RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 ITPK1Q13572 414 aa16.45■□□□□ 0.22
LDLRAP1-206ENST00000485476 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
LDLRAP1-206ENST00000485476 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
LDLRAP1-206ENST00000485476 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
LDLRAP1-206ENST00000485476 ITGB4P16144 1822 aa16.45■□□□□ 0.22
LDLRAP1-206ENST00000485476 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
LDLRAP1-206ENST00000485476 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
LDLRAP1-206ENST00000485476 AMOTQ4VCS5 1084 aa16.44■□□□□ 0.22
LDLRAP1-206ENST00000485476 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
LDLRAP1-206ENST00000485476 MAP2P11137 1827 aaKnown RBP16.44■□□□□ 0.22
LDLRAP1-206ENST00000485476 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
LDLRAP1-206ENST00000485476 UBR3Q6ZT12 1888 aa16.44■□□□□ 0.22
LDLRAP1-206ENST00000485476 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
LDLRAP1-206ENST00000485476 MMP10P09238 476 aa16.42■□□□□ 0.22
LDLRAP1-206ENST00000485476 CNTNAP4Q9C0A0 1308 aa16.42■□□□□ 0.22
LDLRAP1-206ENST00000485476 KDRP35968 1356 aa16.41■□□□□ 0.22
LDLRAP1-206ENST00000485476 RPS6KA4O75676 772 aa16.4■□□□□ 0.22
LDLRAP1-206ENST00000485476 CCDC87Q9NVE4 849 aa16.4■□□□□ 0.22
LDLRAP1-206ENST00000485476 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
LDLRAP1-206ENST00000485476 CICQ96RK0 1608 aaPredicted RBP16.39■□□□□ 0.21
LDLRAP1-206ENST00000485476 KIF3CO14782 793 aa16.38■□□□□ 0.21
LDLRAP1-206ENST00000485476 RFC4P35249 363 aa16.38■□□□□ 0.21
LDLRAP1-206ENST00000485476 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
LDLRAP1-206ENST00000485476 ARHGEF1Q92888 912 aaKnown RBP16.38■□□□□ 0.21
LDLRAP1-206ENST00000485476 SLC4A9Q96Q91 983 aa16.37■□□□□ 0.21
LDLRAP1-206ENST00000485476 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
LDLRAP1-206ENST00000485476 PARP3Q9Y6F1 533 aa16.37■□□□□ 0.21
LDLRAP1-206ENST00000485476 C10orf71Q711Q0 1435 aa16.36■□□□□ 0.21
LDLRAP1-206ENST00000485476 PXDNLA1KZ92 1463 aa16.36■□□□□ 0.21
LDLRAP1-206ENST00000485476 GYS1P13807 737 aa16.36■□□□□ 0.21
LDLRAP1-206ENST00000485476 CABP4P57796 275 aa16.36■□□□□ 0.21
LDLRAP1-206ENST00000485476 ZNF530Q6P9A1 599 aaPredicted RBP16.36■□□□□ 0.21
LDLRAP1-206ENST00000485476 TOMM70O94826 608 aa16.35■□□□□ 0.21
LDLRAP1-206ENST00000485476 MTHFSP49914 203 aa16.35■□□□□ 0.21
LDLRAP1-206ENST00000485476 APLP1P51693 650 aa16.35■□□□□ 0.21
LDLRAP1-206ENST00000485476 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
LDLRAP1-206ENST00000485476 C1orf141Q5JVX7 400 aa16.35■□□□□ 0.21
LDLRAP1-206ENST00000485476 ZNF526Q8TF50 670 aaPredicted RBP16.35■□□□□ 0.21
LDLRAP1-206ENST00000485476 PANK3Q9H999 370 aa16.34■□□□□ 0.21
LDLRAP1-206ENST00000485476 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
LDLRAP1-206ENST00000485476 KIF13BQ9NQT8 1826 aa16.33■□□□□ 0.21
LDLRAP1-206ENST00000485476 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
LDLRAP1-206ENST00000485476 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
LDLRAP1-206ENST00000485476 KDM6AO15550 1401 aaPredicted RBP16.32■□□□□ 0.2
LDLRAP1-206ENST00000485476 DPEP1P16444 411 aa16.32■□□□□ 0.2
LDLRAP1-206ENST00000485476 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
LDLRAP1-206ENST00000485476 PIM2Q9P1W9 311 aa16.32■□□□□ 0.2
LDLRAP1-206ENST00000485476 FCHSD2O94868 740 aa16.31■□□□□ 0.2
LDLRAP1-206ENST00000485476 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
LDLRAP1-206ENST00000485476 KCNA3P22001 575 aa16.3■□□□□ 0.2
LDLRAP1-206ENST00000485476 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
LDLRAP1-206ENST00000485476 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
LDLRAP1-206ENST00000485476 USP42Q9H9J4 1324 aaKnown RBP16.29■□□□□ 0.2
LDLRAP1-206ENST00000485476 CRKLP46109 303 aaKnown RBP16.29■□□□□ 0.2
LDLRAP1-206ENST00000485476 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
LDLRAP1-206ENST00000485476 RBM46Q8TBY0 533 aaKnown RBP16.29■□□□□ 0.2
LDLRAP1-206ENST00000485476 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
LDLRAP1-206ENST00000485476 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
LDLRAP1-206ENST00000485476 IL13P35225 146 aa16.28■□□□□ 0.2
LDLRAP1-206ENST00000485476 DALRD3Q5D0E6 543 aaKnown RBP16.28■□□□□ 0.2
LDLRAP1-206ENST00000485476 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
LDLRAP1-206ENST00000485476 KNSTRNQ9Y448 316 aa16.28■□□□□ 0.2
LDLRAP1-206ENST00000485476 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
LDLRAP1-206ENST00000485476 HSPA5P11021 654 aaKnown RBP16.27■□□□□ 0.2
LDLRAP1-206ENST00000485476 TM4SF1P30408 202 aa16.27■□□□□ 0.2
LDLRAP1-206ENST00000485476 FSTL1Q12841 308 aa16.27■□□□□ 0.2
LDLRAP1-206ENST00000485476 ZC3H4Q9UPT8 1303 aaKnown RBP16.26■□□□□ 0.19
LDLRAP1-206ENST00000485476 COL5A3P25940 1745 aaPredicted RBP16.26■□□□□ 0.19
LDLRAP1-206ENST00000485476 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
LDLRAP1-206ENST00000485476 C9orf131Q5VYM1 1079 aa16.26■□□□□ 0.19
LDLRAP1-206ENST00000485476 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
LDLRAP1-206ENST00000485476 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
LDLRAP1-206ENST00000485476 DNAJC5GQ8N7S2 189 aa16.26■□□□□ 0.19
LDLRAP1-206ENST00000485476 KDM2BQ8NHM5 1336 aa16.25■□□□□ 0.19
LDLRAP1-206ENST00000485476 ZPR1O75312 459 aa16.25■□□□□ 0.19
LDLRAP1-206ENST00000485476 FKBP8Q14318 412 aa16.25■□□□□ 0.19
LDLRAP1-206ENST00000485476 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
LDLRAP1-206ENST00000485476 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
LDLRAP1-206ENST00000485476 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
LDLRAP1-206ENST00000485476 DDR1Q08345 913 aa16.24■□□□□ 0.19
LDLRAP1-206ENST00000485476 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
LDLRAP1-206ENST00000485476 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
LDLRAP1-206ENST00000485476 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
LDLRAP1-206ENST00000485476 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
LDLRAP1-206ENST00000485476 NMRK2Q9NPI5 230 aa16.22■□□□□ 0.19
LDLRAP1-206ENST00000485476 NARFQ9UHQ1 456 aa16.22■□□□□ 0.19
LDLRAP1-206ENST00000485476 CYP19A1P11511 503 aaPredicted RBP16.21■□□□□ 0.19
LDLRAP1-206ENST00000485476 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
LDLRAP1-206ENST00000485476 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
LDLRAP1-206ENST00000485476 N4BP2Q86UW6 1770 aaPredicted RBP16.21■□□□□ 0.18
LDLRAP1-206ENST00000485476 ARFGEF1Q9Y6D6 1849 aa16.2■□□□□ 0.18
LDLRAP1-206ENST00000485476 RNMTO43148 476 aaKnown RBP16.2■□□□□ 0.18
LDLRAP1-206ENST00000485476 DNAJC10Q8IXB1 793 aa16.2■□□□□ 0.18
LDLRAP1-206ENST00000485476 BRCA1P38398 1863 aaKnown RBP16.2■□□□□ 0.18
LDLRAP1-206ENST00000485476 USPL1Q5W0Q7 1092 aa16.19■□□□□ 0.18
LDLRAP1-206ENST00000485476 RNF181Q9P0P0 153 aa16.19■□□□□ 0.18
LDLRAP1-206ENST00000485476 MRC1P22897 1456 aa16.18■□□□□ 0.18
LDLRAP1-206ENST00000485476 A0A087WZG4 1122 aa16.18■□□□□ 0.18
LDLRAP1-206ENST00000485476 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
LDLRAP1-206ENST00000485476 TEX13AQ9BXU3 409 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms