBDD3-205ENST00000488106 RFC4P35249 363 aa31.22■■■□□ 2.59
RHBDD3-205ENST00000488106 TMPOP42166 694 aaKnown RBP31.22■■■□□ 2.59
RHBDD3-205ENST00000488106 CCDC184Q52MB2 194 aa31.22■■■□□ 2.59
RHBDD3-205ENST00000488106 RUNDC1Q96C34 613 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms