RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
APOE-205ENST00000485628 NHSQ6T4R5 1651 aa20.71■□□□□ 0.91
APOE-205ENST00000485628 NFATC2IPQ8NCF5 419 aa20.71■□□□□ 0.91
APOE-205ENST00000485628 CDCA7LQ96GN5 454 aa20.71■□□□□ 0.91
APOE-205ENST00000485628 EP400Q96L91 3159 aa20.71■□□□□ 0.91
APOE-205ENST00000485628 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
APOE-205ENST00000485628 FAM182BQ5T319 152 aa20.7■□□□□ 0.9
APOE-205ENST00000485628 FAM196AQ6ZSG2 479 aa20.7■□□□□ 0.9
APOE-205ENST00000485628 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
APOE-205ENST00000485628 PIGBQ92521 554 aa20.69■□□□□ 0.9
APOE-205ENST00000485628 YTHDC1Q96MU7 727 aaKnown RBP20.69■□□□□ 0.9
APOE-205ENST00000485628 E9PSI1 815 aa20.68■□□□□ 0.9
APOE-205ENST00000485628 CABP4P57796 275 aa20.68■□□□□ 0.9
APOE-205ENST00000485628 GNAI1P63096 354 aa20.68■□□□□ 0.9
APOE-205ENST00000485628 TEFQ10587 303 aa20.68■□□□□ 0.9
APOE-205ENST00000485628 DUSP27Q5VZP5 1158 aa20.68■□□□□ 0.9
APOE-205ENST00000485628 HEG1Q9ULI3 1381 aa20.68■□□□□ 0.9
APOE-205ENST00000485628 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
APOE-205ENST00000485628 KCNQ2O43526 872 aa20.67■□□□□ 0.9
APOE-205ENST00000485628 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
APOE-205ENST00000485628 MBIPQ9NS73 344 aa20.66■□□□□ 0.9
APOE-205ENST00000485628 PTF1AQ7RTS3 328 aa20.65■□□□□ 0.9
APOE-205ENST00000485628 FANCIQ9NVI1 1328 aa20.64■□□□□ 0.89
APOE-205ENST00000485628 BTBD11A6QL63 1104 aa20.64■□□□□ 0.89
APOE-205ENST00000485628 ACSBG1Q96GR2 724 aa20.64■□□□□ 0.89
APOE-205ENST00000485628 BCL11BQ9C0K0 894 aaPredicted RBP20.64■□□□□ 0.89
APOE-205ENST00000485628 TMOD3Q9NYL9 352 aa20.64■□□□□ 0.89
APOE-205ENST00000485628 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
APOE-205ENST00000485628 BTAF1O14981 1849 aa20.63■□□□□ 0.89
APOE-205ENST00000485628 KCNQ3O43525 872 aa20.63■□□□□ 0.89
APOE-205ENST00000485628 ZNF790Q6PG37 636 aa20.63■□□□□ 0.89
APOE-205ENST00000485628 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
APOE-205ENST00000485628 KCPQ6ZWJ8 1503 aa20.63■□□□□ 0.89
APOE-205ENST00000485628 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
APOE-205ENST00000485628 MYH16Q9H6N6 1097 aa20.62■□□□□ 0.89
APOE-205ENST00000485628 SLC39A6Q13433 755 aa20.61■□□□□ 0.89
APOE-205ENST00000485628 TSR2Q969E8 191 aaKnown RBP20.61■□□□□ 0.89
APOE-205ENST00000485628 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
APOE-205ENST00000485628 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
APOE-205ENST00000485628 ZNF831Q5JPB2 1677 aa20.61■□□□□ 0.89
APOE-205ENST00000485628 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
APOE-205ENST00000485628 TNS1Q9HBL0 1735 aaKnown RBP20.58■□□□□ 0.89
APOE-205ENST00000485628 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.89
APOE-205ENST00000485628 LY75O60449 1722 aa20.58■□□□□ 0.88
APOE-205ENST00000485628 C8orf58Q8NAV2 365 aa20.57■□□□□ 0.88
APOE-205ENST00000485628 SYTL4Q96C24 671 aaPredicted RBP20.57■□□□□ 0.88
APOE-205ENST00000485628 ZNF496Q96IT1 587 aaPredicted RBP20.57■□□□□ 0.88
APOE-205ENST00000485628 TRIM37O94972 964 aa20.56■□□□□ 0.88
APOE-205ENST00000485628 SLC4A9Q96Q91 983 aa20.56■□□□□ 0.88
APOE-205ENST00000485628 SOS1Q07889 1333 aaPredicted RBP20.55■□□□□ 0.88
APOE-205ENST00000485628 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
APOE-205ENST00000485628 EXOSC9Q06265 439 aaKnown RBP20.55■□□□□ 0.88
APOE-205ENST00000485628 KRT24Q2M2I5 525 aa20.55■□□□□ 0.88
APOE-205ENST00000485628 VSIG10Q8N0Z9 540 aa20.55■□□□□ 0.88
APOE-205ENST00000485628 TSPYL6Q8N831 410 aa20.55■□□□□ 0.88
APOE-205ENST00000485628 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
APOE-205ENST00000485628 VAMP4O75379 141 aa20.54■□□□□ 0.88
APOE-205ENST00000485628 HOXB7P09629 217 aa20.54■□□□□ 0.88
APOE-205ENST00000485628 PLSCR1O15162 318 aa20.53■□□□□ 0.88
APOE-205ENST00000485628 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
APOE-205ENST00000485628 FMNL2Q96PY5 1086 aa20.53■□□□□ 0.88
APOE-205ENST00000485628 PALLDQ8WX93 1383 aa20.53■□□□□ 0.88
APOE-205ENST00000485628 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
APOE-205ENST00000485628 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
APOE-205ENST00000485628 C5P01031 1676 aa20.52■□□□□ 0.88
APOE-205ENST00000485628 TTC5Q8N0Z6 440 aa20.52■□□□□ 0.88
APOE-205ENST00000485628 TJP1Q07157 1748 aa20.52■□□□□ 0.88
APOE-205ENST00000485628 LOC102724428A0A0B4J2F2 783 aa20.5■□□□□ 0.87
APOE-205ENST00000485628 SNRPA1P09661 255 aaKnown RBP20.5■□□□□ 0.87
APOE-205ENST00000485628 SIK1P57059 783 aa20.5■□□□□ 0.87
APOE-205ENST00000485628 PRAMEF22A3QJZ6 481 aa20.49■□□□□ 0.87
APOE-205ENST00000485628 TWISTNBQ3B726 338 aaPredicted RBP20.49■□□□□ 0.87
APOE-205ENST00000485628 PROM2Q8N271 834 aa20.49■□□□□ 0.87
APOE-205ENST00000485628 ZNF428Q96B54 188 aa20.49■□□□□ 0.87
APOE-205ENST00000485628 LAMB4A4D0S4 1761 aa20.49■□□□□ 0.87
APOE-205ENST00000485628 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
APOE-205ENST00000485628 COL5A3P25940 1745 aaPredicted RBP20.47■□□□□ 0.87
APOE-205ENST00000485628 ILDR2Q71H61 639 aa20.47■□□□□ 0.87
APOE-205ENST00000485628 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
APOE-205ENST00000485628 TAF1LQ8IZX4 1826 aa20.47■□□□□ 0.87
APOE-205ENST00000485628 RREB1Q92766 1687 aa20.46■□□□□ 0.87
APOE-205ENST00000485628 ITPK1Q13572 414 aa20.46■□□□□ 0.87
APOE-205ENST00000485628 CCDC125Q86Z20 511 aa20.46■□□□□ 0.87
APOE-205ENST00000485628 TEX13AQ9BXU3 409 aaPredicted RBP20.46■□□□□ 0.87
APOE-205ENST00000485628 CACNA1FO60840 1977 aa20.46■□□□□ 0.87
APOE-205ENST00000485628 ELL2O00472 640 aaPredicted RBP20.45■□□□□ 0.86
APOE-205ENST00000485628 BRPF1P55201 1214 aaPredicted RBP20.45■□□□□ 0.86
APOE-205ENST00000485628 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
APOE-205ENST00000485628 APBA3O96018 575 aa20.44■□□□□ 0.86
APOE-205ENST00000485628 CYP19A1P11511 503 aaPredicted RBP20.44■□□□□ 0.86
APOE-205ENST00000485628 PDIA6Q15084 440 aa20.44■□□□□ 0.86
APOE-205ENST00000485628 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
APOE-205ENST00000485628 DNAJC10Q8IXB1 793 aa20.44■□□□□ 0.86
APOE-205ENST00000485628 CAMKK2Q96RR4 588 aa20.44■□□□□ 0.86
APOE-205ENST00000485628 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
APOE-205ENST00000485628 LRRC4BQ9NT99 713 aa20.44■□□□□ 0.86
APOE-205ENST00000485628 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
APOE-205ENST00000485628 LRP10Q7Z4F1 713 aa20.43■□□□□ 0.86
APOE-205ENST00000485628 ATP6V1AP38606 617 aa20.42■□□□□ 0.86
APOE-205ENST00000485628 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms