RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ZNF784Q8NCA9 323 aaPredicted RBP6.57□□□□□ -1.36
RTN4-213ENST00000485749 ZNF395Q9H8N7 513 aaPredicted RBP6.57□□□□□ -1.36
RTN4-213ENST00000485749 H7C1W4 665 aa6.56□□□□□ -1.36
RTN4-213ENST00000485749 GPC1P35052 558 aa6.56□□□□□ -1.36
RTN4-213ENST00000485749 RAB15P59190 212 aa6.56□□□□□ -1.36
RTN4-213ENST00000485749 SUZ12Q15022 739 aaKnown RBP6.56□□□□□ -1.36
RTN4-213ENST00000485749 B4GALNT3Q6L9W6 998 aa6.56□□□□□ -1.36
RTN4-213ENST00000485749 HMX1Q9NP08 348 aaPredicted RBP6.56□□□□□ -1.36
RTN4-213ENST00000485749 GNEQ9Y223 722 aaKnown RBP6.56□□□□□ -1.36
RTN4-213ENST00000485749 IVNS1ABPQ9Y6Y0 642 aa6.56□□□□□ -1.36
RTN4-213ENST00000485749 ERVH48-1M5A8F1 160 aa6.55□□□□□ -1.36
RTN4-213ENST00000485749 GSK3AP49840 483 aa6.55□□□□□ -1.36
RTN4-213ENST00000485749 MCCD1P59942 119 aaPredicted RBP6.55□□□□□ -1.36
RTN4-213ENST00000485749 RNFT1Q5M7Z0 435 aa6.55□□□□□ -1.36
RTN4-213ENST00000485749 RNF20Q5VTR2 975 aa6.55□□□□□ -1.36
RTN4-213ENST00000485749 ZNF428Q96B54 188 aa6.55□□□□□ -1.36
RTN4-213ENST00000485749 TRIM34Q9BYJ4 488 aa6.55□□□□□ -1.36
RTN4-213ENST00000485749 NSFL1CQ9UNZ2 370 aaKnown RBP6.55□□□□□ -1.36
RTN4-213ENST00000485749 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 TMEM88BA6NKF7 163 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 PHF20L1A8MW92 1017 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 ESPNB1AK53 854 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 GPR37L1O60883 481 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 ARHGEF15O94989 841 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 ADAMTS2O95450 1211 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 IRS1P35568 1242 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 RNF144AP50876 292 aaPredicted RBP6.54□□□□□ -1.36
RTN4-213ENST00000485749 PODNQ7Z5L7 613 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 ESF1Q9H501 851 aaKnown RBP6.54□□□□□ -1.36
RTN4-213ENST00000485749 TMPRSS4Q9NRS4 437 aa6.54□□□□□ -1.36
RTN4-213ENST00000485749 BCCIPQ9P287 314 aaKnown RBP eCLIP6.54□□□□□ -1.36
RTN4-213ENST00000485749 ATP5J2-PTCD1G3V325 749 aa6.53□□□□□ -1.36
RTN4-213ENST00000485749 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
RTN4-213ENST00000485749 ZNF326Q5BKZ1 582 aaKnown RBP6.53□□□□□ -1.36
RTN4-213ENST00000485749 TRERF1Q96PN7 1200 aa6.53□□□□□ -1.36
RTN4-213ENST00000485749 OCSTAMPQ9BR26 566 aa6.53□□□□□ -1.36
RTN4-213ENST00000485749 MBIPQ9NS73 344 aa6.53□□□□□ -1.36
RTN4-213ENST00000485749 TFIP11Q9UBB9 837 aaKnown RBP6.53□□□□□ -1.36
RTN4-213ENST00000485749 NISCHQ9Y2I1 1504 aa6.52□□□□□ -1.37
RTN4-213ENST00000485749 SENP3-EIF4A1A0A087X0R7 540 aa6.52□□□□□ -1.37
RTN4-213ENST00000485749 LILRA1O75019 489 aa6.52□□□□□ -1.37
RTN4-213ENST00000485749 VAC14Q08AM6 782 aa6.52□□□□□ -1.37
RTN4-213ENST00000485749 ELOAQ14241 798 aaKnown RBP6.52□□□□□ -1.37
RTN4-213ENST00000485749 NLRP3Q96P20 1036 aa6.52□□□□□ -1.37
RTN4-213ENST00000485749 ZBBXA8MT70 800 aa6.51□□□□□ -1.37
RTN4-213ENST00000485749 ERCC3P19447 782 aa6.51□□□□□ -1.37
RTN4-213ENST00000485749 GPAT2Q6NUI2 795 aa6.51□□□□□ -1.37
RTN4-213ENST00000485749 PRICKLE2Q7Z3G6 844 aa6.51□□□□□ -1.37
RTN4-213ENST00000485749 TRIM22Q8IYM9 498 aa6.51□□□□□ -1.37
RTN4-213ENST00000485749 EPS8L1Q8TE68 723 aa6.51□□□□□ -1.37
RTN4-213ENST00000485749 UCN2Q96RP3 112 aa6.51□□□□□ -1.37
RTN4-213ENST00000485749 ADD1P35611 737 aaKnown RBP6.5□□□□□ -1.37
RTN4-213ENST00000485749 SEMA3FQ13275 785 aa6.5□□□□□ -1.37
RTN4-213ENST00000485749 SLC27A3Q5K4L6 730 aa6.5□□□□□ -1.37
RTN4-213ENST00000485749 CYP2U1Q7Z449 544 aa6.5□□□□□ -1.37
RTN4-213ENST00000485749 BEND7Q8N7W2 519 aaPredicted RBP6.5□□□□□ -1.37
RTN4-213ENST00000485749 CYLDQ9NQC7 956 aa6.5□□□□□ -1.37
RTN4-213ENST00000485749 LRRC4BQ9NT99 713 aa6.5□□□□□ -1.37
RTN4-213ENST00000485749 DYRK1BQ9Y463 629 aa6.5□□□□□ -1.37
RTN4-213ENST00000485749 PCDHB9Q9Y5E1 797 aa6.5□□□□□ -1.37
RTN4-213ENST00000485749 MAFBQ9Y5Q3 323 aaPredicted RBP6.5□□□□□ -1.37
RTN4-213ENST00000485749 MEN1O00255 615 aa6.49□□□□□ -1.37
RTN4-213ENST00000485749 CELA2BP08218 269 aaPredicted RBP6.49□□□□□ -1.37
RTN4-213ENST00000485749 WDR44Q5JSH3 913 aa6.49□□□□□ -1.37
RTN4-213ENST00000485749 CC2D2BQ6DHV5 1058 aa6.49□□□□□ -1.37
RTN4-213ENST00000485749 RIPOR1Q6ZS17 1223 aa6.49□□□□□ -1.37
RTN4-213ENST00000485749 NEDD1Q8NHV4 660 aa6.49□□□□□ -1.37
RTN4-213ENST00000485749 WHAMMQ8TF30 809 aa6.49□□□□□ -1.37
RTN4-213ENST00000485749 USP35Q9P2H5 1018 aa6.49□□□□□ -1.37
RTN4-213ENST00000485749 RBM47A0AV96 593 aaKnown RBP6.48□□□□□ -1.37
RTN4-213ENST00000485749 ATP9BO43861 1147 aa6.48□□□□□ -1.37
RTN4-213ENST00000485749 EIF4G2P78344 907 aaKnown RBP eCLIP6.48□□□□□ -1.37
RTN4-213ENST00000485749 LYPD4Q6UWN0 246 aa6.48□□□□□ -1.37
RTN4-213ENST00000485749 CCER1Q8TC90 406 aaPredicted RBP6.48□□□□□ -1.37
RTN4-213ENST00000485749 ZNF837Q96EG3 531 aaPredicted RBP6.48□□□□□ -1.37
RTN4-213ENST00000485749 GTF2E1P29083 439 aaPredicted RBP6.47□□□□□ -1.37
RTN4-213ENST00000485749 NFATC2IPQ8NCF5 419 aa6.47□□□□□ -1.37
RTN4-213ENST00000485749 IGF1RP08069 1367 aa6.46□□□□□ -1.37
RTN4-213ENST00000485749 A0A1W2PRU2 124 aa6.46□□□□□ -1.38
RTN4-213ENST00000485749 CARNS1A5YM72 827 aa6.46□□□□□ -1.38
RTN4-213ENST00000485749 BCRP11274 1271 aa6.46□□□□□ -1.38
RTN4-213ENST00000485749 RHOQP17081 205 aa6.46□□□□□ -1.38
RTN4-213ENST00000485749 ERVK-9P63128 1117 aa6.46□□□□□ -1.38
RTN4-213ENST00000485749 GAS6Q14393 721 aa6.46□□□□□ -1.38
RTN4-213ENST00000485749 TXNDC2Q86VQ3 553 aa6.46□□□□□ -1.38
RTN4-213ENST00000485749 KDF1Q8NAX2 398 aaPredicted RBP6.46□□□□□ -1.38
RTN4-213ENST00000485749 GAS2L1Q99501 681 aaPredicted RBP6.46□□□□□ -1.38
RTN4-213ENST00000485749 PHF24Q9UPV7 400 aa6.46□□□□□ -1.38
RTN4-213ENST00000485749 MSTNO14793 375 aa6.45□□□□□ -1.38
RTN4-213ENST00000485749 GIGYF1O75420 1035 aaPredicted RBP6.45□□□□□ -1.38
RTN4-213ENST00000485749 CLSTN1O94985 981 aa6.45□□□□□ -1.38
RTN4-213ENST00000485749 MX2P20592 715 aa6.45□□□□□ -1.38
RTN4-213ENST00000485749 MAP2K3P46734 347 aa6.45□□□□□ -1.38
RTN4-213ENST00000485749 CLN3Q13286 438 aa6.45□□□□□ -1.38
RTN4-213ENST00000485749 KANK4Q5T7N3 995 aaPredicted RBP6.45□□□□□ -1.38
RTN4-213ENST00000485749 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
RTN4-213ENST00000485749 TAS1R3Q7RTX0 852 aa6.45□□□□□ -1.38
RTN4-213ENST00000485749 ALYREFQ86V81 257 aaKnown RBP6.45□□□□□ -1.38
RTN4-213ENST00000485749 SPATA31C2B4DYI2 1134 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms