RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MYT1Q01538 1121 aa14.75□□□□□ -0.05
SND1-212ENST00000485871 RTF1Q92541 710 aaKnown RBP14.75□□□□□ -0.05
SND1-212ENST00000485871 CFAP44Q96MT7 982 aa14.75□□□□□ -0.05
SND1-212ENST00000485871 CDCA7Q9BWT1 371 aaPredicted RBP14.75□□□□□ -0.05
SND1-212ENST00000485871 DOT1LQ8TEK3 1739 aa14.75□□□□□ -0.05
SND1-212ENST00000485871 CHL1O00533 1208 aa14.74□□□□□ -0.05
SND1-212ENST00000485871 GNAI1P63096 354 aa14.74□□□□□ -0.05
SND1-212ENST00000485871 MYH16Q9H6N6 1097 aa14.74□□□□□ -0.05
SND1-212ENST00000485871 MPRIPQ6WCQ1 1025 aa14.73□□□□□ -0.05
SND1-212ENST00000485871 TSR2Q969E8 191 aaKnown RBP14.73□□□□□ -0.05
SND1-212ENST00000485871 MBIPQ9NS73 344 aa14.73□□□□□ -0.05
SND1-212ENST00000485871 UBR2Q8IWV8 1755 aa14.73□□□□□ -0.05
SND1-212ENST00000485871 YY1P25490 414 aa14.72□□□□□ -0.05
SND1-212ENST00000485871 DCAF5Q96JK2 942 aa14.72□□□□□ -0.05
SND1-212ENST00000485871 BRWD3Q6RI45 1802 aa14.71□□□□□ -0.05
SND1-212ENST00000485871 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.05
SND1-212ENST00000485871 R3HDM1Q15032 1099 aaKnown RBP14.71□□□□□ -0.05
SND1-212ENST00000485871 BABAM1Q9NWV8 329 aa14.71□□□□□ -0.05
SND1-212ENST00000485871 ONECUT3O60422 494 aaPredicted RBP14.7□□□□□ -0.06
SND1-212ENST00000485871 EN1Q05925 392 aaPredicted RBP14.7□□□□□ -0.06
SND1-212ENST00000485871 TAF7Q15545 349 aaPredicted RBP14.7□□□□□ -0.06
SND1-212ENST00000485871 SUPT16HQ9Y5B9 1047 aaKnown RBP14.7□□□□□ -0.06
SND1-212ENST00000485871 EXOC5O00471 708 aa14.69□□□□□ -0.06
SND1-212ENST00000485871 EXOSC9Q06265 439 aaKnown RBP14.69□□□□□ -0.06
SND1-212ENST00000485871 FAM98CQ17RN3 349 aaKnown RBP14.69□□□□□ -0.06
SND1-212ENST00000485871 SLC52A2Q9HAB3 445 aa14.69□□□□□ -0.06
SND1-212ENST00000485871 SBF2Q86WG5 1849 aa14.69□□□□□ -0.06
SND1-212ENST00000485871 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
SND1-212ENST00000485871 DDB1Q16531 1140 aa14.68□□□□□ -0.06
SND1-212ENST00000485871 ERICH6BQ5W0A0 696 aa14.68□□□□□ -0.06
SND1-212ENST00000485871 DDX54Q8TDD1 881 aaKnown RBP14.68□□□□□ -0.06
SND1-212ENST00000485871 LAS1LQ9Y4W2 734 aaKnown RBP14.68□□□□□ -0.06
SND1-212ENST00000485871 C5P01031 1676 aa14.68□□□□□ -0.06
SND1-212ENST00000485871 TEFQ10587 303 aa14.67□□□□□ -0.06
SND1-212ENST00000485871 MARCH10Q8NA82 808 aaPredicted RBP14.67□□□□□ -0.06
SND1-212ENST00000485871 MIS18AQ9NYP9 233 aa14.67□□□□□ -0.06
SND1-212ENST00000485871 RCAN3Q9UKA8 241 aa14.67□□□□□ -0.06
SND1-212ENST00000485871 CACNA1FO60840 1977 aa14.66□□□□□ -0.06
SND1-212ENST00000485871 HEG1Q9ULI3 1381 aa14.66□□□□□ -0.06
SND1-212ENST00000485871 ERVV-2B6SEH9 535 aa14.66□□□□□ -0.06
SND1-212ENST00000485871 CT47B1P0C2W7 299 aaPredicted RBP14.66□□□□□ -0.06
SND1-212ENST00000485871 TSPYL6Q8N831 410 aa14.66□□□□□ -0.06
SND1-212ENST00000485871 C8orf58Q8NAV2 365 aa14.66□□□□□ -0.06
SND1-212ENST00000485871 TSPYL4Q9UJ04 414 aa14.66□□□□□ -0.06
SND1-212ENST00000485871 LAMB4A4D0S4 1761 aa14.65□□□□□ -0.06
SND1-212ENST00000485871 KCNQ3O43525 872 aa14.65□□□□□ -0.06
SND1-212ENST00000485871 VAMP4O75379 141 aa14.65□□□□□ -0.06
SND1-212ENST00000485871 KRT24Q2M2I5 525 aa14.65□□□□□ -0.06
SND1-212ENST00000485871 KCPQ6ZWJ8 1503 aa14.65□□□□□ -0.06
SND1-212ENST00000485871 BCL9O00512 1426 aa14.65□□□□□ -0.06
SND1-212ENST00000485871 NHSQ6T4R5 1651 aa14.65□□□□□ -0.06
SND1-212ENST00000485871 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
SND1-212ENST00000485871 NFATC2IPQ8NCF5 419 aa14.64□□□□□ -0.07
SND1-212ENST00000485871 KAT6BQ8WYB5 2073 aa14.63□□□□□ -0.07
SND1-212ENST00000485871 BTBD11A6QL63 1104 aa14.63□□□□□ -0.07
SND1-212ENST00000485871 EIF4A1P60842 406 aaKnown RBP14.63□□□□□ -0.07
SND1-212ENST00000485871 RARSP54136 660 aaKnown RBP14.62□□□□□ -0.07
SND1-212ENST00000485871 CABP4P57796 275 aa14.62□□□□□ -0.07
SND1-212ENST00000485871 TWISTNBQ3B726 338 aaPredicted RBP14.62□□□□□ -0.07
SND1-212ENST00000485871 CICQ96RK0 1608 aaPredicted RBP14.62□□□□□ -0.07
SND1-212ENST00000485871 FAM182BQ5T319 152 aa14.61□□□□□ -0.07
SND1-212ENST00000485871 ZNF790Q6PG37 636 aa14.61□□□□□ -0.07
SND1-212ENST00000485871 ZNF428Q96B54 188 aa14.61□□□□□ -0.07
SND1-212ENST00000485871 BTAF1O14981 1849 aa14.61□□□□□ -0.07
SND1-212ENST00000485871 SOS1Q07889 1333 aaPredicted RBP14.61□□□□□ -0.07
SND1-212ENST00000485871 SLC39A6Q13433 755 aa14.6□□□□□ -0.07
SND1-212ENST00000485871 EZH2Q15910 746 aaKnown RBP14.6□□□□□ -0.07
SND1-212ENST00000485871 ZNF831Q5JPB2 1677 aa14.59□□□□□ -0.07
SND1-212ENST00000485871 TJP1Q07157 1748 aa14.59□□□□□ -0.07
SND1-212ENST00000485871 ELL2O00472 640 aaPredicted RBP14.59□□□□□ -0.07
SND1-212ENST00000485871 BCAR3O75815 825 aa14.59□□□□□ -0.07
SND1-212ENST00000485871 FKBP8Q14318 412 aa14.59□□□□□ -0.07
SND1-212ENST00000485871 SSH1Q8WYL5 1049 aa14.59□□□□□ -0.07
SND1-212ENST00000485871 PIGBQ92521 554 aa14.59□□□□□ -0.07
SND1-212ENST00000485871 HOXB7P09629 217 aa14.58□□□□□ -0.08
SND1-212ENST00000485871 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
SND1-212ENST00000485871 RRP1P56182 461 aaKnown RBP14.58□□□□□ -0.08
SND1-212ENST00000485871 ALDH1L2Q3SY69 923 aa14.58□□□□□ -0.08
SND1-212ENST00000485871 ZNF496Q96IT1 587 aaPredicted RBP14.58□□□□□ -0.08
SND1-212ENST00000485871 TMOD3Q9NYL9 352 aa14.58□□□□□ -0.08
SND1-212ENST00000485871 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.08
SND1-212ENST00000485871 GIGYF1O75420 1035 aaPredicted RBP14.57□□□□□ -0.08
SND1-212ENST00000485871 ATG3Q9NT62 314 aa14.57□□□□□ -0.08
SND1-212ENST00000485871 LY75O60449 1722 aa14.56□□□□□ -0.08
SND1-212ENST00000485871 PRIM1P49642 420 aaKnown RBP14.56□□□□□ -0.08
SND1-212ENST00000485871 BCL2L13Q9BXK5 485 aa14.56□□□□□ -0.08
SND1-212ENST00000485871 COL5A3P25940 1745 aaPredicted RBP14.55□□□□□ -0.08
SND1-212ENST00000485871 TRIM37O94972 964 aa14.55□□□□□ -0.08
SND1-212ENST00000485871 NBPF14Q5TI25 921 aa14.55□□□□□ -0.08
SND1-212ENST00000485871 MRPL50Q8N5N7 158 aaKnown RBP14.55□□□□□ -0.08
SND1-212ENST00000485871 ASAP1Q9ULH1 1129 aa14.55□□□□□ -0.08
SND1-212ENST00000485871 N4BP2Q86UW6 1770 aaPredicted RBP14.55□□□□□ -0.08
SND1-212ENST00000485871 PRAMEF22A3QJZ6 481 aa14.54□□□□□ -0.08
SND1-212ENST00000485871 APBA3O96018 575 aa14.54□□□□□ -0.08
SND1-212ENST00000485871 ACSBG1Q96GR2 724 aa14.54□□□□□ -0.08
SND1-212ENST00000485871 CAMKK2Q96RR4 588 aa14.54□□□□□ -0.08
SND1-212ENST00000485871 SMC4Q9NTJ3 1288 aa14.54□□□□□ -0.08
SND1-212ENST00000485871 RREB1Q92766 1687 aa14.54□□□□□ -0.08
SND1-212ENST00000485871 KCNQ2O43526 872 aa14.53□□□□□ -0.08
SND1-212ENST00000485871 FAM196AQ6ZSG2 479 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms