RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 TJP1Q07157 1748 aa22.83■■□□□ 1.25
HMG20B-212ENST00000487894 UBR2Q8IWV8 1755 aa22.82■■□□□ 1.24
HMG20B-212ENST00000487894 U2AF1L5P0DN76 240 aaPredicted RBP22.82■■□□□ 1.24
HMG20B-212ENST00000487894 PRKAR2BP31323 418 aa22.82■■□□□ 1.24
HMG20B-212ENST00000487894 U2AF1Q01081 240 aaKnown RBP eCLIP22.82■■□□□ 1.24
HMG20B-212ENST00000487894 ATG3Q9NT62 314 aa22.82■■□□□ 1.24
HMG20B-212ENST00000487894 CABP4P57796 275 aa22.81■■□□□ 1.24
HMG20B-212ENST00000487894 MAP3K5Q99683 1374 aa22.8■■□□□ 1.24
HMG20B-212ENST00000487894 MYBBP1AQ9BQG0 1328 aaKnown RBP22.8■■□□□ 1.24
HMG20B-212ENST00000487894 LOC102724428A0A0B4J2F2 783 aa22.79■■□□□ 1.24
HMG20B-212ENST00000487894 RNMTO43148 476 aaKnown RBP22.79■■□□□ 1.24
HMG20B-212ENST00000487894 SIK1P57059 783 aa22.79■■□□□ 1.24
HMG20B-212ENST00000487894 GAS2L2Q8NHY3 880 aa22.79■■□□□ 1.24
HMG20B-212ENST00000487894 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
HMG20B-212ENST00000487894 LGR6Q9HBX8 967 aa22.79■■□□□ 1.24
HMG20B-212ENST00000487894 PNPLA7Q6ZV29 1317 aa22.79■■□□□ 1.24
HMG20B-212ENST00000487894 FCHSD2O94868 740 aa22.77■■□□□ 1.24
HMG20B-212ENST00000487894 NFATC2IPQ8NCF5 419 aa22.77■■□□□ 1.24
HMG20B-212ENST00000487894 MYH14Q7Z406 1995 aaKnown RBP22.76■■□□□ 1.23
HMG20B-212ENST00000487894 ZNF316A6NFI3 1004 aaPredicted RBP22.76■■□□□ 1.23
HMG20B-212ENST00000487894 SLC52A2Q9HAB3 445 aa22.76■■□□□ 1.23
HMG20B-212ENST00000487894 SPON1Q9HCB6 807 aa22.76■■□□□ 1.23
HMG20B-212ENST00000487894 ZBTB7AO95365 584 aa22.75■■□□□ 1.23
HMG20B-212ENST00000487894 ITPK1Q13572 414 aa22.75■■□□□ 1.23
HMG20B-212ENST00000487894 TFCP2L1Q9NZI6 479 aa22.75■■□□□ 1.23
HMG20B-212ENST00000487894 KCPQ6ZWJ8 1503 aa22.75■■□□□ 1.23
HMG20B-212ENST00000487894 LINC00116Q8NCU8 138 aa22.74■■□□□ 1.23
HMG20B-212ENST00000487894 SLC4A9Q96Q91 983 aa22.74■■□□□ 1.23
HMG20B-212ENST00000487894 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
HMG20B-212ENST00000487894 GNAT3A8MTJ3 354 aa22.73■■□□□ 1.23
HMG20B-212ENST00000487894 ATP6V1AP38606 617 aa22.73■■□□□ 1.23
HMG20B-212ENST00000487894 C4AP0C0L4 1744 aa22.72■■□□□ 1.23
HMG20B-212ENST00000487894 HMGB2P26583 209 aaKnown RBP22.72■■□□□ 1.23
HMG20B-212ENST00000487894 RBM42Q9BTD8 480 aaKnown RBP22.72■■□□□ 1.23
HMG20B-212ENST00000487894 MTFR1LQ9H019 292 aa22.72■■□□□ 1.23
HMG20B-212ENST00000487894 CEMIPQ8WUJ3 1361 aa22.71■■□□□ 1.23
HMG20B-212ENST00000487894 PTGER2P43116 358 aa22.7■■□□□ 1.22
HMG20B-212ENST00000487894 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
HMG20B-212ENST00000487894 AK7Q96M32 723 aa22.7■■□□□ 1.22
HMG20B-212ENST00000487894 ATF5Q9Y2D1 282 aaPredicted RBP22.7■■□□□ 1.22
HMG20B-212ENST00000487894 AMIGO3Q86WK7 504 aa22.69■■□□□ 1.22
HMG20B-212ENST00000487894 PLEKHF1Q96S99 279 aa22.69■■□□□ 1.22
HMG20B-212ENST00000487894 PTCD1O75127 700 aaKnown RBP22.68■■□□□ 1.22
HMG20B-212ENST00000487894 COL23A1Q86Y22 540 aaPredicted RBP22.68■■□□□ 1.22
HMG20B-212ENST00000487894 SLC16A10Q8TF71 515 aa22.68■■□□□ 1.22
HMG20B-212ENST00000487894 SGIP1Q9BQI5 828 aa22.68■■□□□ 1.22
HMG20B-212ENST00000487894 SLC39A6Q13433 755 aa22.67■■□□□ 1.22
HMG20B-212ENST00000487894 KDM3BQ7LBC6 1761 aa22.66■■□□□ 1.22
HMG20B-212ENST00000487894 TEFQ10587 303 aa22.65■■□□□ 1.22
HMG20B-212ENST00000487894 CNTNAP4Q9C0A0 1308 aa22.64■■□□□ 1.22
HMG20B-212ENST00000487894 SMIM5Q71RC9 77 aa22.64■■□□□ 1.21
HMG20B-212ENST00000487894 FLAD1Q8NFF5 587 aa22.64■■□□□ 1.21
HMG20B-212ENST00000487894 PPP1R1BQ9UD71 204 aaPredicted RBP22.64■■□□□ 1.21
HMG20B-212ENST00000487894 GNPATO15228 680 aa22.63■■□□□ 1.21
HMG20B-212ENST00000487894 SSFA2P28290 1259 aa22.63■■□□□ 1.21
HMG20B-212ENST00000487894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.62■■□□□ 1.21
HMG20B-212ENST00000487894 MSH5O43196 834 aa22.62■■□□□ 1.21
HMG20B-212ENST00000487894 PHF14O94880 888 aa22.62■■□□□ 1.21
HMG20B-212ENST00000487894 NEFMP07197 916 aa22.62■■□□□ 1.21
HMG20B-212ENST00000487894 MCM10Q7L590 875 aa22.62■■□□□ 1.21
HMG20B-212ENST00000487894 MAPK8IP3Q9UPT6 1336 aa22.61■■□□□ 1.21
HMG20B-212ENST00000487894 RC3H1Q5TC82 1133 aaKnown RBP22.61■■□□□ 1.21
HMG20B-212ENST00000487894 RTF1Q92541 710 aaKnown RBP22.61■■□□□ 1.21
HMG20B-212ENST00000487894 PNNQ9H307 717 aaKnown RBP22.61■■□□□ 1.21
HMG20B-212ENST00000487894 HTATSF1O43719 755 aaKnown RBP22.6■■□□□ 1.21
HMG20B-212ENST00000487894 DCTN1Q14203 1278 aa22.6■■□□□ 1.21
HMG20B-212ENST00000487894 NFE2L2Q16236 605 aa22.6■■□□□ 1.21
HMG20B-212ENST00000487894 LAMB4A4D0S4 1761 aa22.59■■□□□ 1.21
HMG20B-212ENST00000487894 DNAJC10Q8IXB1 793 aa22.59■■□□□ 1.21
HMG20B-212ENST00000487894 CRKLP46109 303 aaKnown RBP22.58■■□□□ 1.21
HMG20B-212ENST00000487894 ZNF790Q6PG37 636 aa22.58■■□□□ 1.21
HMG20B-212ENST00000487894 TTC5Q8N0Z6 440 aa22.58■■□□□ 1.21
HMG20B-212ENST00000487894 WDR43Q15061 677 aaKnown RBP eCLIP22.57■■□□□ 1.2
HMG20B-212ENST00000487894 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
HMG20B-212ENST00000487894 VSIG10Q8N0Z9 540 aa22.57■■□□□ 1.2
HMG20B-212ENST00000487894 RTCBQ9Y3I0 505 aaKnown RBP22.57■■□□□ 1.2
HMG20B-212ENST00000487894 HEG1Q9ULI3 1381 aa22.56■■□□□ 1.2
HMG20B-212ENST00000487894 ZNF496Q96IT1 587 aaPredicted RBP22.56■■□□□ 1.2
HMG20B-212ENST00000487894 ARXQ96QS3 562 aa22.56■■□□□ 1.2
HMG20B-212ENST00000487894 BTBD11A6QL63 1104 aa22.55■■□□□ 1.2
HMG20B-212ENST00000487894 RPS6KA4O75676 772 aa22.55■■□□□ 1.2
HMG20B-212ENST00000487894 POLD1P28340 1107 aa22.55■■□□□ 1.2
HMG20B-212ENST00000487894 KCNQ3O43525 872 aa22.54■■□□□ 1.2
HMG20B-212ENST00000487894 CYP19A1P11511 503 aaPredicted RBP22.54■■□□□ 1.2
HMG20B-212ENST00000487894 CCDC146Q8IYE0 955 aa22.54■■□□□ 1.2
HMG20B-212ENST00000487894 INTS5Q6P9B9 1019 aaKnown RBP22.53■■□□□ 1.2
HMG20B-212ENST00000487894 FHDC1Q9C0D6 1143 aaPredicted RBP22.53■■□□□ 1.2
HMG20B-212ENST00000487894 CCDC87Q9NVE4 849 aa22.53■■□□□ 1.2
HMG20B-212ENST00000487894 ADAMTS8Q9UP79 889 aa22.53■■□□□ 1.2
HMG20B-212ENST00000487894 TRAPPC3LQ5T215 181 aa22.52■■□□□ 1.2
HMG20B-212ENST00000487894 FMNL2Q96PY5 1086 aa22.52■■□□□ 1.2
HMG20B-212ENST00000487894 TMPOP42166 694 aaKnown RBP22.51■■□□□ 1.19
HMG20B-212ENST00000487894 CCDC184Q52MB2 194 aa22.51■■□□□ 1.19
HMG20B-212ENST00000487894 ARHGEF1Q92888 912 aaKnown RBP22.51■■□□□ 1.19
HMG20B-212ENST00000487894 THUMPD2Q9BTF0 503 aaKnown RBP22.51■■□□□ 1.19
HMG20B-212ENST00000487894 SCN7AQ01118 1682 aa22.51■■□□□ 1.19
HMG20B-212ENST00000487894 KIF13BQ9NQT8 1826 aa22.5■■□□□ 1.19
HMG20B-212ENST00000487894 RUNDC1Q96C34 613 aa22.5■■□□□ 1.19
HMG20B-212ENST00000487894 ZBTB1Q9Y2K1 713 aa22.5■■□□□ 1.19
HMG20B-212ENST00000487894 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms