RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 ATP8B2P98198 1209 aa15.19■□□□□ 0.02
PTCD2-204ENST00000486995 USHBP1Q8N6Y0 703 aa15.19■□□□□ 0.02
PTCD2-204ENST00000486995 PHF8Q9UPP1 1060 aa15.19■□□□□ 0.02
PTCD2-204ENST00000486995 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
PTCD2-204ENST00000486995 PNMA6EA0A0J9YXQ4 647 aa15.19■□□□□ 0.02
PTCD2-204ENST00000486995 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
PTCD2-204ENST00000486995 FAM208AQ9UK61 1670 aaKnown RBP15.18■□□□□ 0.02
PTCD2-204ENST00000486995 REC8O95072 547 aa15.17■□□□□ 0.02
PTCD2-204ENST00000486995 SSFA2P28290 1259 aa15.17■□□□□ 0.02
PTCD2-204ENST00000486995 IP6K1Q92551 441 aa15.17■□□□□ 0.02
PTCD2-204ENST00000486995 ARXQ96QS3 562 aa15.17■□□□□ 0.02
PTCD2-204ENST00000486995 ERC2O15083 957 aa15.17■□□□□ 0.02
PTCD2-204ENST00000486995 CLEC17AQ6ZS10 378 aa15.17■□□□□ 0.02
PTCD2-204ENST00000486995 LRRCC1Q9C099 1032 aa15.17■□□□□ 0.02
PTCD2-204ENST00000486995 USP44Q9H0E7 712 aa15.16■□□□□ 0.02
PTCD2-204ENST00000486995 CEMIPQ8WUJ3 1361 aa15.16■□□□□ 0.02
PTCD2-204ENST00000486995 NBPF6Q5VWK0 638 aa15.16■□□□□ 0.02
PTCD2-204ENST00000486995 TSHZ3Q63HK5 1081 aa15.16■□□□□ 0.02
PTCD2-204ENST00000486995 FAM43AQ8N2R8 423 aa15.16■□□□□ 0.02
PTCD2-204ENST00000486995 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
PTCD2-204ENST00000486995 NBPF4Q96M43 638 aa15.16■□□□□ 0.02
PTCD2-204ENST00000486995 LRRFIP2Q9Y608 721 aaKnown RBP15.16■□□□□ 0.02
PTCD2-204ENST00000486995 IBTKQ9P2D0 1353 aaPredicted RBP15.16■□□□□ 0.02
PTCD2-204ENST00000486995 HDGFL1Q5TGJ6 251 aa15.15■□□□□ 0.02
PTCD2-204ENST00000486995 PHAXQ9H814 394 aaKnown RBP15.15■□□□□ 0.02
PTCD2-204ENST00000486995 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
PTCD2-204ENST00000486995 MX1P20591 662 aa15.14■□□□□ 0.01
PTCD2-204ENST00000486995 PANK2Q9BZ23 570 aa15.14■□□□□ 0.01
PTCD2-204ENST00000486995 LGR6Q9HBX8 967 aa15.14■□□□□ 0.01
PTCD2-204ENST00000486995 PXDNLA1KZ92 1463 aa15.14■□□□□ 0.01
PTCD2-204ENST00000486995 PTMSP20962 102 aa15.13■□□□□ 0.01
PTCD2-204ENST00000486995 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
PTCD2-204ENST00000486995 NFAT5O94916 1531 aa15.13■□□□□ 0.01
PTCD2-204ENST00000486995 ST18O60284 1047 aa15.13■□□□□ 0.01
PTCD2-204ENST00000486995 MRE11P49959 708 aa15.13■□□□□ 0.01
PTCD2-204ENST00000486995 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
PTCD2-204ENST00000486995 EIF4A1P60842 406 aaKnown RBP15.13■□□□□ 0.01
PTCD2-204ENST00000486995 STAP2Q9UGK3 403 aa15.13■□□□□ 0.01
PTCD2-204ENST00000486995 BAG4O95429 457 aaKnown RBP15.12■□□□□ 0.01
PTCD2-204ENST00000486995 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
PTCD2-204ENST00000486995 LTN1O94822 1766 aa15.12■□□□□ 0.01
PTCD2-204ENST00000486995 CHD2O14647 1828 aaKnown RBP15.12■□□□□ 0.01
PTCD2-204ENST00000486995 CYP2E1P05181 493 aaPredicted RBP15.12■□□□□ 0.01
PTCD2-204ENST00000486995 PSME1Q06323 249 aa15.12■□□□□ 0.01
PTCD2-204ENST00000486995 ESCO1Q5FWF5 840 aa15.12■□□□□ 0.01
PTCD2-204ENST00000486995 SSH3Q8TE77 659 aa15.12■□□□□ 0.01
PTCD2-204ENST00000486995 ESYT1Q9BSJ8 1104 aa15.12■□□□□ 0.01
PTCD2-204ENST00000486995 ISY1Q9ULR0 285 aaKnown RBP15.12■□□□□ 0.01
PTCD2-204ENST00000486995 GRPEL1Q9HAV7 217 aa15.11■□□□□ 0.01
PTCD2-204ENST00000486995 EIF2S2P20042 333 aaKnown RBP15.11■□□□□ 0.01
PTCD2-204ENST00000486995 NUCB2P80303 420 aa15.11■□□□□ 0.01
PTCD2-204ENST00000486995 KCNH5Q8NCM2 988 aa15.11■□□□□ 0.01
PTCD2-204ENST00000486995 GAS2L3Q86XJ1 694 aa15.1■□□□□ 0.01
PTCD2-204ENST00000486995 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
PTCD2-204ENST00000486995 N4BP2Q86UW6 1770 aaPredicted RBP15.1■□□□□ 0.01
PTCD2-204ENST00000486995 MED1Q15648 1581 aaPredicted RBP15.1■□□□□ 0.01
PTCD2-204ENST00000486995 KCNQ3O43525 872 aa15.1■□□□□ 0.01
PTCD2-204ENST00000486995 CHMLP26374 656 aa15.1■□□□□ 0.01
PTCD2-204ENST00000486995 PKP1Q13835 747 aa15.1■□□□□ 0.01
PTCD2-204ENST00000486995 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
PTCD2-204ENST00000486995 SRCIN1Q9C0H9 1055 aa15.1■□□□□ 0.01
PTCD2-204ENST00000486995 HOXB7P09629 217 aa15.09■□□□□ 0.01
PTCD2-204ENST00000486995 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
PTCD2-204ENST00000486995 LRRC59Q96AG4 307 aaKnown RBP15.09■□□□□ 0.01
PTCD2-204ENST00000486995 TUBGCP6Q96RT7 1819 aa15.09■□□□□ 0.01
PTCD2-204ENST00000486995 GOLGA6L22H0YM25 854 aa15.09■□□□□ 0.01
PTCD2-204ENST00000486995 POLA2Q14181 598 aa15.09■□□□□ 0.01
PTCD2-204ENST00000486995 PPP1R42Q7Z4L9 355 aa15.09■□□□□ 0.01
PTCD2-204ENST00000486995 UNC5CLQ8IV45 518 aa15.09■□□□□ 0.01
PTCD2-204ENST00000486995 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
PTCD2-204ENST00000486995 CHPF2Q9P2E5 772 aa15.09■□□□□ 0.01
PTCD2-204ENST00000486995 ZBTB7CA1YPR0 619 aa15.08■□□□□ 0
PTCD2-204ENST00000486995 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
PTCD2-204ENST00000486995 ADGRL3Q9HAR2 1447 aa15.08■□□□□ 0
PTCD2-204ENST00000486995 AKAP4Q5JQC9 854 aa15.08■□□□□ 0
PTCD2-204ENST00000486995 BEND3Q5T5X7 828 aa15.08■□□□□ 0
PTCD2-204ENST00000486995 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0
PTCD2-204ENST00000486995 AOX1Q06278 1338 aa15.07■□□□□ 0
PTCD2-204ENST00000486995 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
PTCD2-204ENST00000486995 RRAGDQ9NQL2 400 aaPredicted RBP15.07■□□□□ 0
PTCD2-204ENST00000486995 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
PTCD2-204ENST00000486995 RAB11FIP3O75154 756 aa15.07■□□□□ 0
PTCD2-204ENST00000486995 NEK4P51957 841 aa15.07■□□□□ 0
PTCD2-204ENST00000486995 KLHL40Q2TBA0 621 aa15.07■□□□□ 0
PTCD2-204ENST00000486995 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
PTCD2-204ENST00000486995 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
PTCD2-204ENST00000486995 BTBD11A6QL63 1104 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 SURF6O75683 361 aaKnown RBP15.06■□□□□ 0
PTCD2-204ENST00000486995 PLEKHO1Q53GL0 409 aaPredicted RBP15.06■□□□□ 0
PTCD2-204ENST00000486995 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 DNAAF4Q8WXU2 420 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 PALD1Q9ULE6 856 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 AK9Q5TCS8 1911 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 SETD1BQ9UPS6 1966 aaKnown RBP15.06■□□□□ 0
PTCD2-204ENST00000486995 GCP02774 474 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 TEFQ10587 303 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 NUTM1Q86Y26 1132 aa15.06■□□□□ 0
PTCD2-204ENST00000486995 MCTP1Q6DN14 999 aa15.05■□□□□ 0
PTCD2-204ENST00000486995 ARHGEF25Q86VW2 580 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms