RNA–Protein interactions for RNA: ENST00000488061.5

PDE6B-211, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-211ENST00000488061 GOLGB1Q14789 3259 aaKnown RBP24.07■■□□□ 1.44
PDE6B-211ENST00000488061 COL24A1Q17RW2 1714 aa24.07■■□□□ 1.44
PDE6B-211ENST00000488061 ADAMTS7Q9UKP4 1686 aa24.05■■□□□ 1.44
PDE6B-211ENST00000488061 GIGYF1O75420 1035 aaPredicted RBP24.05■■□□□ 1.44
PDE6B-211ENST00000488061 HMOX1P09601 288 aa24.05■■□□□ 1.44
PDE6B-211ENST00000488061 CNGB1Q14028 1251 aaPredicted RBP24.04■■□□□ 1.44
PDE6B-211ENST00000488061 SLC16A10Q8TF71 515 aa24.04■■□□□ 1.44
PDE6B-211ENST00000488061 RALBP1Q15311 655 aa24.03■■□□□ 1.44
PDE6B-211ENST00000488061 U2SURPO15042 1029 aaKnown RBP24.02■■□□□ 1.44
PDE6B-211ENST00000488061 TUBGCP6Q96RT7 1819 aa24.01■■□□□ 1.43
PDE6B-211ENST00000488061 CABP4P57796 275 aa24.01■■□□□ 1.43
PDE6B-211ENST00000488061 KLHL34Q8N239 644 aa24.01■■□□□ 1.43
PDE6B-211ENST00000488061 VIRMAQ69YN4 1812 aaKnown RBP24■■□□□ 1.43
PDE6B-211ENST00000488061 MRC1P22897 1456 aa24■■□□□ 1.43
PDE6B-211ENST00000488061 LOC102724428A0A0B4J2F2 783 aa24■■□□□ 1.43
PDE6B-211ENST00000488061 SIK1P57059 783 aa24■■□□□ 1.43
PDE6B-211ENST00000488061 ATG3Q9NT62 314 aa24■■□□□ 1.43
PDE6B-211ENST00000488061 C4BP0C0L5 1744 aa23.99■■□□□ 1.43
PDE6B-211ENST00000488061 MTHFSDQ2M296 383 aaKnown RBP23.99■■□□□ 1.43
PDE6B-211ENST00000488061 GAS2L2Q8NHY3 880 aa23.99■■□□□ 1.43
PDE6B-211ENST00000488061 PNPLA7Q6ZV29 1317 aa23.99■■□□□ 1.43
PDE6B-211ENST00000488061 CICQ96RK0 1608 aaPredicted RBP23.99■■□□□ 1.43
PDE6B-211ENST00000488061 FCHSD2O94868 740 aa23.98■■□□□ 1.43
PDE6B-211ENST00000488061 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
PDE6B-211ENST00000488061 PELP1Q8IZL8 1130 aaKnown RBP23.98■■□□□ 1.43
PDE6B-211ENST00000488061 FLAD1Q8NFF5 587 aa23.98■■□□□ 1.43
PDE6B-211ENST00000488061 NLGN2Q8NFZ4 835 aa23.98■■□□□ 1.43
PDE6B-211ENST00000488061 TFCP2L1Q9NZI6 479 aa23.98■■□□□ 1.43
PDE6B-211ENST00000488061 ASAP1Q9ULH1 1129 aa23.98■■□□□ 1.43
PDE6B-211ENST00000488061 RSPH6AQ9H0K4 717 aa23.97■■□□□ 1.43
PDE6B-211ENST00000488061 POLD1P28340 1107 aa23.96■■□□□ 1.43
PDE6B-211ENST00000488061 KCNQ4P56696 695 aa23.96■■□□□ 1.43
PDE6B-211ENST00000488061 RNMTO43148 476 aaKnown RBP23.94■■□□□ 1.42
PDE6B-211ENST00000488061 NFATC2IPQ8NCF5 419 aa23.94■■□□□ 1.42
PDE6B-211ENST00000488061 SLC52A2Q9HAB3 445 aa23.94■■□□□ 1.42
PDE6B-211ENST00000488061 U2AF1L5P0DN76 240 aaPredicted RBP23.93■■□□□ 1.42
PDE6B-211ENST00000488061 U2AF1Q01081 240 aaKnown RBP eCLIP23.93■■□□□ 1.42
PDE6B-211ENST00000488061 UBR3Q6ZT12 1888 aa23.93■■□□□ 1.42
PDE6B-211ENST00000488061 YBX3P16989 372 aaKnown RBP eCLIP23.92■■□□□ 1.42
PDE6B-211ENST00000488061 PRKAR2BP31323 418 aa23.92■■□□□ 1.42
PDE6B-211ENST00000488061 ATP6V1AP38606 617 aa23.92■■□□□ 1.42
PDE6B-211ENST00000488061 COL5A3P25940 1745 aaPredicted RBP23.92■■□□□ 1.42
PDE6B-211ENST00000488061 GNAT3A8MTJ3 354 aa23.91■■□□□ 1.42
PDE6B-211ENST00000488061 AK7Q96M32 723 aa23.9■■□□□ 1.42
PDE6B-211ENST00000488061 LGR6Q9HBX8 967 aa23.9■■□□□ 1.42
PDE6B-211ENST00000488061 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.42
PDE6B-211ENST00000488061 SSFA2P28290 1259 aa23.89■■□□□ 1.41
PDE6B-211ENST00000488061 RC3H1Q5TC82 1133 aaKnown RBP23.89■■□□□ 1.41
PDE6B-211ENST00000488061 PNNQ9H307 717 aaKnown RBP23.89■■□□□ 1.41
PDE6B-211ENST00000488061 ITPK1Q13572 414 aa23.88■■□□□ 1.41
PDE6B-211ENST00000488061 LINC00116Q8NCU8 138 aa23.88■■□□□ 1.41
PDE6B-211ENST00000488061 CEMIPQ8WUJ3 1361 aa23.88■■□□□ 1.41
PDE6B-211ENST00000488061 SIPA1L3O60292 1781 aaPredicted RBP23.88■■□□□ 1.41
PDE6B-211ENST00000488061 COL23A1Q86Y22 540 aaPredicted RBP23.87■■□□□ 1.41
PDE6B-211ENST00000488061 PHACTR3Q96KR7 559 aa23.87■■□□□ 1.41
PDE6B-211ENST00000488061 CNTNAP4Q9C0A0 1308 aa23.86■■□□□ 1.41
PDE6B-211ENST00000488061 HTATSF1O43719 755 aaKnown RBP23.86■■□□□ 1.41
PDE6B-211ENST00000488061 SLC4A9Q96Q91 983 aa23.86■■□□□ 1.41
PDE6B-211ENST00000488061 UBR2Q8IWV8 1755 aa23.86■■□□□ 1.41
PDE6B-211ENST00000488061 ATP10DQ9P241 1426 aa23.85■■□□□ 1.41
PDE6B-211ENST00000488061 GRIN3BO60391 1043 aa23.85■■□□□ 1.41
PDE6B-211ENST00000488061 NEFMP07197 916 aa23.85■■□□□ 1.41
PDE6B-211ENST00000488061 RBM42Q9BTD8 480 aaKnown RBP23.85■■□□□ 1.41
PDE6B-211ENST00000488061 TJP1Q07157 1748 aa23.84■■□□□ 1.41
PDE6B-211ENST00000488061 VSIG10Q8N0Z9 540 aa23.84■■□□□ 1.41
PDE6B-211ENST00000488061 IL17REQ8NFR9 667 aa23.84■■□□□ 1.41
PDE6B-211ENST00000488061 ADRA2BP18089 450 aa23.83■■□□□ 1.41
PDE6B-211ENST00000488061 TEFQ10587 303 aa23.82■■□□□ 1.4
PDE6B-211ENST00000488061 KCPQ6ZWJ8 1503 aa23.82■■□□□ 1.4
PDE6B-211ENST00000488061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.81■■□□□ 1.4
PDE6B-211ENST00000488061 PRKRIP1Q9H875 184 aaPredicted RBP23.81■■□□□ 1.4
PDE6B-211ENST00000488061 GNPATO15228 680 aa23.8■■□□□ 1.4
PDE6B-211ENST00000488061 PTCD1O75127 700 aaKnown RBP23.8■■□□□ 1.4
PDE6B-211ENST00000488061 PLEKHF1Q96S99 279 aa23.8■■□□□ 1.4
PDE6B-211ENST00000488061 RTCBQ9Y3I0 505 aaKnown RBP23.8■■□□□ 1.4
PDE6B-211ENST00000488061 RPS6KA4O75676 772 aa23.79■■□□□ 1.4
PDE6B-211ENST00000488061 RTF1Q92541 710 aaKnown RBP23.79■■□□□ 1.4
PDE6B-211ENST00000488061 MSH5O43196 834 aa23.78■■□□□ 1.4
PDE6B-211ENST00000488061 MYH14Q7Z406 1995 aaKnown RBP23.78■■□□□ 1.4
PDE6B-211ENST00000488061 ADCY9O60503 1353 aa23.78■■□□□ 1.4
PDE6B-211ENST00000488061 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
PDE6B-211ENST00000488061 MSL1Q68DK7 614 aa23.77■■□□□ 1.4
PDE6B-211ENST00000488061 TTC5Q8N0Z6 440 aa23.77■■□□□ 1.4
PDE6B-211ENST00000488061 TRAPPC3LQ5T215 181 aa23.76■■□□□ 1.39
PDE6B-211ENST00000488061 ZNF790Q6PG37 636 aa23.76■■□□□ 1.39
PDE6B-211ENST00000488061 AMIGO3Q86WK7 504 aa23.76■■□□□ 1.39
PDE6B-211ENST00000488061 DLG5Q8TDM6 1919 aa23.76■■□□□ 1.39
PDE6B-211ENST00000488061 CRKLP46109 303 aaKnown RBP23.74■■□□□ 1.39
PDE6B-211ENST00000488061 SLC39A6Q13433 755 aa23.74■■□□□ 1.39
PDE6B-211ENST00000488061 TEX13AQ9BXU3 409 aaPredicted RBP23.74■■□□□ 1.39
PDE6B-211ENST00000488061 GPBP1L1Q9HC44 474 aaPredicted RBP23.74■■□□□ 1.39
PDE6B-211ENST00000488061 MAPK8IP3Q9UPT6 1336 aa23.74■■□□□ 1.39
PDE6B-211ENST00000488061 PHF14O94880 888 aa23.73■■□□□ 1.39
PDE6B-211ENST00000488061 HSPA6P17066 643 aa23.73■■□□□ 1.39
PDE6B-211ENST00000488061 NFE2L2Q16236 605 aa23.72■■□□□ 1.39
PDE6B-211ENST00000488061 HEG1Q9ULI3 1381 aa23.72■■□□□ 1.39
PDE6B-211ENST00000488061 C4AP0C0L4 1744 aa23.72■■□□□ 1.39
PDE6B-211ENST00000488061 BTBD11A6QL63 1104 aa23.71■■□□□ 1.39
PDE6B-211ENST00000488061 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
PDE6B-211ENST00000488061 DNAJC10Q8IXB1 793 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms