RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 RBM46Q8TBY0 533 aaKnown RBP12.16□□□□□ -0.46
XRN1-212ENST00000486211 CABP1Q9NZU7 370 aa12.16□□□□□ -0.46
XRN1-212ENST00000486211 PCNTO95613 3336 aa12.15□□□□□ -0.46
XRN1-212ENST00000486211 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
XRN1-212ENST00000486211 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
XRN1-212ENST00000486211 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
XRN1-212ENST00000486211 NLRP2Q9NX02 1062 aa12.14□□□□□ -0.47
XRN1-212ENST00000486211 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
XRN1-212ENST00000486211 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
XRN1-212ENST00000486211 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
XRN1-212ENST00000486211 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
XRN1-212ENST00000486211 PLCG2P16885 1265 aa12.12□□□□□ -0.47
XRN1-212ENST00000486211 FSTL1Q12841 308 aa12.12□□□□□ -0.47
XRN1-212ENST00000486211 GSE1Q14687 1217 aa12.12□□□□□ -0.47
XRN1-212ENST00000486211 PCDH10Q9P2E7 1040 aa12.12□□□□□ -0.47
XRN1-212ENST00000486211 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
XRN1-212ENST00000486211 C5P01031 1676 aa12.12□□□□□ -0.47
XRN1-212ENST00000486211 HSPA1AP0DMV8 641 aaKnown RBP12.11□□□□□ -0.47
XRN1-212ENST00000486211 HSPA1BP0DMV9 641 aaKnown RBP12.11□□□□□ -0.47
XRN1-212ENST00000486211 DDX54Q8TDD1 881 aaKnown RBP12.11□□□□□ -0.47
XRN1-212ENST00000486211 SYTL4Q96C24 671 aaPredicted RBP12.11□□□□□ -0.47
XRN1-212ENST00000486211 TOGARAM1Q9Y4F4 1720 aa12.11□□□□□ -0.47
XRN1-212ENST00000486211 KIAA1551Q9HCM1 1747 aa12.1□□□□□ -0.47
XRN1-212ENST00000486211 KIAA1210Q9ULL0 1709 aa12.1□□□□□ -0.47
XRN1-212ENST00000486211 TTC21AQ8NDW8 1320 aa12.1□□□□□ -0.47
XRN1-212ENST00000486211 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
XRN1-212ENST00000486211 CENPJQ9HC77 1338 aaPredicted RBP12.09□□□□□ -0.47
XRN1-212ENST00000486211 LTN1O94822 1766 aa12.08□□□□□ -0.48
XRN1-212ENST00000486211 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
XRN1-212ENST00000486211 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
XRN1-212ENST00000486211 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
XRN1-212ENST00000486211 TAF1LQ8IZX4 1826 aa12.08□□□□□ -0.48
XRN1-212ENST00000486211 C10orf71Q711Q0 1435 aa12.08□□□□□ -0.48
XRN1-212ENST00000486211 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.48
XRN1-212ENST00000486211 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
XRN1-212ENST00000486211 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
XRN1-212ENST00000486211 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
XRN1-212ENST00000486211 USP47Q96K76 1375 aa12.06□□□□□ -0.48
XRN1-212ENST00000486211 KIF13BQ9NQT8 1826 aa12.06□□□□□ -0.48
XRN1-212ENST00000486211 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
XRN1-212ENST00000486211 OCEL1Q9H607 264 aa12.05□□□□□ -0.48
XRN1-212ENST00000486211 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
XRN1-212ENST00000486211 C4BP0C0L5 1744 aa12.05□□□□□ -0.48
XRN1-212ENST00000486211 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
XRN1-212ENST00000486211 FAM208AQ9UK61 1670 aaKnown RBP12.04□□□□□ -0.48
XRN1-212ENST00000486211 PKD1L3Q7Z443 1732 aa12.04□□□□□ -0.48
XRN1-212ENST00000486211 SMIM5Q71RC9 77 aa12.04□□□□□ -0.48
XRN1-212ENST00000486211 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
XRN1-212ENST00000486211 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
XRN1-212ENST00000486211 PLEKHG2Q9H7P9 1386 aa12.04□□□□□ -0.48
XRN1-212ENST00000486211 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
XRN1-212ENST00000486211 N4BP2Q86UW6 1770 aaPredicted RBP12.03□□□□□ -0.48
XRN1-212ENST00000486211 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
XRN1-212ENST00000486211 MEGF6O75095 1541 aa12.02□□□□□ -0.48
XRN1-212ENST00000486211 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
XRN1-212ENST00000486211 C9orf131Q5VYM1 1079 aa12.02□□□□□ -0.49
XRN1-212ENST00000486211 ARHGAP27Q6ZUM4 889 aa12.02□□□□□ -0.49
XRN1-212ENST00000486211 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
XRN1-212ENST00000486211 TNRC6CQ9HCJ0 1690 aaKnown RBP12.02□□□□□ -0.49
XRN1-212ENST00000486211 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.49
XRN1-212ENST00000486211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.01□□□□□ -0.49
XRN1-212ENST00000486211 SMC1BQ8NDV3 1235 aa12.01□□□□□ -0.49
XRN1-212ENST00000486211 KTN1Q86UP2 1357 aaKnown RBP12.01□□□□□ -0.49
XRN1-212ENST00000486211 PALLDQ8WX93 1383 aa12.01□□□□□ -0.49
XRN1-212ENST00000486211 PHF14O94880 888 aa12□□□□□ -0.49
XRN1-212ENST00000486211 TGFB2P61812 414 aa12□□□□□ -0.49
XRN1-212ENST00000486211 NME9Q86XW9 330 aa12□□□□□ -0.49
XRN1-212ENST00000486211 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
XRN1-212ENST00000486211 SPOCK2Q92563 424 aa12□□□□□ -0.49
XRN1-212ENST00000486211 RRAGCQ9HB90 399 aa12□□□□□ -0.49
XRN1-212ENST00000486211 A0A0G2JLW4 131 aa11.99□□□□□ -0.49
XRN1-212ENST00000486211 AK7Q96M32 723 aa11.99□□□□□ -0.49
XRN1-212ENST00000486211 EVC2Q86UK5 1308 aa11.99□□□□□ -0.49
XRN1-212ENST00000486211 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
XRN1-212ENST00000486211 NSD3Q9BZ95 1437 aa11.98□□□□□ -0.49
XRN1-212ENST00000486211 SBNO2Q9Y2G9 1366 aa11.98□□□□□ -0.49
XRN1-212ENST00000486211 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
XRN1-212ENST00000486211 SSFA2P28290 1259 aa11.98□□□□□ -0.49
XRN1-212ENST00000486211 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
XRN1-212ENST00000486211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
XRN1-212ENST00000486211 IP6K1Q92551 441 aa11.98□□□□□ -0.49
XRN1-212ENST00000486211 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
XRN1-212ENST00000486211 MMP10P09238 476 aa11.97□□□□□ -0.49
XRN1-212ENST00000486211 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
XRN1-212ENST00000486211 RGPD2P0DJD1 1756 aa11.97□□□□□ -0.49
XRN1-212ENST00000486211 CD163L1Q9NR16 1453 aa11.96□□□□□ -0.49
XRN1-212ENST00000486211 MAP2P11137 1827 aaKnown RBP11.96□□□□□ -0.49
XRN1-212ENST00000486211 FCHSD2O94868 740 aa11.96□□□□□ -0.49
XRN1-212ENST00000486211 DPEP1P16444 411 aa11.96□□□□□ -0.49
XRN1-212ENST00000486211 KCNA3P22001 575 aa11.96□□□□□ -0.49
XRN1-212ENST00000486211 LTV1Q96GA3 475 aaPredicted RBP11.96□□□□□ -0.49
XRN1-212ENST00000486211 RAB3GAP2Q9H2M9 1393 aa11.95□□□□□ -0.5
XRN1-212ENST00000486211 FOXN1O15353 648 aa11.95□□□□□ -0.5
XRN1-212ENST00000486211 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
XRN1-212ENST00000486211 PRDM10Q9NQV6 1147 aa11.95□□□□□ -0.5
XRN1-212ENST00000486211 LINC00116Q8NCU8 138 aa11.94□□□□□ -0.5
XRN1-212ENST00000486211 DCAF5Q96JK2 942 aa11.94□□□□□ -0.5
XRN1-212ENST00000486211 RNF181Q9P0P0 153 aa11.94□□□□□ -0.5
XRN1-212ENST00000486211 SBF1O95248 1867 aa11.93□□□□□ -0.5
XRN1-212ENST00000486211 PSEN1P49768 467 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms