RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MFRPQ9BY79 579 aa7.96□□□□□ -1.14
CUX1-208ENST00000485792 TAF1LQ8IZX4 1826 aa7.96□□□□□ -1.14
CUX1-208ENST00000485792 SIPA1L3O60292 1781 aaPredicted RBP7.95□□□□□ -1.14
CUX1-208ENST00000485792 ZBTB7CA1YPR0 619 aa7.95□□□□□ -1.14
CUX1-208ENST00000485792 DEFB132Q7Z7B7 95 aa7.95□□□□□ -1.14
CUX1-208ENST00000485792 PANK3Q9H999 370 aa7.95□□□□□ -1.14
CUX1-208ENST00000485792 USP35Q9P2H5 1018 aa7.95□□□□□ -1.14
CUX1-208ENST00000485792 COLQQ9Y215 455 aaPredicted RBP7.95□□□□□ -1.14
CUX1-208ENST00000485792 COL24A1Q17RW2 1714 aa7.95□□□□□ -1.14
CUX1-208ENST00000485792 POTEFA5A3E0 1075 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 POTEB2H3BUK9 544 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 IRX5P78411 483 aaPredicted RBP7.94□□□□□ -1.14
CUX1-208ENST00000485792 HSP90AB2PQ58FF8 381 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 CCDC125Q86Z20 511 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 USHBP1Q8N6Y0 703 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 MARCH10Q8NA82 808 aaPredicted RBP7.94□□□□□ -1.14
CUX1-208ENST00000485792 ANKRD24Q8TF21 1146 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 IP6K1Q92551 441 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 CARD10Q9BWT7 1032 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 INSRP06213 1382 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 FLT4P35916 1363 aa7.94□□□□□ -1.14
CUX1-208ENST00000485792 SCN11AQ9UI33 1791 aa7.93□□□□□ -1.14
CUX1-208ENST00000485792 NBPF6Q5VWK0 638 aa7.93□□□□□ -1.14
CUX1-208ENST00000485792 TCP11L2Q8N4U5 519 aa7.93□□□□□ -1.14
CUX1-208ENST00000485792 FBXO22Q8NEZ5 403 aa7.93□□□□□ -1.14
CUX1-208ENST00000485792 NBPF4Q96M43 638 aa7.93□□□□□ -1.14
CUX1-208ENST00000485792 OCEL1Q9H607 264 aa7.93□□□□□ -1.14
CUX1-208ENST00000485792 POLKQ9UBT6 870 aa7.93□□□□□ -1.14
CUX1-208ENST00000485792 NPC1L1Q9UHC9 1359 aa7.93□□□□□ -1.14
CUX1-208ENST00000485792 LRP5O75197 1615 aa7.92□□□□□ -1.14
CUX1-208ENST00000485792 CICQ96RK0 1608 aaPredicted RBP7.92□□□□□ -1.14
CUX1-208ENST00000485792 COL5A3P25940 1745 aaPredicted RBP7.92□□□□□ -1.14
CUX1-208ENST00000485792 TJP1Q07157 1748 aa7.92□□□□□ -1.14
CUX1-208ENST00000485792 QSER1Q2KHR3 1735 aa7.92□□□□□ -1.14
CUX1-208ENST00000485792 MAMSTRQ6ZN01 415 aa7.92□□□□□ -1.14
CUX1-208ENST00000485792 KRT27Q7Z3Y8 459 aa7.92□□□□□ -1.14
CUX1-208ENST00000485792 COG3Q96JB2 828 aa7.92□□□□□ -1.14
CUX1-208ENST00000485792 CGNL1Q0VF96 1302 aa7.92□□□□□ -1.14
CUX1-208ENST00000485792 C5P01031 1676 aa7.92□□□□□ -1.14
CUX1-208ENST00000485792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.91□□□□□ -1.143e-9■■□□□ 12.8
CUX1-208ENST00000485792 CCDC9Q9Y3X0 531 aaKnown RBP7.91□□□□□ -1.14
CUX1-208ENST00000485792 KDM6AO15550 1401 aaPredicted RBP7.91□□□□□ -1.14
CUX1-208ENST00000485792 UBR2Q8IWV8 1755 aa7.91□□□□□ -1.14
CUX1-208ENST00000485792 DLG5Q8TDM6 1919 aa7.91□□□□□ -1.14
CUX1-208ENST00000485792 MRC1P22897 1456 aa7.9□□□□□ -1.14
CUX1-208ENST00000485792 PLEKHG2Q9H7P9 1386 aa7.9□□□□□ -1.14
CUX1-208ENST00000485792 IGSF1Q8N6C5 1336 aa7.9□□□□□ -1.14
CUX1-208ENST00000485792 EVA1CP58658 441 aa7.9□□□□□ -1.14
CUX1-208ENST00000485792 AEBP1Q8IUX7 1158 aa7.9□□□□□ -1.14
CUX1-208ENST00000485792 POLR3GLQ9BT43 218 aa7.9□□□□□ -1.14
CUX1-208ENST00000485792 CDCA7Q9BWT1 371 aaPredicted RBP7.9□□□□□ -1.14
CUX1-208ENST00000485792 SCUBE2Q9NQ36 999 aa7.9□□□□□ -1.14
CUX1-208ENST00000485792 KDRP35968 1356 aa7.89□□□□□ -1.15
CUX1-208ENST00000485792 KCNQ2O43526 872 aa7.89□□□□□ -1.15
CUX1-208ENST00000485792 EIF4A2Q14240 407 aaKnown RBP7.89□□□□□ -1.15
CUX1-208ENST00000485792 TOM1L2Q6ZVM7 507 aa7.89□□□□□ -1.15
CUX1-208ENST00000485792 LTV1Q96GA3 475 aaPredicted RBP7.89□□□□□ -1.15
CUX1-208ENST00000485792 MS4A4AQ96JQ5 239 aa7.89□□□□□ -1.15
CUX1-208ENST00000485792 ANO8Q9HCE9 1232 aaPredicted RBP7.89□□□□□ -1.15
CUX1-208ENST00000485792 UBR3Q6ZT12 1888 aa7.89□□□□□ -1.15
CUX1-208ENST00000485792 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
CUX1-208ENST00000485792 C4BP0C0L5 1744 aa7.89□□□□□ -1.15
CUX1-208ENST00000485792 PARD3Q8TEW0 1356 aa7.88□□□□□ -1.15
CUX1-208ENST00000485792 TNNT2P45379 298 aaPredicted RBP7.88□□□□□ -1.15
CUX1-208ENST00000485792 EYA1Q99502 592 aa7.88□□□□□ -1.15
CUX1-208ENST00000485792 ZNF831Q5JPB2 1677 aa7.88□□□□□ -1.15
CUX1-208ENST00000485792 CYP27B1O15528 508 aa7.87□□□□□ -1.15
CUX1-208ENST00000485792 TRIM37O94972 964 aa7.87□□□□□ -1.15
CUX1-208ENST00000485792 POTEJP0CG39 1038 aa7.87□□□□□ -1.15
CUX1-208ENST00000485792 FAM196AQ6ZSG2 479 aa7.87□□□□□ -1.15
CUX1-208ENST00000485792 PDCD7Q8N8D1 485 aaKnown RBP7.87□□□□□ -1.15
CUX1-208ENST00000485792 OTUD5Q96G74 571 aa7.87□□□□□ -1.15
CUX1-208ENST00000485792 CAMKK2Q96RR4 588 aa7.87□□□□□ -1.15
CUX1-208ENST00000485792 PDGFDQ9GZP0 370 aaPredicted RBP7.87□□□□□ -1.15
CUX1-208ENST00000485792 TSHZ2Q9NRE2 1034 aa7.87□□□□□ -1.15
CUX1-208ENST00000485792 MYH14Q7Z406 1995 aaKnown RBP7.86□□□□□ -1.15
CUX1-208ENST00000485792 IL13P35225 146 aa7.86□□□□□ -1.15
CUX1-208ENST00000485792 EN1Q05925 392 aaPredicted RBP7.86□□□□□ -1.15
CUX1-208ENST00000485792 EZH2Q15910 746 aaKnown RBP7.86□□□□□ -1.15
CUX1-208ENST00000485792 NLRP2Q9NX02 1062 aa7.86□□□□□ -1.15
CUX1-208ENST00000485792 KCPQ6ZWJ8 1503 aa7.86□□□□□ -1.15
CUX1-208ENST00000485792 KIAA1551Q9HCM1 1747 aa7.86□□□□□ -1.15
CUX1-208ENST00000485792 DDB1Q16531 1140 aa7.85□□□□□ -1.15
CUX1-208ENST00000485792 CC2D1BQ5T0F9 858 aaKnown RBP7.85□□□□□ -1.15
CUX1-208ENST00000485792 AMIGO3Q86WK7 504 aa7.85□□□□□ -1.15
CUX1-208ENST00000485792 KDM3BQ7LBC6 1761 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 A0A0G2JS52 829 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 EXOC5O00471 708 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 PLSCR1O15162 318 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 PPP1R37O75864 691 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 IL2RBP14784 551 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 AMPHP49418 695 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 MYT1Q01538 1121 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 L3MBTL3Q96JM7 780 aaPredicted RBP7.84□□□□□ -1.15
CUX1-208ENST00000485792 KNSTRNQ9Y448 316 aa7.84□□□□□ -1.15
CUX1-208ENST00000485792 G3V3G9 751 aa7.83□□□□□ -1.16
CUX1-208ENST00000485792 KCNQ4P56696 695 aa7.83□□□□□ -1.16
CUX1-208ENST00000485792 PDE3BQ13370 1112 aa7.83□□□□□ -1.16
CUX1-208ENST00000485792 ACSBG1Q96GR2 724 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 203.6 ms