RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 NFATC2IPQ8NCF5 419 aa24.24■■□□□ 1.47
COL1A1-207ENST00000486572 LOC102724428A0A0B4J2F2 783 aa24.23■■□□□ 1.47
COL1A1-207ENST00000486572 GNAT3A8MTJ3 354 aa24.23■■□□□ 1.47
COL1A1-207ENST00000486572 SIK1P57059 783 aa24.23■■□□□ 1.47
COL1A1-207ENST00000486572 SLC52A2Q9HAB3 445 aa24.23■■□□□ 1.47
COL1A1-207ENST00000486572 TAF1LQ8IZX4 1826 aa24.23■■□□□ 1.47
COL1A1-207ENST00000486572 QSER1Q2KHR3 1735 aa24.22■■□□□ 1.47
COL1A1-207ENST00000486572 NEFMP07197 916 aa24.2■■□□□ 1.46
COL1A1-207ENST00000486572 PDGFDQ9GZP0 370 aaPredicted RBP24.2■■□□□ 1.46
COL1A1-207ENST00000486572 ZNF831Q5JPB2 1677 aa24.2■■□□□ 1.46
COL1A1-207ENST00000486572 TUBGCP6Q96RT7 1819 aa24.19■■□□□ 1.46
COL1A1-207ENST00000486572 C4BP0C0L5 1744 aa24.19■■□□□ 1.46
COL1A1-207ENST00000486572 PNNQ9H307 717 aaKnown RBP24.19■■□□□ 1.46
COL1A1-207ENST00000486572 TFCP2L1Q9NZI6 479 aa24.19■■□□□ 1.46
COL1A1-207ENST00000486572 ATP6V1AP38606 617 aa24.18■■□□□ 1.46
COL1A1-207ENST00000486572 SRCAPQ6ZRS2 3230 aa24.17■■□□□ 1.46
COL1A1-207ENST00000486572 IL17REQ8NFR9 667 aa24.17■■□□□ 1.46
COL1A1-207ENST00000486572 PLEKHF1Q96S99 279 aa24.17■■□□□ 1.46
COL1A1-207ENST00000486572 RBM42Q9BTD8 480 aaKnown RBP24.17■■□□□ 1.46
COL1A1-207ENST00000486572 CEMIPQ8WUJ3 1361 aa24.16■■□□□ 1.46
COL1A1-207ENST00000486572 PNPLA7Q6ZV29 1317 aa24.16■■□□□ 1.46
COL1A1-207ENST00000486572 ITPK1Q13572 414 aa24.16■■□□□ 1.46
COL1A1-207ENST00000486572 MAPK8IP3Q9UPT6 1336 aa24.15■■□□□ 1.46
COL1A1-207ENST00000486572 TEFQ10587 303 aa24.15■■□□□ 1.46
COL1A1-207ENST00000486572 LINC00116Q8NCU8 138 aa24.15■■□□□ 1.46
COL1A1-207ENST00000486572 SPON1Q9HCB6 807 aa24.15■■□□□ 1.46
COL1A1-207ENST00000486572 PTCD1O75127 700 aaKnown RBP24.14■■□□□ 1.45
COL1A1-207ENST00000486572 WDR43Q15061 677 aaKnown RBP eCLIP24.14■■□□□ 1.45
COL1A1-207ENST00000486572 RTF1Q92541 710 aaKnown RBP24.14■■□□□ 1.45
COL1A1-207ENST00000486572 SLC4A9Q96Q91 983 aa24.14■■□□□ 1.45
COL1A1-207ENST00000486572 SIPA1L3O60292 1781 aaPredicted RBP24.14■■□□□ 1.45
COL1A1-207ENST00000486572 CICQ96RK0 1608 aaPredicted RBP24.13■■□□□ 1.45
COL1A1-207ENST00000486572 ZBTB7AO95365 584 aa24.13■■□□□ 1.45
COL1A1-207ENST00000486572 AK7Q96M32 723 aa24.13■■□□□ 1.45
COL1A1-207ENST00000486572 COL5A3P25940 1745 aaPredicted RBP24.13■■□□□ 1.45
COL1A1-207ENST00000486572 HTATSF1O43719 755 aaKnown RBP24.12■■□□□ 1.45
COL1A1-207ENST00000486572 KCPQ6ZWJ8 1503 aa24.11■■□□□ 1.45
COL1A1-207ENST00000486572 ANP32CO43423 234 aa24.11■■□□□ 1.45
COL1A1-207ENST00000486572 SLC39A6Q13433 755 aa24.11■■□□□ 1.45
COL1A1-207ENST00000486572 MTFR1LQ9H019 292 aa24.11■■□□□ 1.45
COL1A1-207ENST00000486572 TJP1Q07157 1748 aa24.1■■□□□ 1.45
COL1A1-207ENST00000486572 NFE2L2Q16236 605 aa24.1■■□□□ 1.45
COL1A1-207ENST00000486572 MCM10Q7L590 875 aa24.1■■□□□ 1.45
COL1A1-207ENST00000486572 UBR2Q8IWV8 1755 aa24.1■■□□□ 1.45
COL1A1-207ENST00000486572 UBR3Q6ZT12 1888 aa24.09■■□□□ 1.45
COL1A1-207ENST00000486572 SLC16A10Q8TF71 515 aa24.09■■□□□ 1.45
COL1A1-207ENST00000486572 DLG5Q8TDM6 1919 aa24.09■■□□□ 1.45
COL1A1-207ENST00000486572 TTC5Q8N0Z6 440 aa24.08■■□□□ 1.45
COL1A1-207ENST00000486572 FLAD1Q8NFF5 587 aa24.08■■□□□ 1.45
COL1A1-207ENST00000486572 COL23A1Q86Y22 540 aaPredicted RBP24.07■■□□□ 1.44
COL1A1-207ENST00000486572 ATF5Q9Y2D1 282 aaPredicted RBP24.07■■□□□ 1.44
COL1A1-207ENST00000486572 CNTNAP4Q9C0A0 1308 aa24.07■■□□□ 1.44
COL1A1-207ENST00000486572 GNPATO15228 680 aa24.06■■□□□ 1.44
COL1A1-207ENST00000486572 MSH5O43196 834 aa24.06■■□□□ 1.44
COL1A1-207ENST00000486572 DCTN1Q14203 1278 aa24.06■■□□□ 1.44
COL1A1-207ENST00000486572 ADAMTS8Q9UP79 889 aa24.06■■□□□ 1.44
COL1A1-207ENST00000486572 SSFA2P28290 1259 aa24.05■■□□□ 1.44
COL1A1-207ENST00000486572 ZNF790Q6PG37 636 aa24.05■■□□□ 1.44
COL1A1-207ENST00000486572 AMIGO3Q86WK7 504 aa24.05■■□□□ 1.44
COL1A1-207ENST00000486572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.04■■□□□ 1.44
COL1A1-207ENST00000486572 BTBD11A6QL63 1104 aa24.04■■□□□ 1.44
COL1A1-207ENST00000486572 PHF14O94880 888 aa24.04■■□□□ 1.44
COL1A1-207ENST00000486572 PTGER2P43116 358 aa24.04■■□□□ 1.44
COL1A1-207ENST00000486572 RC3H1Q5TC82 1133 aaKnown RBP24.04■■□□□ 1.44
COL1A1-207ENST00000486572 CCDC146Q8IYE0 955 aa24.04■■□□□ 1.44
COL1A1-207ENST00000486572 VSIG10Q8N0Z9 540 aa24.03■■□□□ 1.44
COL1A1-207ENST00000486572 RUNDC1Q96C34 613 aa24.03■■□□□ 1.44
COL1A1-207ENST00000486572 PPP1R1BQ9UD71 204 aaPredicted RBP24.03■■□□□ 1.44
COL1A1-207ENST00000486572 COL24A1Q17RW2 1714 aa24.02■■□□□ 1.44
COL1A1-207ENST00000486572 DNAJC10Q8IXB1 793 aa24.02■■□□□ 1.44
COL1A1-207ENST00000486572 SGIP1Q9BQI5 828 aa24.02■■□□□ 1.44
COL1A1-207ENST00000486572 TMPOP42166 694 aaKnown RBP24.01■■□□□ 1.43
COL1A1-207ENST00000486572 CRKLP46109 303 aaKnown RBP24.01■■□□□ 1.43
COL1A1-207ENST00000486572 ZNF496Q96IT1 587 aaPredicted RBP24.01■■□□□ 1.43
COL1A1-207ENST00000486572 RTCBQ9Y3I0 505 aaKnown RBP24.01■■□□□ 1.43
COL1A1-207ENST00000486572 RIPK4P57078 832 aa24■■□□□ 1.43
COL1A1-207ENST00000486572 CCDC184Q52MB2 194 aa24■■□□□ 1.43
COL1A1-207ENST00000486572 SMIM5Q71RC9 77 aa24■■□□□ 1.43
COL1A1-207ENST00000486572 HEG1Q9ULI3 1381 aa24■■□□□ 1.43
COL1A1-207ENST00000486572 MYH14Q7Z406 1995 aaKnown RBP24■■□□□ 1.43
COL1A1-207ENST00000486572 TAF7Q15545 349 aaPredicted RBP23.99■■□□□ 1.43
COL1A1-207ENST00000486572 FMNL2Q96PY5 1086 aa23.99■■□□□ 1.43
COL1A1-207ENST00000486572 RPS6KA4O75676 772 aa23.98■■□□□ 1.43
COL1A1-207ENST00000486572 ADRA2BP18089 450 aa23.98■■□□□ 1.43
COL1A1-207ENST00000486572 LMOD3Q0VAK6 560 aa23.98■■□□□ 1.43
COL1A1-207ENST00000486572 KCNQ3O43525 872 aa23.97■■□□□ 1.43
COL1A1-207ENST00000486572 CYP19A1P11511 503 aaPredicted RBP23.97■■□□□ 1.43
COL1A1-207ENST00000486572 POLD1P28340 1107 aa23.97■■□□□ 1.43
COL1A1-207ENST00000486572 THUMPD2Q9BTF0 503 aaKnown RBP23.97■■□□□ 1.43
COL1A1-207ENST00000486572 MRS2Q9HD23 443 aa23.97■■□□□ 1.43
COL1A1-207ENST00000486572 CCDC87Q9NVE4 849 aa23.97■■□□□ 1.43
COL1A1-207ENST00000486572 RRP7AQ9Y3A4 280 aaKnown RBP23.97■■□□□ 1.43
COL1A1-207ENST00000486572 TRAPPC3LQ5T215 181 aa23.96■■□□□ 1.43
COL1A1-207ENST00000486572 INTS5Q6P9B9 1019 aaKnown RBP23.96■■□□□ 1.43
COL1A1-207ENST00000486572 MSL1Q68DK7 614 aa23.95■■□□□ 1.42
COL1A1-207ENST00000486572 PNISRQ8TF01 805 aaKnown RBP23.95■■□□□ 1.42
COL1A1-207ENST00000486572 KDM3BQ7LBC6 1761 aa23.95■■□□□ 1.42
COL1A1-207ENST00000486572 C4AP0C0L4 1744 aa23.94■■□□□ 1.42
COL1A1-207ENST00000486572 NEUROD2Q15784 382 aa23.94■■□□□ 1.42
COL1A1-207ENST00000486572 ARXQ96QS3 562 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms