RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 KIF15Q9NS87 1388 aa8.12□□□□□ -1.11
NHLRC3-205ENST00000485407 RBM47A0AV96 593 aaKnown RBP8.12□□□□□ -1.11
NHLRC3-205ENST00000485407 KIF3BO15066 747 aa8.12□□□□□ -1.11
NHLRC3-205ENST00000485407 PPP4CP60510 307 aa8.12□□□□□ -1.11
NHLRC3-205ENST00000485407 USP46P62068 366 aa8.12□□□□□ -1.11
NHLRC3-205ENST00000485407 TBC1D9Q6ZT07 1266 aa8.12□□□□□ -1.11
NHLRC3-205ENST00000485407 PNMA1Q8ND90 353 aa8.12□□□□□ -1.11
NHLRC3-205ENST00000485407 TMEM134Q9H6X4 195 aa8.12□□□□□ -1.11
NHLRC3-205ENST00000485407 CEP170BQ9Y4F5 1589 aaPredicted RBP8.11□□□□□ -1.11
NHLRC3-205ENST00000485407 HOXA2O43364 376 aa8.11□□□□□ -1.11
NHLRC3-205ENST00000485407 RGS20O76081 388 aa8.11□□□□□ -1.11
NHLRC3-205ENST00000485407 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
NHLRC3-205ENST00000485407 RRP7BPQ9NSQ0 103 aa8.11□□□□□ -1.11
NHLRC3-205ENST00000485407 VWDEQ8N2E2 1590 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 ATP9BO43861 1147 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 HSP90B1P14625 803 aaKnown RBP8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 GUCA2AQ02747 115 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 KCNC4Q03721 635 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 MTMR2Q13614 643 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 GGT6Q6P531 493 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 EPS8L1Q8TE68 723 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 CHIC2Q9UKJ5 165 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 PCDHGC3Q9UN70 934 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 MYO3AQ8NEV4 1616 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 RNF17Q9BXT8 1623 aaKnown RBP8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 ZMYM3Q14202 1370 aa8.1□□□□□ -1.11
NHLRC3-205ENST00000485407 LRRC7Q96NW7 1537 aa8.09□□□□□ -1.11
NHLRC3-205ENST00000485407 MROH2AA6NES4 1674 aa8.09□□□□□ -1.11
NHLRC3-205ENST00000485407 ANKRD50Q9ULJ7 1429 aa8.09□□□□□ -1.11
NHLRC3-205ENST00000485407 WASHC2CQ9Y4E1 1318 aa8.08□□□□□ -1.12
NHLRC3-205ENST00000485407 GCGRP47871 477 aa8.08□□□□□ -1.12
NHLRC3-205ENST00000485407 EIF4G2P78344 907 aaKnown RBP eCLIP8.08□□□□□ -1.12
NHLRC3-205ENST00000485407 TMEM164Q5U3C3 297 aa8.08□□□□□ -1.12
NHLRC3-205ENST00000485407 NEURL4Q96JN8 1562 aa8.08□□□□□ -1.12
NHLRC3-205ENST00000485407 KDM5DQ9BY66 1539 aa8.08□□□□□ -1.12
NHLRC3-205ENST00000485407 FAM135BQ49AJ0 1406 aa8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 RNF40O75150 1001 aa8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 HDGFP51858 240 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 SWT1Q5T5J6 900 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 ZNF772Q68DY9 489 aaPredicted RBP8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 HLA-CQ95604 372 aa8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 MRRFQ96E11 262 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 ZC3H13Q5T200 1668 aaKnown RBP8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 KANK1Q14678 1352 aa8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 DEPDC5O75140 1603 aa8.07□□□□□ -1.12
NHLRC3-205ENST00000485407 SETBP1Q9Y6X0 1596 aa8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 CFAP99D6REC4 459 aa8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 C6orf229H3BNL8 230 aa8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 ERCC3P19447 782 aa8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 CDK11BP21127 795 aaKnown RBP8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 ELOAQ14241 798 aaKnown RBP8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 STK32AQ8WU08 396 aa8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 NOVA2Q9UNW9 492 aaKnown RBP8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 PRDM15P57071 1507 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 POLR1AO95602 1720 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 CDK12Q9NYV4 1490 aaPredicted RBP8.06□□□□□ -1.12
NHLRC3-205ENST00000485407 RXRBP28702 533 aa8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 ARID4AP29374 1257 aaPredicted RBP8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 ITGAEP38570 1179 aa8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 NR6A1Q15406 480 aa8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 TJAP1Q5JTD0 557 aa8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 TXNDC2Q86VQ3 553 aa8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 SLF2Q8IX21 1173 aa8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 PUS7Q96PZ0 661 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 ZMIZ1Q9ULJ6 1067 aa8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 A2ML1A8K2U0 1454 aa8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 CLTCQ00610 1675 aaKnown RBP8.05□□□□□ -1.12
NHLRC3-205ENST00000485407 HFM1A2PYH4 1435 aa8.04□□□□□ -1.12
NHLRC3-205ENST00000485407 ARHGAP31Q2M1Z3 1444 aa8.04□□□□□ -1.12
NHLRC3-205ENST00000485407 MROH1Q8NDA8 1641 aa8.04□□□□□ -1.12
NHLRC3-205ENST00000485407 APLP1P51693 650 aa8.04□□□□□ -1.12
NHLRC3-205ENST00000485407 IGSF5Q9NSI5 407 aa8.04□□□□□ -1.12
NHLRC3-205ENST00000485407 SYNMO15061 1565 aa8.04□□□□□ -1.12
NHLRC3-205ENST00000485407 NAIPQ13075 1403 aa8.03□□□□□ -1.12
NHLRC3-205ENST00000485407 ABCC3O15438 1527 aa8.03□□□□□ -1.12
NHLRC3-205ENST00000485407 LMTK2Q8IWU2 1503 aa8.03□□□□□ -1.12
NHLRC3-205ENST00000485407 PZPP20742 1482 aa8.03□□□□□ -1.12
NHLRC3-205ENST00000485407 MTRQ99707 1265 aa8.03□□□□□ -1.12
NHLRC3-205ENST00000485407 BCL2L13Q9BXK5 485 aa8.03□□□□□ -1.12
NHLRC3-205ENST00000485407 KIAA1522Q9P206 1035 aaPredicted RBP8.03□□□□□ -1.12
NHLRC3-205ENST00000485407 GCC2Q8IWJ2 1684 aa8.02□□□□□ -1.13
NHLRC3-205ENST00000485407 PHLDB3Q6NSJ2 640 aa8.02□□□□□ -1.13
NHLRC3-205ENST00000485407 DNAJC14Q6Y2X3 702 aaPredicted RBP8.02□□□□□ -1.13
NHLRC3-205ENST00000485407 ANKLE2Q86XL3 938 aa8.02□□□□□ -1.13
NHLRC3-205ENST00000485407 SIRT1Q96EB6 747 aa8.02□□□□□ -1.13
NHLRC3-205ENST00000485407 UNC13BO14795 1591 aa8.01□□□□□ -1.13
NHLRC3-205ENST00000485407 MED14O60244 1454 aa8.01□□□□□ -1.13
NHLRC3-205ENST00000485407 RPRD2Q5VT52 1461 aaKnown RBP8.01□□□□□ -1.13
NHLRC3-205ENST00000485407 IL21Q9HBE4 155 aa8.01□□□□□ -1.13
NHLRC3-205ENST00000485407 STRCP1A6NGW2 1772 aa8.01□□□□□ -1.13
NHLRC3-205ENST00000485407 NPHP4O75161 1426 aaPredicted RBP8.01□□□□□ -1.13
NHLRC3-205ENST00000485407 NUP155O75694 1391 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 JCADQ9P266 1359 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 CFAP65Q6ZU64 1925 aaKnown RBP8□□□□□ -1.13
NHLRC3-205ENST00000485407 USP17L3A6NCW0 530 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 USP17L4A6NCW7 530 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 PIK3CDO00329 1044 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 SKIP12755 728 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 ZNF16P17020 682 aaPredicted RBP8□□□□□ -1.13
NHLRC3-205ENST00000485407 SLC4A3P48751 1232 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms