RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
SATB1-215ENST00000487699 SCN11AQ9UI33 1791 aa12.98□□□□□ -0.33
SATB1-215ENST00000487699 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
SATB1-215ENST00000487699 LOC102724428A0A0B4J2F2 783 aa12.97□□□□□ -0.33
SATB1-215ENST00000487699 SIK1P57059 783 aa12.97□□□□□ -0.33
SATB1-215ENST00000487699 CABP4P57796 275 aa12.97□□□□□ -0.33
SATB1-215ENST00000487699 GAS2L2Q8NHY3 880 aa12.97□□□□□ -0.33
SATB1-215ENST00000487699 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
SATB1-215ENST00000487699 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
SATB1-215ENST00000487699 LINC00116Q8NCU8 138 aa12.96□□□□□ -0.33
SATB1-215ENST00000487699 STK32BQ9NY57 414 aa12.96□□□□□ -0.33
SATB1-215ENST00000487699 PNPLA7Q6ZV29 1317 aa12.95□□□□□ -0.34
SATB1-215ENST00000487699 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
SATB1-215ENST00000487699 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
SATB1-215ENST00000487699 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
SATB1-215ENST00000487699 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
SATB1-215ENST00000487699 TAF1LQ8IZX4 1826 aa12.93□□□□□ -0.34
SATB1-215ENST00000487699 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
SATB1-215ENST00000487699 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
SATB1-215ENST00000487699 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
SATB1-215ENST00000487699 KCNQ3O43525 872 aa12.92□□□□□ -0.34
SATB1-215ENST00000487699 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
SATB1-215ENST00000487699 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
SATB1-215ENST00000487699 PTGER2P43116 358 aa12.92□□□□□ -0.34
SATB1-215ENST00000487699 NFE2L2Q16236 605 aa12.92□□□□□ -0.34
SATB1-215ENST00000487699 MCM10Q7L590 875 aa12.92□□□□□ -0.34
SATB1-215ENST00000487699 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
SATB1-215ENST00000487699 TUBGCP6Q96RT7 1819 aa12.92□□□□□ -0.34
SATB1-215ENST00000487699 C5P01031 1676 aa12.92□□□□□ -0.34
SATB1-215ENST00000487699 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
SATB1-215ENST00000487699 LRP5O75197 1615 aa12.91□□□□□ -0.34
SATB1-215ENST00000487699 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
SATB1-215ENST00000487699 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
SATB1-215ENST00000487699 PTCD1O75127 700 aaKnown RBP12.91□□□□□ -0.34
SATB1-215ENST00000487699 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
SATB1-215ENST00000487699 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
SATB1-215ENST00000487699 ZBTB7AO95365 584 aa12.9□□□□□ -0.34
SATB1-215ENST00000487699 TFCP2L1Q9NZI6 479 aa12.9□□□□□ -0.34
SATB1-215ENST00000487699 CICQ96RK0 1608 aaPredicted RBP12.9□□□□□ -0.34
SATB1-215ENST00000487699 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
SATB1-215ENST00000487699 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
SATB1-215ENST00000487699 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
SATB1-215ENST00000487699 CCDC146Q8IYE0 955 aa12.89□□□□□ -0.35
SATB1-215ENST00000487699 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
SATB1-215ENST00000487699 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
SATB1-215ENST00000487699 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
SATB1-215ENST00000487699 TJP1Q07157 1748 aa12.88□□□□□ -0.35
SATB1-215ENST00000487699 INTS5Q6P9B9 1019 aaKnown RBP12.88□□□□□ -0.35
SATB1-215ENST00000487699 DNAJC10Q8IXB1 793 aa12.88□□□□□ -0.35
SATB1-215ENST00000487699 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
SATB1-215ENST00000487699 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
SATB1-215ENST00000487699 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
SATB1-215ENST00000487699 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
SATB1-215ENST00000487699 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
SATB1-215ENST00000487699 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
SATB1-215ENST00000487699 TEFQ10587 303 aa12.87□□□□□ -0.35
SATB1-215ENST00000487699 RUNDC1Q96C34 613 aa12.87□□□□□ -0.35
SATB1-215ENST00000487699 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
SATB1-215ENST00000487699 PNNQ9H307 717 aaKnown RBP12.87□□□□□ -0.35
SATB1-215ENST00000487699 SPON1Q9HCB6 807 aa12.87□□□□□ -0.35
SATB1-215ENST00000487699 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
SATB1-215ENST00000487699 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
SATB1-215ENST00000487699 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
SATB1-215ENST00000487699 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
SATB1-215ENST00000487699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.86□□□□□ -0.35
SATB1-215ENST00000487699 ANP32CO43423 234 aa12.86□□□□□ -0.35
SATB1-215ENST00000487699 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
SATB1-215ENST00000487699 SLC16A10Q8TF71 515 aa12.86□□□□□ -0.35
SATB1-215ENST00000487699 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
SATB1-215ENST00000487699 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
SATB1-215ENST00000487699 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
SATB1-215ENST00000487699 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
SATB1-215ENST00000487699 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
SATB1-215ENST00000487699 SSFA2P28290 1259 aa12.85□□□□□ -0.35
SATB1-215ENST00000487699 CRKLP46109 303 aaKnown RBP12.85□□□□□ -0.35
SATB1-215ENST00000487699 RIPK4P57078 832 aa12.85□□□□□ -0.35
SATB1-215ENST00000487699 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
SATB1-215ENST00000487699 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
SATB1-215ENST00000487699 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
SATB1-215ENST00000487699 AK7Q96M32 723 aa12.85□□□□□ -0.35
SATB1-215ENST00000487699 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
SATB1-215ENST00000487699 GNPATO15228 680 aa12.84□□□□□ -0.35
SATB1-215ENST00000487699 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
SATB1-215ENST00000487699 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
SATB1-215ENST00000487699 PHF14O94880 888 aa12.83□□□□□ -0.36
SATB1-215ENST00000487699 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
SATB1-215ENST00000487699 FLAD1Q8NFF5 587 aa12.83□□□□□ -0.36
SATB1-215ENST00000487699 APAF1O14727 1248 aa12.82□□□□□ -0.36
SATB1-215ENST00000487699 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
SATB1-215ENST00000487699 USP16Q9Y5T5 823 aa12.82□□□□□ -0.36
SATB1-215ENST00000487699 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
SATB1-215ENST00000487699 NEFMP07197 916 aa12.81□□□□□ -0.36
SATB1-215ENST00000487699 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
SATB1-215ENST00000487699 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
SATB1-215ENST00000487699 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
SATB1-215ENST00000487699 FMNL2Q96PY5 1086 aa12.81□□□□□ -0.36
SATB1-215ENST00000487699 MRS2Q9HD23 443 aa12.81□□□□□ -0.36
SATB1-215ENST00000487699 CCDC87Q9NVE4 849 aa12.81□□□□□ -0.36
SATB1-215ENST00000487699 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
SATB1-215ENST00000487699 EIF5P55010 431 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms