RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 TOGARAM1Q9Y4F4 1720 aa18.32■□□□□ 0.52
NUP188-207ENST00000487952 IL16Q14005 1332 aa18.32■□□□□ 0.52
NUP188-207ENST00000487952 ZBED9Q6R2W3 1325 aa18.31■□□□□ 0.52
NUP188-207ENST00000487952 GNAI1P63096 354 aa18.31■□□□□ 0.52
NUP188-207ENST00000487952 SF3B2Q13435 895 aaKnown RBP18.31■□□□□ 0.52
NUP188-207ENST00000487952 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
NUP188-207ENST00000487952 TSPYL4Q9UJ04 414 aa18.31■□□□□ 0.52
NUP188-207ENST00000487952 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
NUP188-207ENST00000487952 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
NUP188-207ENST00000487952 IFT57Q9NWB7 429 aa18.3■□□□□ 0.52
NUP188-207ENST00000487952 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
NUP188-207ENST00000487952 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
NUP188-207ENST00000487952 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
NUP188-207ENST00000487952 CFAP44Q96MT7 982 aa18.29■□□□□ 0.52
NUP188-207ENST00000487952 SLC39A6Q13433 755 aa18.28■□□□□ 0.52
NUP188-207ENST00000487952 MYH16Q9H6N6 1097 aa18.28■□□□□ 0.52
NUP188-207ENST00000487952 MIS18AQ9NYP9 233 aa18.28■□□□□ 0.52
NUP188-207ENST00000487952 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
NUP188-207ENST00000487952 CHL1O00533 1208 aa18.27■□□□□ 0.52
NUP188-207ENST00000487952 APBA3O96018 575 aa18.27■□□□□ 0.52
NUP188-207ENST00000487952 PTF1AQ7RTS3 328 aa18.27■□□□□ 0.52
NUP188-207ENST00000487952 ASAP1Q9ULH1 1129 aa18.27■□□□□ 0.52
NUP188-207ENST00000487952 ITGB4P16144 1822 aa18.27■□□□□ 0.52
NUP188-207ENST00000487952 SBF2Q86WG5 1849 aa18.26■□□□□ 0.51
NUP188-207ENST00000487952 E9PSI1 815 aa18.26■□□□□ 0.51
NUP188-207ENST00000487952 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
NUP188-207ENST00000487952 ILDR2Q71H61 639 aa18.26■□□□□ 0.51
NUP188-207ENST00000487952 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
NUP188-207ENST00000487952 PALLDQ8WX93 1383 aa18.26■□□□□ 0.51
NUP188-207ENST00000487952 ZNF853P0CG23 659 aa18.25■□□□□ 0.51
NUP188-207ENST00000487952 MBIPQ9NS73 344 aa18.25■□□□□ 0.51
NUP188-207ENST00000487952 PTCD1O75127 700 aaKnown RBP18.24■□□□□ 0.51
NUP188-207ENST00000487952 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
NUP188-207ENST00000487952 FMNL2Q96PY5 1086 aa18.24■□□□□ 0.51
NUP188-207ENST00000487952 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
NUP188-207ENST00000487952 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
NUP188-207ENST00000487952 BTAF1O14981 1849 aa18.23■□□□□ 0.51
NUP188-207ENST00000487952 KCNQ3O43525 872 aa18.23■□□□□ 0.51
NUP188-207ENST00000487952 BAG6P46379 1132 aa18.23■□□□□ 0.51
NUP188-207ENST00000487952 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
NUP188-207ENST00000487952 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
NUP188-207ENST00000487952 SLFN5Q08AF3 891 aa18.22■□□□□ 0.51
NUP188-207ENST00000487952 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
NUP188-207ENST00000487952 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
NUP188-207ENST00000487952 EIF4A1P60842 406 aaKnown RBP18.21■□□□□ 0.51
NUP188-207ENST00000487952 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
NUP188-207ENST00000487952 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
NUP188-207ENST00000487952 PLSCR1O15162 318 aa18.2■□□□□ 0.5
NUP188-207ENST00000487952 SIK1P57059 783 aa18.2■□□□□ 0.5
NUP188-207ENST00000487952 PAPPAQ13219 1627 aa18.2■□□□□ 0.5
NUP188-207ENST00000487952 UPF1Q92900 1129 aaKnown RBP eCLIP18.19■□□□□ 0.5
NUP188-207ENST00000487952 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
NUP188-207ENST00000487952 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
NUP188-207ENST00000487952 HEG1Q9ULI3 1381 aa18.18■□□□□ 0.5
NUP188-207ENST00000487952 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
NUP188-207ENST00000487952 SNRPA1P09661 255 aaKnown RBP18.18■□□□□ 0.5
NUP188-207ENST00000487952 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
NUP188-207ENST00000487952 VSIG10Q8N0Z9 540 aa18.18■□□□□ 0.5
NUP188-207ENST00000487952 KCPQ6ZWJ8 1503 aa18.18■□□□□ 0.5
NUP188-207ENST00000487952 HMGB2P26583 209 aaKnown RBP18.17■□□□□ 0.5
NUP188-207ENST00000487952 SLC27A3Q5K4L6 730 aa18.17■□□□□ 0.5
NUP188-207ENST00000487952 EN1Q05925 392 aaPredicted RBP18.16■□□□□ 0.5
NUP188-207ENST00000487952 EXOSC9Q06265 439 aaKnown RBP18.16■□□□□ 0.5
NUP188-207ENST00000487952 TXNRD1Q16881 649 aa18.16■□□□□ 0.5
NUP188-207ENST00000487952 DUSP27Q5VZP5 1158 aa18.16■□□□□ 0.5
NUP188-207ENST00000487952 TEX13AQ9BXU3 409 aaPredicted RBP18.16■□□□□ 0.5
NUP188-207ENST00000487952 GIGYF1O75420 1035 aaPredicted RBP18.15■□□□□ 0.5
NUP188-207ENST00000487952 KRT24Q2M2I5 525 aa18.15■□□□□ 0.5
NUP188-207ENST00000487952 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
NUP188-207ENST00000487952 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
NUP188-207ENST00000487952 EP400Q96L91 3159 aa18.14■□□□□ 0.49
NUP188-207ENST00000487952 ELL2O00472 640 aaPredicted RBP18.14■□□□□ 0.49
NUP188-207ENST00000487952 HOXB7P09629 217 aa18.14■□□□□ 0.49
NUP188-207ENST00000487952 TWISTNBQ3B726 338 aaPredicted RBP18.14■□□□□ 0.49
NUP188-207ENST00000487952 DNAJC10Q8IXB1 793 aa18.14■□□□□ 0.49
NUP188-207ENST00000487952 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
NUP188-207ENST00000487952 CHMP4AQ9BY43 222 aa18.14■□□□□ 0.49
NUP188-207ENST00000487952 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
NUP188-207ENST00000487952 UBR2Q8IWV8 1755 aa18.14■□□□□ 0.49
NUP188-207ENST00000487952 STARD3NLO95772 234 aa18.13■□□□□ 0.49
NUP188-207ENST00000487952 KCNQ4P56696 695 aa18.13■□□□□ 0.49
NUP188-207ENST00000487952 EZH2Q15910 746 aaKnown RBP18.13■□□□□ 0.49
NUP188-207ENST00000487952 SLC4A9Q96Q91 983 aa18.13■□□□□ 0.49
NUP188-207ENST00000487952 CAMKK2Q96RR4 588 aa18.13■□□□□ 0.49
NUP188-207ENST00000487952 EIF2S2P20042 333 aaKnown RBP18.12■□□□□ 0.49
NUP188-207ENST00000487952 ITPK1Q13572 414 aa18.12■□□□□ 0.49
NUP188-207ENST00000487952 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
NUP188-207ENST00000487952 HDGFL1Q5TGJ6 251 aa18.11■□□□□ 0.49
NUP188-207ENST00000487952 TSPYL6Q8N831 410 aa18.11■□□□□ 0.49
NUP188-207ENST00000487952 LY75O60449 1722 aa18.11■□□□□ 0.49
NUP188-207ENST00000487952 RGPD3A6NKT7 1758 aaPredicted RBP18.1■□□□□ 0.49
NUP188-207ENST00000487952 RGPD4Q7Z3J3 1758 aa18.1■□□□□ 0.49
NUP188-207ENST00000487952 CT47B1P0C2W7 299 aaPredicted RBP18.1■□□□□ 0.49
NUP188-207ENST00000487952 LRRC4BQ9NT99 713 aa18.1■□□□□ 0.49
NUP188-207ENST00000487952 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
NUP188-207ENST00000487952 PROM2Q8N271 834 aa18.09■□□□□ 0.49
NUP188-207ENST00000487952 LINC00116Q8NCU8 138 aa18.09■□□□□ 0.49
NUP188-207ENST00000487952 NECTIN2Q92692 538 aa18.09■□□□□ 0.49
NUP188-207ENST00000487952 VAMP4O75379 141 aa18.08■□□□□ 0.48
NUP188-207ENST00000487952 CYP19A1P11511 503 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms