RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	ZKSCAN2	Q63HK3	967 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	LARP1	Q6PKG0	1096 aa	Known RBP	11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	MPRIP	Q6WCQ1	1025 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	IFNL2	Q8IZJ0	200 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	PELP1	Q8IZL8	1130 aa	Known RBP	11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	C8orf58	Q8NAV2	365 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	EXOC6	Q8TAG9	804 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	SSH1	Q8WYL5	1049 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	CRBN	Q96SW2	442 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	BCL2L13	Q9BXK5	485 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	PARP4	Q9UKK3	1724 aa	Known RBP	11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	OVOS2	A0A0G2JMS6	1433 aa		11.6	□□□□□ -0.55
KIFC1-213	ENST00000486695	BCL9L	Q86UU0	1499 aa		11.59	□□□□□ -0.55
KIFC1-213	ENST00000486695	CEMIP	Q8WUJ3	1361 aa		11.59	□□□□□ -0.55
KIFC1-213	ENST00000486695	LGR6	Q9HBX8	967 aa		11.59	□□□□□ -0.55
KIFC1-213	ENST00000486695	MIS18A	Q9NYP9	233 aa		11.59	□□□□□ -0.55
KIFC1-213	ENST00000486695	MEGF6	O75095	1541 aa		11.59	□□□□□ -0.55
KIFC1-213	ENST00000486695	KIF16B	Q96L93	1317 aa		11.59	□□□□□ -0.55
KIFC1-213	ENST00000486695	PHKG2	P15735	406 aa		11.58	□□□□□ -0.56
KIFC1-213	ENST00000486695	C20orf194	Q5TEA3	1177 aa		11.58	□□□□□ -0.56
KIFC1-213	ENST00000486695	TSPYL6	Q8N831	410 aa		11.58	□□□□□ -0.56
KIFC1-213	ENST00000486695	ZCRB1	Q8TBF4	217 aa	Known RBP	11.58	□□□□□ -0.56
KIFC1-213	ENST00000486695	CCDC136	Q96JN2	1154 aa		11.58	□□□□□ -0.56
KIFC1-213	ENST00000486695	CHMP4A	Q9BY43	222 aa		11.58	□□□□□ -0.56
KIFC1-213	ENST00000486695	VIRMA	Q69YN4	1812 aa	Known RBP	11.58	□□□□□ -0.56
KIFC1-213	ENST00000486695	SOS1	Q07889	1333 aa	Predicted RBP	11.58	□□□□□ -0.56
KIFC1-213	ENST00000486695	PKD1L3	Q7Z443	1732 aa		11.57	□□□□□ -0.56
KIFC1-213	ENST00000486695	BRPF1	P55201	1214 aa	Predicted RBP	11.57	□□□□□ -0.56
KIFC1-213	ENST00000486695	GJD4	Q96KN9	370 aa	Predicted RBP	11.57	□□□□□ -0.56
KIFC1-213	ENST00000486695	BTBD11	A6QL63	1104 aa		11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	B4GALNT3	Q6L9W6	998 aa		11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	CCDC125	Q86Z20	511 aa		11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	FTSJ3	Q8IY81	847 aa	Known RBP	11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	MRPL50	Q8N5N7	158 aa	Known RBP	11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	DCAF5	Q96JK2	942 aa		11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	NOB1	Q9ULX3	412 aa	Known RBP	11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	PCDH11X	Q9BZA7	1347 aa		11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	PCDH11Y	Q9BZA8	1340 aa		11.56	□□□□□ -0.56
KIFC1-213	ENST00000486695	PLCH1	Q4KWH8	1693 aa		11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	SCN11A	Q9UI33	1791 aa		11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	AAMP	Q13685	434 aa		11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	ATF7IP	Q6VMQ6	1270 aa		11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	UNC5CL	Q8IV45	518 aa		11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	DZIP1L	Q8IYY4	767 aa	Known RBP	11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	ARHGAP45	Q92619	1136 aa		11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	USP35	Q9P2H5	1018 aa		11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	ADAMTS7	Q9UKP4	1686 aa		11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.55	□□□□□ -0.56
KIFC1-213	ENST00000486695	CYP27B1	O15528	508 aa		11.54	□□□□□ -0.56
KIFC1-213	ENST00000486695	KRT24	Q2M2I5	525 aa		11.54	□□□□□ -0.56
KIFC1-213	ENST00000486695	PANK1	Q8TE04	598 aa		11.54	□□□□□ -0.56
KIFC1-213	ENST00000486695	STK31	Q9BXU1	1019 aa		11.54	□□□□□ -0.56
KIFC1-213	ENST00000486695	API5	Q9BZZ5	524 aa	Known RBP	11.54	□□□□□ -0.56
KIFC1-213	ENST00000486695	SLIT2	O94813	1529 aa		11.54	□□□□□ -0.56
KIFC1-213	ENST00000486695	KDM3B	Q7LBC6	1761 aa		11.54	□□□□□ -0.56
KIFC1-213	ENST00000486695	NWD2	Q9ULI1	1742 aa		11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	TCERG1	O14776	1098 aa	Known RBP	11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	CABP4	P57796	275 aa		11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	CCDC30	Q5VVM6	783 aa		11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	DDX54	Q8TDD1	881 aa	Known RBP	11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	CLUAP1	Q96AJ1	413 aa		11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	SLC52A2	Q9HAB3	445 aa		11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	COG6	Q9Y2V7	657 aa		11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	EP400	Q96L91	3159 aa		11.53	□□□□□ -0.56
KIFC1-213	ENST00000486695	SIPA1L3	O60292	1781 aa	Predicted RBP	11.52	□□□□□ -0.57
KIFC1-213	ENST00000486695	TRIM27	P14373	513 aa		11.52	□□□□□ -0.57
KIFC1-213	ENST00000486695	EIF4A1	P60842	406 aa	Known RBP	11.52	□□□□□ -0.57
KIFC1-213	ENST00000486695	CHMP4B	Q9H444	224 aa	Known RBP	11.52	□□□□□ -0.57
KIFC1-213	ENST00000486695	THRAP3	Q9Y2W1	955 aa	Known RBP	11.52	□□□□□ -0.57
KIFC1-213	ENST00000486695	GLI3	P10071	1580 aa		11.52	□□□□□ -0.57
KIFC1-213	ENST00000486695	KDM6A	O15550	1401 aa	Predicted RBP	11.52	□□□□□ -0.57
KIFC1-213	ENST00000486695	SRCAP	Q6ZRS2	3230 aa		11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	ERVV-2	B6SEH9	535 aa		11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	EXOC5	O00471	708 aa		11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	HOXB7	P09629	217 aa		11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	MVP	Q14764	893 aa	Known RBP	11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	NKX1-1	Q15270	411 aa	Predicted RBP	11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	NFATC2IP	Q8NCF5	419 aa		11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	DDX19B	Q9UMR2	479 aa		11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	CCDC9	Q9Y3X0	531 aa	Known RBP	11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	NRAP	Q86VF7	1730 aa		11.51	□□□□□ -0.57
KIFC1-213	ENST00000486695	HDGFL1	Q5TGJ6	251 aa		11.5	□□□□□ -0.57
KIFC1-213	ENST00000486695	TTC5	Q8N0Z6	440 aa		11.5	□□□□□ -0.57
KIFC1-213	ENST00000486695	TNN	Q9UQP3	1299 aa		11.5	□□□□□ -0.57
KIFC1-213	ENST00000486695	BRWD3	Q6RI45	1802 aa		11.5	□□□□□ -0.57
KIFC1-213	ENST00000486695	PTPRC	P08575	1304 aa		11.5	□□□□□ -0.57
KIFC1-213	ENST00000486695	SPATA31A1	Q5TZJ5	1347 aa		11.5	□□□□□ -0.57
KIFC1-213	ENST00000486695	CACNA1F	O60840	1977 aa		11.5	□□□□□ -0.57
KIFC1-213	ENST00000486695	KCNQ3	O43525	872 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	RLBP1	P12271	317 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	VPS72	Q15906	364 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	ITPRIP	Q8IWB1	547 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	SEPT12	Q8IYM1	358 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	SPATA31A5	Q5VU36	1347 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	SPATA31A7	Q8IWB4	1347 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	DISP2	A7MBM2	1401 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	MRC1	P22897	1456 aa		11.49	□□□□□ -0.57
KIFC1-213	ENST00000486695	WNK3	Q9BYP7	1800 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms