RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 RNF25Q96BH1 459 aaPredicted RBP11.43□□□□□ -0.58
USP16-206ENST00000485067 ZBTB40Q9NUA8 1239 aa11.43□□□□□ -0.58
USP16-206ENST00000485067 PEAK1Q9H792 1746 aa11.42□□□□□ -0.58
USP16-206ENST00000485067 DIP2AQ14689 1571 aa11.42□□□□□ -0.58
USP16-206ENST00000485067 CEP170BQ9Y4F5 1589 aaPredicted RBP11.42□□□□□ -0.58
USP16-206ENST00000485067 DCTN1Q14203 1278 aa11.42□□□□□ -0.58
USP16-206ENST00000485067 NUTM2GQ5VZR2 741 aa11.42□□□□□ -0.58
USP16-206ENST00000485067 USP19O94966 1318 aa11.42□□□□□ -0.58
USP16-206ENST00000485067 RAD21O60216 631 aa11.42□□□□□ -0.58
USP16-206ENST00000485067 HSP90AB2PQ58FF8 381 aa11.42□□□□□ -0.58
USP16-206ENST00000485067 TMEM57Q8N5G2 664 aa11.42□□□□□ -0.58
USP16-206ENST00000485067 EIF4A2Q14240 407 aaKnown RBP11.41□□□□□ -0.58
USP16-206ENST00000485067 BECN1Q14457 450 aa11.41□□□□□ -0.58
USP16-206ENST00000485067 SMC5Q8IY18 1101 aa11.41□□□□□ -0.58
USP16-206ENST00000485067 ZHX1Q9UKY1 873 aaPredicted RBP11.41□□□□□ -0.58
USP16-206ENST00000485067 XRN1Q8IZH2 1706 aaKnown RBP11.41□□□□□ -0.58
USP16-206ENST00000485067 OVOS2A0A0J9YW53 1432 aa11.41□□□□□ -0.58
USP16-206ENST00000485067 PTCH1Q13635 1447 aa11.41□□□□□ -0.58
USP16-206ENST00000485067 OVOS2Q6IE36 1432 aa11.41□□□□□ -0.58
USP16-206ENST00000485067 PIK3R4Q99570 1358 aa11.41□□□□□ -0.58
USP16-206ENST00000485067 VAMP4O75379 141 aa11.4□□□□□ -0.58
USP16-206ENST00000485067 SSH2Q76I76 1423 aa11.4□□□□□ -0.58
USP16-206ENST00000485067 RBM25P49756 843 aaKnown RBP11.4□□□□□ -0.58
USP16-206ENST00000485067 GPBP1L1Q9HC44 474 aaPredicted RBP11.4□□□□□ -0.58
USP16-206ENST00000485067 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
USP16-206ENST00000485067 TAF3Q5VWG9 929 aa11.39□□□□□ -0.59
USP16-206ENST00000485067 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
USP16-206ENST00000485067 TSPYL6Q8N831 410 aa11.39□□□□□ -0.59
USP16-206ENST00000485067 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
USP16-206ENST00000485067 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
USP16-206ENST00000485067 USP31Q70CQ4 1352 aa11.39□□□□□ -0.59
USP16-206ENST00000485067 TTC21AQ8NDW8 1320 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 GSE1Q14687 1217 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 KCTD17Q8N5Z5 321 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
USP16-206ENST00000485067 MBIPQ9NS73 344 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 SEC24BO95487 1268 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 SEMA3FQ13275 785 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 TBC1D32Q96NH3 1257 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 KIF24Q5T7B8 1368 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 FMN2Q9NZ56 1722 aa11.38□□□□□ -0.59
USP16-206ENST00000485067 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
USP16-206ENST00000485067 MTMR7Q9Y216 660 aa11.37□□□□□ -0.59
USP16-206ENST00000485067 MAP3K19Q56UN5 1328 aa11.37□□□□□ -0.59
USP16-206ENST00000485067 NUCB1Q02818 461 aa11.37□□□□□ -0.59
USP16-206ENST00000485067 TWISTNBQ3B726 338 aaPredicted RBP11.37□□□□□ -0.59
USP16-206ENST00000485067 EXOC8Q8IYI6 725 aa11.37□□□□□ -0.59
USP16-206ENST00000485067 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
USP16-206ENST00000485067 PIK3C2AO00443 1686 aa11.36□□□□□ -0.59
USP16-206ENST00000485067 ABCC4O15439 1325 aa11.36□□□□□ -0.59
USP16-206ENST00000485067 NFKBIBQ15653 356 aa11.36□□□□□ -0.59
USP16-206ENST00000485067 GCC1Q96CN9 775 aa11.36□□□□□ -0.59
USP16-206ENST00000485067 ZBTB7BO15156 539 aaPredicted RBP11.35□□□□□ -0.59
USP16-206ENST00000485067 FOXO3O43524 673 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 TPM2P07951 284 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 SLC20A2Q08357 652 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 DMTNQ08495 405 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 KRT24Q2M2I5 525 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 HSP90AB3PQ58FF7 597 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 MAP7D2Q96T17 732 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 YY1AP1Q9H869 796 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 IRF6O14896 467 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
USP16-206ENST00000485067 FOXD4L4Q8WXT5 416 aaPredicted RBP11.35□□□□□ -0.59
USP16-206ENST00000485067 ADAMTSL3P82987 1691 aa11.35□□□□□ -0.59
USP16-206ENST00000485067 ARHGEF10O15013 1369 aa11.34□□□□□ -0.59
USP16-206ENST00000485067 KIF20AO95235 890 aa11.34□□□□□ -0.59
USP16-206ENST00000485067 MCM10Q7L590 875 aa11.34□□□□□ -0.59
USP16-206ENST00000485067 C8orf58Q8NAV2 365 aa11.34□□□□□ -0.59
USP16-206ENST00000485067 SGSM3Q96HU1 749 aa11.34□□□□□ -0.59
USP16-206ENST00000485067 MARF1Q9Y4F3 1742 aaKnown RBP11.34□□□□□ -0.59
USP16-206ENST00000485067 KIAA0232Q92628 1395 aa11.34□□□□□ -0.59
USP16-206ENST00000485067 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
USP16-206ENST00000485067 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
USP16-206ENST00000485067 GEMIN8Q9NWZ8 242 aaKnown RBP11.34□□□□□ -0.59
USP16-206ENST00000485067 CHD2O14647 1828 aaKnown RBP11.34□□□□□ -0.59
USP16-206ENST00000485067 ANKARQ7Z5J8 1434 aa11.33□□□□□ -0.6
USP16-206ENST00000485067 CASC1Q6TDU7 716 aa11.33□□□□□ -0.6
USP16-206ENST00000485067 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
USP16-206ENST00000485067 NLRP6P59044 892 aa11.33□□□□□ -0.6
USP16-206ENST00000485067 USP54Q70EL1 1684 aa11.33□□□□□ -0.6
USP16-206ENST00000485067 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
USP16-206ENST00000485067 CHL1O00533 1208 aa11.32□□□□□ -0.6
USP16-206ENST00000485067 RRAGDQ9NQL2 400 aaPredicted RBP11.32□□□□□ -0.6
USP16-206ENST00000485067 MIS18AQ9NYP9 233 aa11.32□□□□□ -0.6
USP16-206ENST00000485067 FLT4P35916 1363 aa11.32□□□□□ -0.6
USP16-206ENST00000485067 XPCQ01831 940 aaPredicted RBP11.32□□□□□ -0.6
USP16-206ENST00000485067 NBPF9Q3BBW0 867 aa11.32□□□□□ -0.6
USP16-206ENST00000485067 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
USP16-206ENST00000485067 MPNDQ8N594 471 aa11.31□□□□□ -0.6
USP16-206ENST00000485067 C22orf23Q9BZE7 217 aa11.31□□□□□ -0.6
USP16-206ENST00000485067 ZNF142P52746 1687 aaPredicted RBP11.31□□□□□ -0.6
USP16-206ENST00000485067 BMP2KLQ5H9B9 411 aa11.3□□□□□ -0.6
USP16-206ENST00000485067 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
USP16-206ENST00000485067 EYA1Q99502 592 aa11.3□□□□□ -0.6
USP16-206ENST00000485067 SETD1BQ9UPS6 1966 aaKnown RBP11.3□□□□□ -0.6
USP16-206ENST00000485067 AMPHP49418 695 aa11.3□□□□□ -0.6
USP16-206ENST00000485067 INTS3Q68E01 1043 aaKnown RBP11.3□□□□□ -0.6
USP16-206ENST00000485067 TSHZ1Q6ZSZ6 1077 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms