RNA–Protein interactions for RNA: ENST00000487271.5

TRAF3IP3-215, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 4

Gene TRAF3IP3, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-215ENST00000487271 IL16Q14005 1332 aa13.15□□□□□ -0.3
TRAF3IP3-215ENST00000487271 PIGBQ92521 554 aa13.15□□□□□ -0.3
TRAF3IP3-215ENST00000487271 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
TRAF3IP3-215ENST00000487271 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
TRAF3IP3-215ENST00000487271 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
TRAF3IP3-215ENST00000487271 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
TRAF3IP3-215ENST00000487271 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
TRAF3IP3-215ENST00000487271 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
TRAF3IP3-215ENST00000487271 APBA3O96018 575 aa13.13□□□□□ -0.31
TRAF3IP3-215ENST00000487271 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
TRAF3IP3-215ENST00000487271 TSR2Q969E8 191 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP3-215ENST00000487271 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
TRAF3IP3-215ENST00000487271 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
TRAF3IP3-215ENST00000487271 CHL1O00533 1208 aa13.12□□□□□ -0.31
TRAF3IP3-215ENST00000487271 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP3-215ENST00000487271 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
TRAF3IP3-215ENST00000487271 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
TRAF3IP3-215ENST00000487271 BCL9O00512 1426 aa13.12□□□□□ -0.31
TRAF3IP3-215ENST00000487271 ZNF521Q96K83 1311 aa13.12□□□□□ -0.31
TRAF3IP3-215ENST00000487271 DLG5Q8TDM6 1919 aa13.11□□□□□ -0.31
TRAF3IP3-215ENST00000487271 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
TRAF3IP3-215ENST00000487271 FMNL2Q96PY5 1086 aa13.11□□□□□ -0.31
TRAF3IP3-215ENST00000487271 ATG3Q9NT62 314 aa13.11□□□□□ -0.31
TRAF3IP3-215ENST00000487271 KCNQ3O43525 872 aa13.1□□□□□ -0.31
TRAF3IP3-215ENST00000487271 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
TRAF3IP3-215ENST00000487271 PTF1AQ7RTS3 328 aa13.1□□□□□ -0.31
TRAF3IP3-215ENST00000487271 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
TRAF3IP3-215ENST00000487271 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
TRAF3IP3-215ENST00000487271 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
TRAF3IP3-215ENST00000487271 DOT1LQ8TEK3 1739 aa13.09□□□□□ -0.31
TRAF3IP3-215ENST00000487271 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
TRAF3IP3-215ENST00000487271 PALLDQ8WX93 1383 aa13.08□□□□□ -0.31
TRAF3IP3-215ENST00000487271 ATP6V1AP38606 617 aa13.08□□□□□ -0.32
TRAF3IP3-215ENST00000487271 BAG6P46379 1132 aa13.08□□□□□ -0.32
TRAF3IP3-215ENST00000487271 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP3-215ENST00000487271 EXOSC9Q06265 439 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP3-215ENST00000487271 CCDC125Q86Z20 511 aa13.08□□□□□ -0.32
TRAF3IP3-215ENST00000487271 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.32
TRAF3IP3-215ENST00000487271 MRC1P22897 1456 aa13.08□□□□□ -0.32
TRAF3IP3-215ENST00000487271 SNRPA1P09661 255 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP3-215ENST00000487271 TEX13AQ9BXU3 409 aaPredicted RBP13.07□□□□□ -0.32
TRAF3IP3-215ENST00000487271 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
TRAF3IP3-215ENST00000487271 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
TRAF3IP3-215ENST00000487271 TOGARAM1Q9Y4F4 1720 aa13.06□□□□□ -0.32
TRAF3IP3-215ENST00000487271 LOC102724428A0A0B4J2F2 783 aa13.06□□□□□ -0.32
TRAF3IP3-215ENST00000487271 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP3-215ENST00000487271 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP3-215ENST00000487271 SIK1P57059 783 aa13.06□□□□□ -0.32
TRAF3IP3-215ENST00000487271 TWISTNBQ3B726 338 aaPredicted RBP13.06□□□□□ -0.32
TRAF3IP3-215ENST00000487271 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
TRAF3IP3-215ENST00000487271 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
TRAF3IP3-215ENST00000487271 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 STARD3NLO95772 234 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 KRT24Q2M2I5 525 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 ILDR2Q71H61 639 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 NHSQ6T4R5 1651 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 HEG1Q9ULI3 1381 aa13.05□□□□□ -0.32
TRAF3IP3-215ENST00000487271 PLSCR1O15162 318 aa13.04□□□□□ -0.32
TRAF3IP3-215ENST00000487271 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP3-215ENST00000487271 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP3-215ENST00000487271 ITGB4P16144 1822 aa13.04□□□□□ -0.32
TRAF3IP3-215ENST00000487271 GIGYF1O75420 1035 aaPredicted RBP13.03□□□□□ -0.32
TRAF3IP3-215ENST00000487271 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
TRAF3IP3-215ENST00000487271 KCNQ4P56696 695 aa13.03□□□□□ -0.32
TRAF3IP3-215ENST00000487271 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
TRAF3IP3-215ENST00000487271 SLC27A3Q5K4L6 730 aa13.03□□□□□ -0.32
TRAF3IP3-215ENST00000487271 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
TRAF3IP3-215ENST00000487271 DNAJC10Q8IXB1 793 aa13.03□□□□□ -0.32
TRAF3IP3-215ENST00000487271 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
TRAF3IP3-215ENST00000487271 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.32
TRAF3IP3-215ENST00000487271 PRAMEF22A3QJZ6 481 aa13.02□□□□□ -0.33
TRAF3IP3-215ENST00000487271 HOXB7P09629 217 aa13.02□□□□□ -0.33
TRAF3IP3-215ENST00000487271 CCDC30Q5VVM6 783 aa13.02□□□□□ -0.33
TRAF3IP3-215ENST00000487271 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
TRAF3IP3-215ENST00000487271 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.33
TRAF3IP3-215ENST00000487271 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP3-215ENST00000487271 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
TRAF3IP3-215ENST00000487271 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
TRAF3IP3-215ENST00000487271 UPF1Q92900 1129 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAF3IP3-215ENST00000487271 ARXQ96QS3 562 aa13.01□□□□□ -0.33
TRAF3IP3-215ENST00000487271 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
TRAF3IP3-215ENST00000487271 USP16Q9Y5T5 823 aa13.01□□□□□ -0.33
TRAF3IP3-215ENST00000487271 BTAF1O14981 1849 aa13□□□□□ -0.33
TRAF3IP3-215ENST00000487271 SBF2Q86WG5 1849 aa13□□□□□ -0.33
TRAF3IP3-215ENST00000487271 SIPA1L3O60292 1781 aaPredicted RBP13□□□□□ -0.33
TRAF3IP3-215ENST00000487271 TCERG1O14776 1098 aaKnown RBP13□□□□□ -0.33
TRAF3IP3-215ENST00000487271 VAMP4O75379 141 aa13□□□□□ -0.33
TRAF3IP3-215ENST00000487271 AK7Q96M32 723 aa13□□□□□ -0.33
TRAF3IP3-215ENST00000487271 KCPQ6ZWJ8 1503 aa12.99□□□□□ -0.33
TRAF3IP3-215ENST00000487271 MYL6BP14649 208 aa12.99□□□□□ -0.33
TRAF3IP3-215ENST00000487271 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
TRAF3IP3-215ENST00000487271 ITPK1Q13572 414 aa12.99□□□□□ -0.33
TRAF3IP3-215ENST00000487271 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
TRAF3IP3-215ENST00000487271 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
TRAF3IP3-215ENST00000487271 DBF4Q9UBU7 674 aaPredicted RBP12.99□□□□□ -0.33
TRAF3IP3-215ENST00000487271 A1BGP04217 495 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms