RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	PSME1	Q06323	249 aa		10.07	□□□□□ -0.8
PUDP-204	ENST00000486446	NBPF1	Q3BBV0	1214 aa		10.07	□□□□□ -0.8
PUDP-204	ENST00000486446	PMFBP1	Q8TBY8	1022 aa		10.07	□□□□□ -0.8
PUDP-204	ENST00000486446	TULP4	Q9NRJ4	1543 aa		10.06	□□□□□ -0.8
PUDP-204	ENST00000486446	SPATA31A3	Q5VYP0	1347 aa		10.06	□□□□□ -0.8
PUDP-204	ENST00000486446	FECH	P22830	423 aa		10.05	□□□□□ -0.8
PUDP-204	ENST00000486446	LMOD2	Q6P5Q4	547 aa		10.05	□□□□□ -0.8
PUDP-204	ENST00000486446	CCDC125	Q86Z20	511 aa		10.05	□□□□□ -0.8
PUDP-204	ENST00000486446	PRR36	Q9H6K5	1346 aa		10.05	□□□□□ -0.8
PUDP-204	ENST00000486446	BCAM	P50895	628 aa		10.04	□□□□□ -0.8
PUDP-204	ENST00000486446	USP21	Q9UK80	565 aa		10.04	□□□□□ -0.8
PUDP-204	ENST00000486446	TNS3	Q68CZ2	1445 aa		10.04	□□□□□ -0.8
PUDP-204	ENST00000486446	ITSN1	Q15811	1721 aa		10.04	□□□□□ -0.8
PUDP-204	ENST00000486446	GPRASP1	Q5JY77	1395 aa		10.03	□□□□□ -0.8
PUDP-204	ENST00000486446	YY1	P25490	414 aa		10.03	□□□□□ -0.8
PUDP-204	ENST00000486446	PTPN5	P54829	565 aa		10.03	□□□□□ -0.8
PUDP-204	ENST00000486446	ERICH6	Q7L0X2	663 aa		10.03	□□□□□ -0.8
PUDP-204	ENST00000486446	NGDN	Q8NEJ9	315 aa	Known RBP	10.03	□□□□□ -0.8
PUDP-204	ENST00000486446	CDK19	Q9BWU1	502 aa		10.03	□□□□□ -0.8
PUDP-204	ENST00000486446	MARF1	Q9Y4F3	1742 aa	Known RBP	10.03	□□□□□ -0.8
PUDP-204	ENST00000486446	TRPM1	Q7Z4N2	1603 aa		10.03	□□□□□ -0.8
PUDP-204	ENST00000486446	SBNO1	A3KN83	1393 aa		10.02	□□□□□ -0.8
PUDP-204	ENST00000486446	FAM161A	Q3B820	660 aa		10.02	□□□□□ -0.81
PUDP-204	ENST00000486446	SAMD7	Q7Z3H4	446 aa		10.02	□□□□□ -0.81
PUDP-204	ENST00000486446	RBM46	Q8TBY0	533 aa	Known RBP	10.02	□□□□□ -0.81
PUDP-204	ENST00000486446	NUDT16	Q96DE0	195 aa	Known RBP	10.02	□□□□□ -0.81
PUDP-204	ENST00000486446	LRCH3	Q96II8	777 aa		10.02	□□□□□ -0.81
PUDP-204	ENST00000486446	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.02	□□□□□ -0.81
PUDP-204	ENST00000486446	QRICH2	Q9H0J4	1663 aa		10.02	□□□□□ -0.81
PUDP-204	ENST00000486446	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.02	□□□□□ -0.81
PUDP-204	ENST00000486446	ARHGEF10	O15013	1369 aa		10.01	□□□□□ -0.81
PUDP-204	ENST00000486446	TONSL	Q96HA7	1378 aa		10.01	□□□□□ -0.81
PUDP-204	ENST00000486446	SRPK2	P78362	688 aa	Known RBP	10.01	□□□□□ -0.81
PUDP-204	ENST00000486446	CABLES1	Q8TDN4	633 aa		10.01	□□□□□ -0.81
PUDP-204	ENST00000486446	ATP7B	P35670	1465 aa		10.01	□□□□□ -0.81
PUDP-204	ENST00000486446	ROCK2	O75116	1388 aa	Known RBP	10.01	□□□□□ -0.81
PUDP-204	ENST00000486446	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10	□□□□□ -0.81
PUDP-204	ENST00000486446	OAT	P04181	439 aa		10	□□□□□ -0.81
PUDP-204	ENST00000486446	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10	□□□□□ -0.81
PUDP-204	ENST00000486446	TRPC5	Q9UL62	973 aa	Predicted RBP	10	□□□□□ -0.81
PUDP-204	ENST00000486446	ABCA3	Q99758	1704 aa		9.99	□□□□□ -0.81
PUDP-204	ENST00000486446	PXYLP1	Q8TE99	480 aa		9.99	□□□□□ -0.81
PUDP-204	ENST00000486446	TSR3	Q9UJK0	312 aa	Known RBP	9.99	□□□□□ -0.81
PUDP-204	ENST00000486446	TOPAZ1	Q8N9V7	1692 aa		9.99	□□□□□ -0.81
PUDP-204	ENST00000486446	DNAJB2	P25686	324 aa		9.98	□□□□□ -0.81
PUDP-204	ENST00000486446	NBPF8	Q3BBV2	869 aa		9.98	□□□□□ -0.81
PUDP-204	ENST00000486446	SWT1	Q5T5J6	900 aa	Known RBP	9.98	□□□□□ -0.81
PUDP-204	ENST00000486446	DEFB132	Q7Z7B7	95 aa		9.98	□□□□□ -0.81
PUDP-204	ENST00000486446	METTL3	Q86U44	580 aa	Known RBP	9.98	□□□□□ -0.81
PUDP-204	ENST00000486446	GTF3C3	Q9Y5Q9	886 aa		9.98	□□□□□ -0.81
PUDP-204	ENST00000486446	ALS2	Q96Q42	1657 aa		9.98	□□□□□ -0.81
PUDP-204	ENST00000486446	ATRN	O75882	1429 aa		9.98	□□□□□ -0.81
PUDP-204	ENST00000486446	RCCD1	A6NED2	376 aa		9.97	□□□□□ -0.81
PUDP-204	ENST00000486446	TMEM134	Q9H6X4	195 aa		9.97	□□□□□ -0.81
PUDP-204	ENST00000486446	WBP1L	Q9NX94	342 aa		9.97	□□□□□ -0.81
PUDP-204	ENST00000486446	HPS5	Q9UPZ3	1129 aa		9.97	□□□□□ -0.81
PUDP-204	ENST00000486446	ACE	P12821	1306 aa		9.97	□□□□□ -0.81
PUDP-204	ENST00000486446	PPIP5K1	Q6PFW1	1433 aa		9.97	□□□□□ -0.81
PUDP-204	ENST00000486446	BCL9L	Q86UU0	1499 aa		9.97	□□□□□ -0.81
PUDP-204	ENST00000486446	PLCH1	Q4KWH8	1693 aa		9.96	□□□□□ -0.81
PUDP-204	ENST00000486446	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	9.96	□□□□□ -0.81
PUDP-204	ENST00000486446	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	9.96	□□□□□ -0.82
PUDP-204	ENST00000486446	NYAP1	Q6ZVC0	841 aa		9.96	□□□□□ -0.82
PUDP-204	ENST00000486446	UNC5CL	Q8IV45	518 aa		9.96	□□□□□ -0.82
PUDP-204	ENST00000486446	EVC2	Q86UK5	1308 aa		9.96	□□□□□ -0.82
PUDP-204	ENST00000486446	SLIT2	O94813	1529 aa		9.96	□□□□□ -0.82
PUDP-204	ENST00000486446	EP400	Q96L91	3159 aa		9.96	□□□□□ -0.82
PUDP-204	ENST00000486446	PLEKHG3	A1L390	1219 aa		9.95	□□□□□ -0.82
PUDP-204	ENST00000486446	MAP2K5	Q13163	448 aa		9.95	□□□□□ -0.82
PUDP-204	ENST00000486446	GJD4	Q96KN9	370 aa	Predicted RBP	9.95	□□□□□ -0.82
PUDP-204	ENST00000486446	CARD11	Q9BXL7	1154 aa		9.95	□□□□□ -0.82
PUDP-204	ENST00000486446	CCDC9	Q9Y3X0	531 aa	Known RBP	9.95	□□□□□ -0.82
PUDP-204	ENST00000486446	POLR3A	O14802	1390 aa	Predicted RBP	9.95	□□□□□ -0.82
PUDP-204	ENST00000486446	RALGAPB	Q86X10	1494 aa		9.94	□□□□□ -0.82
PUDP-204	ENST00000486446	PPP4C	P60510	307 aa		9.94	□□□□□ -0.82
PUDP-204	ENST00000486446	NUTM2G	Q5VZR2	741 aa		9.94	□□□□□ -0.82
PUDP-204	ENST00000486446	ZC3H15	Q8WU90	426 aa	Known RBP	9.94	□□□□□ -0.82
PUDP-204	ENST00000486446	ARX	Q96QS3	562 aa		9.94	□□□□□ -0.82
PUDP-204	ENST00000486446	NWD2	Q9ULI1	1742 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	CRYBG1	Q9Y4K1	1723 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	FAM83G	A6ND36	823 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	IRF6	O14896	467 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	SF3B2	Q13435	895 aa	Known RBP	9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	SLF2	Q8IX21	1173 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	ABTB2	Q8N961	1025 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	PHOX2B	Q99453	314 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	CABP1	Q9NZU7	370 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	COL14A1	Q05707	1796 aa	Known RBP	9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	LRP5	O75197	1615 aa		9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	PHRF1	Q9P1Y6	1649 aa	Known RBP	9.93	□□□□□ -0.82
PUDP-204	ENST00000486446	ZMYND10	O75800	440 aa		9.92	□□□□□ -0.82
PUDP-204	ENST00000486446	PRDM11	Q9NQV5	511 aa		9.92	□□□□□ -0.82
PUDP-204	ENST00000486446	BTG4	Q9NY30	223 aa		9.92	□□□□□ -0.82
PUDP-204	ENST00000486446	GLI3	P10071	1580 aa		9.92	□□□□□ -0.82
PUDP-204	ENST00000486446	SENP3-EIF4A1	A0A087X0R7	540 aa		9.91	□□□□□ -0.82
PUDP-204	ENST00000486446	VPS72	Q15906	364 aa		9.91	□□□□□ -0.82
PUDP-204	ENST00000486446	BARGIN	Q6ZT62	677 aa		9.91	□□□□□ -0.82
PUDP-204	ENST00000486446	USP6	P35125	1406 aa		9.9	□□□□□ -0.82
PUDP-204	ENST00000486446	BLM	P54132	1417 aa	Predicted RBP	9.9	□□□□□ -0.82
PUDP-204	ENST00000486446	NRAP	Q86VF7	1730 aa		9.9	□□□□□ -0.82

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