RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
CLN5-202ENST00000485938 CHAMP1Q96JM3 812 aa27.49■■□□□ 1.99
CLN5-202ENST00000485938 TPM2P07951 284 aa27.48■■□□□ 1.99
CLN5-202ENST00000485938 HSP90AA2PQ14568 343 aaPredicted RBP27.48■■□□□ 1.99
CLN5-202ENST00000485938 TSHZ3Q63HK5 1081 aa27.48■■□□□ 1.99
CLN5-202ENST00000485938 MCM2P49736 904 aa27.47■■□□□ 1.99
CLN5-202ENST00000485938 FMN2Q9NZ56 1722 aa27.47■■□□□ 1.99
CLN5-202ENST00000485938 LRRCC1Q9C099 1032 aa27.47■■□□□ 1.99
CLN5-202ENST00000485938 SSH2Q76I76 1423 aa27.47■■□□□ 1.99
CLN5-202ENST00000485938 TMEM63CQ9P1W3 806 aa27.46■■□□□ 1.99
CLN5-202ENST00000485938 KDRP35968 1356 aa27.46■■□□□ 1.99
CLN5-202ENST00000485938 SOX12O15370 315 aa27.46■■□□□ 1.99
CLN5-202ENST00000485938 MSNP26038 577 aaKnown RBP27.46■■□□□ 1.99
CLN5-202ENST00000485938 ADAMTS13Q76LX8 1427 aa27.46■■□□□ 1.99
CLN5-202ENST00000485938 TMEM2Q9UHN6 1383 aa27.45■■□□□ 1.99
CLN5-202ENST00000485938 NUTM2FA1L443 756 aa27.45■■□□□ 1.99
CLN5-202ENST00000485938 OFD1O75665 1012 aa27.45■■□□□ 1.99
CLN5-202ENST00000485938 MX1P20591 662 aa27.45■■□□□ 1.99
CLN5-202ENST00000485938 CUL4AQ13619 759 aa27.45■■□□□ 1.99
CLN5-202ENST00000485938 LRSAM1Q6UWE0 723 aa27.44■■□□□ 1.98
CLN5-202ENST00000485938 STK31Q9BXU1 1019 aa27.44■■□□□ 1.98
CLN5-202ENST00000485938 PALD1Q9ULE6 856 aa27.44■■□□□ 1.98
CLN5-202ENST00000485938 NSFL1CQ9UNZ2 370 aaKnown RBP27.44■■□□□ 1.98
CLN5-202ENST00000485938 BRD1O95696 1058 aa27.43■■□□□ 1.98
CLN5-202ENST00000485938 CHMLP26374 656 aa27.43■■□□□ 1.98
CLN5-202ENST00000485938 ANAPC15P60006 121 aa27.43■■□□□ 1.98
CLN5-202ENST00000485938 PNMA6EA0A0J9YXQ4 647 aa27.42■■□□□ 1.98
CLN5-202ENST00000485938 GNAI3P08754 354 aa27.42■■□□□ 1.98
CLN5-202ENST00000485938 MCCP23508 829 aa27.42■■□□□ 1.98
CLN5-202ENST00000485938 ATP8B2P98198 1209 aa27.42■■□□□ 1.98
CLN5-202ENST00000485938 KIAA1211Q6ZU35 1233 aa27.42■■□□□ 1.98
CLN5-202ENST00000485938 XRN1Q8IZH2 1706 aaKnown RBP27.42■■□□□ 1.98
CLN5-202ENST00000485938 FOXD4L5Q5VV16 416 aaPredicted RBP27.42■■□□□ 1.98
CLN5-202ENST00000485938 FOXD4L4Q8WXT5 416 aaPredicted RBP27.42■■□□□ 1.98
CLN5-202ENST00000485938 FLIIQ13045 1269 aa27.41■■□□□ 1.98
CLN5-202ENST00000485938 STAP2Q9UGK3 403 aa27.41■■□□□ 1.98
CLN5-202ENST00000485938 NOL7Q9UMY1 257 aaKnown RBP27.41■■□□□ 1.98
CLN5-202ENST00000485938 SBNO1A3KN83 1393 aa27.41■■□□□ 1.98
CLN5-202ENST00000485938 FLT4P35916 1363 aa27.41■■□□□ 1.98
CLN5-202ENST00000485938 FAM208AQ9UK61 1670 aaKnown RBP27.41■■□□□ 1.98
CLN5-202ENST00000485938 MBD3O95983 291 aa27.41■■□□□ 1.98
CLN5-202ENST00000485938 TNRQ92752 1358 aa27.41■■□□□ 1.98
CLN5-202ENST00000485938 IL17RAQ96F46 866 aa27.41■■□□□ 1.98
CLN5-202ENST00000485938 UBR1Q8IWV7 1749 aa27.4■■□□□ 1.98
CLN5-202ENST00000485938 SYCE3A1L190 88 aa27.4■■□□□ 1.98
CLN5-202ENST00000485938 INTS4Q96HW7 963 aaKnown RBP27.4■■□□□ 1.98
CLN5-202ENST00000485938 CEP170BQ9Y4F5 1589 aaPredicted RBP27.4■■□□□ 1.98
CLN5-202ENST00000485938 LRRC37A3O60309 1634 aa27.4■■□□□ 1.98
CLN5-202ENST00000485938 IGSF1Q8N6C5 1336 aa27.39■■□□□ 1.98
CLN5-202ENST00000485938 ANO2Q9NQ90 1003 aa27.39■■□□□ 1.98
CLN5-202ENST00000485938 TTC21AQ8NDW8 1320 aa27.39■■□□□ 1.97
CLN5-202ENST00000485938 FKBP5Q13451 457 aaPredicted RBP27.39■■□□□ 1.97
CLN5-202ENST00000485938 PLPPR3Q6T4P5 718 aa27.39■■□□□ 1.97
CLN5-202ENST00000485938 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.39■■□□□ 1.97
CLN5-202ENST00000485938 CCDC30Q5VVM6 783 aa27.38■■□□□ 1.97
CLN5-202ENST00000485938 EYA1Q99502 592 aa27.38■■□□□ 1.97
CLN5-202ENST00000485938 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.38■■□□□ 1.97
CLN5-202ENST00000485938 RILPL2Q969X0 211 aa27.38■■□□□ 1.97
CLN5-202ENST00000485938 TRIM6-TRIM34B2RNG4 842 aa27.37■■□□□ 1.97
CLN5-202ENST00000485938 SRCIN1Q9C0H9 1055 aa27.37■■□□□ 1.97
CLN5-202ENST00000485938 HTATSF1O43719 755 aaKnown RBP27.36■■□□□ 1.97
CLN5-202ENST00000485938 ZNF500O60304 480 aaPredicted RBP27.36■■□□□ 1.97
CLN5-202ENST00000485938 CEBPAP49715 358 aaPredicted RBP27.36■■□□□ 1.97
CLN5-202ENST00000485938 TRHP20396 242 aaPredicted RBP27.35■■□□□ 1.97
CLN5-202ENST00000485938 GLIPR1L2Q4G1C9 344 aa27.35■■□□□ 1.97
CLN5-202ENST00000485938 N4BP2Q86UW6 1770 aaPredicted RBP27.35■■□□□ 1.97
CLN5-202ENST00000485938 UNC5CLQ8IV45 518 aa27.35■■□□□ 1.97
CLN5-202ENST00000485938 LRRFIP2Q9Y608 721 aaKnown RBP27.34■■□□□ 1.97
CLN5-202ENST00000485938 AOX1Q06278 1338 aa27.34■■□□□ 1.97
CLN5-202ENST00000485938 CACNA1FO60840 1977 aa27.33■■□□□ 1.97
CLN5-202ENST00000485938 TERF1P54274 439 aa27.33■■□□□ 1.97
CLN5-202ENST00000485938 NOL8Q76FK4 1167 aaKnown RBP27.33■■□□□ 1.97
CLN5-202ENST00000485938 PLEKHG1Q9ULL1 1385 aa27.32■■□□□ 1.96
CLN5-202ENST00000485938 AMPHP49418 695 aa27.32■■□□□ 1.96
CLN5-202ENST00000485938 NECTIN2Q92692 538 aa27.32■■□□□ 1.96
CLN5-202ENST00000485938 PXDNLA1KZ92 1463 aa27.31■■□□□ 1.96
CLN5-202ENST00000485938 UPF3BQ9BZI7 483 aaKnown RBP27.31■■□□□ 1.96
CLN5-202ENST00000485938 USP44Q9H0E7 712 aa27.31■■□□□ 1.96
CLN5-202ENST00000485938 ZKSCAN5Q9Y2L8 839 aa27.31■■□□□ 1.96
CLN5-202ENST00000485938 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
CLN5-202ENST00000485938 SOS1Q07889 1333 aaPredicted RBP27.3■■□□□ 1.96
CLN5-202ENST00000485938 GNAT3A8MTJ3 354 aa27.3■■□□□ 1.96
CLN5-202ENST00000485938 EPB41L2O43491 1005 aaKnown RBP27.3■■□□□ 1.96
CLN5-202ENST00000485938 LTKP29376 864 aa27.3■■□□□ 1.96
CLN5-202ENST00000485938 IL25Q9H293 177 aa27.29■■□□□ 1.96
CLN5-202ENST00000485938 MCM5P33992 734 aa27.28■■□□□ 1.96
CLN5-202ENST00000485938 SSH3Q8TE77 659 aa27.28■■□□□ 1.96
CLN5-202ENST00000485938 HSPA4P34932 840 aa27.27■■□□□ 1.96
CLN5-202ENST00000485938 CCDC39Q9UFE4 941 aa27.27■■□□□ 1.96
CLN5-202ENST00000485938 PIK3C2AO00443 1686 aa27.27■■□□□ 1.96
CLN5-202ENST00000485938 UBTFL1P0CB47 393 aaPredicted RBP27.27■■□□□ 1.96
CLN5-202ENST00000485938 RNF214Q8ND24 703 aa27.26■■□□□ 1.95
CLN5-202ENST00000485938 IL17REQ8NFR9 667 aa27.26■■□□□ 1.95
CLN5-202ENST00000485938 SYAP1Q96A49 352 aaPredicted RBP27.26■■□□□ 1.95
CLN5-202ENST00000485938 TSPY26PQ9H489 355 aa27.26■■□□□ 1.95
CLN5-202ENST00000485938 IL1RAPL2Q9NP60 686 aa27.26■■□□□ 1.95
CLN5-202ENST00000485938 XPCQ01831 940 aaPredicted RBP27.25■■□□□ 1.95
CLN5-202ENST00000485938 MAP3K5Q99683 1374 aa27.25■■□□□ 1.95
CLN5-202ENST00000485938 WDR33Q9C0J8 1336 aaKnown RBP27.24■■□□□ 1.95
CLN5-202ENST00000485938 PLEKHG5O94827 1062 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms