RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SIK1P57059 783 aa21.63■■□□□ 1.05
DDR1-246ENST00000485023 RBM42Q9BTD8 480 aaKnown RBP21.63■■□□□ 1.05
DDR1-246ENST00000485023 ZBTB7AO95365 584 aa21.62■■□□□ 1.05
DDR1-246ENST00000485023 TFCP2L1Q9NZI6 479 aa21.62■■□□□ 1.05
DDR1-246ENST00000485023 MRC1P22897 1456 aa21.61■■□□□ 1.05
DDR1-246ENST00000485023 GNAT3A8MTJ3 354 aa21.61■■□□□ 1.05
DDR1-246ENST00000485023 SLC52A2Q9HAB3 445 aa21.61■■□□□ 1.05
DDR1-246ENST00000485023 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
DDR1-246ENST00000485023 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
DDR1-246ENST00000485023 TUBGCP6Q96RT7 1819 aa21.6■■□□□ 1.05
DDR1-246ENST00000485023 ATP6V1AP38606 617 aa21.6■■□□□ 1.05
DDR1-246ENST00000485023 PTCD1O75127 700 aaKnown RBP21.59■■□□□ 1.05
DDR1-246ENST00000485023 C4BP0C0L5 1744 aa21.59■■□□□ 1.05
DDR1-246ENST00000485023 ITPK1Q13572 414 aa21.59■■□□□ 1.05
DDR1-246ENST00000485023 LINC00116Q8NCU8 138 aa21.59■■□□□ 1.05
DDR1-246ENST00000485023 TAF1LQ8IZX4 1826 aa21.59■■□□□ 1.05
DDR1-246ENST00000485023 PNPLA7Q6ZV29 1317 aa21.58■■□□□ 1.05
DDR1-246ENST00000485023 ATF5Q9Y2D1 282 aaPredicted RBP21.58■■□□□ 1.05
DDR1-246ENST00000485023 NEFMP07197 916 aa21.57■■□□□ 1.04
DDR1-246ENST00000485023 SLC39A6Q13433 755 aa21.57■■□□□ 1.04
DDR1-246ENST00000485023 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
DDR1-246ENST00000485023 AK7Q96M32 723 aa21.57■■□□□ 1.04
DDR1-246ENST00000485023 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
DDR1-246ENST00000485023 SPON1Q9HCB6 807 aa21.57■■□□□ 1.04
DDR1-246ENST00000485023 MSH5O43196 834 aa21.56■■□□□ 1.04
DDR1-246ENST00000485023 SMIM5Q71RC9 77 aa21.56■■□□□ 1.04
DDR1-246ENST00000485023 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
DDR1-246ENST00000485023 TEFQ10587 303 aa21.55■■□□□ 1.04
DDR1-246ENST00000485023 QSER1Q2KHR3 1735 aa21.55■■□□□ 1.04
DDR1-246ENST00000485023 PHF14O94880 888 aa21.54■■□□□ 1.04
DDR1-246ENST00000485023 DCTN1Q14203 1278 aa21.54■■□□□ 1.04
DDR1-246ENST00000485023 WDR43Q15061 677 aaKnown RBP eCLIP21.54■■□□□ 1.04
DDR1-246ENST00000485023 MCM10Q7L590 875 aa21.54■■□□□ 1.04
DDR1-246ENST00000485023 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
DDR1-246ENST00000485023 PLEKHF1Q96S99 279 aa21.54■■□□□ 1.04
DDR1-246ENST00000485023 AMIGO3Q86WK7 504 aa21.53■■□□□ 1.04
DDR1-246ENST00000485023 GNPATO15228 680 aa21.52■■□□□ 1.04
DDR1-246ENST00000485023 COL23A1Q86Y22 540 aaPredicted RBP21.52■■□□□ 1.04
DDR1-246ENST00000485023 CCDC146Q8IYE0 955 aa21.52■■□□□ 1.04
DDR1-246ENST00000485023 MTFR1LQ9H019 292 aa21.52■■□□□ 1.04
DDR1-246ENST00000485023 PPP1R1BQ9UD71 204 aaPredicted RBP21.52■■□□□ 1.04
DDR1-246ENST00000485023 CEMIPQ8WUJ3 1361 aa21.51■■□□□ 1.03
DDR1-246ENST00000485023 KCPQ6ZWJ8 1503 aa21.51■■□□□ 1.03
DDR1-246ENST00000485023 TJP1Q07157 1748 aa21.51■■□□□ 1.03
DDR1-246ENST00000485023 PNNQ9H307 717 aaKnown RBP21.5■■□□□ 1.03
DDR1-246ENST00000485023 ZNF831Q5JPB2 1677 aa21.5■■□□□ 1.03
DDR1-246ENST00000485023 COL5A3P25940 1745 aaPredicted RBP21.49■■□□□ 1.03
DDR1-246ENST00000485023 SIPA1L3O60292 1781 aaPredicted RBP21.49■■□□□ 1.03
DDR1-246ENST00000485023 ANP32CO43423 234 aa21.49■■□□□ 1.03
DDR1-246ENST00000485023 NFE2L2Q16236 605 aa21.49■■□□□ 1.03
DDR1-246ENST00000485023 TTC5Q8N0Z6 440 aa21.49■■□□□ 1.03
DDR1-246ENST00000485023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.48■■□□□ 1.03
DDR1-246ENST00000485023 HMGB2P26583 209 aaKnown RBP21.48■■□□□ 1.03
DDR1-246ENST00000485023 PTGER2P43116 358 aa21.48■■□□□ 1.03
DDR1-246ENST00000485023 MSL1Q68DK7 614 aa21.48■■□□□ 1.03
DDR1-246ENST00000485023 UBR3Q6ZT12 1888 aa21.47■■□□□ 1.03
DDR1-246ENST00000485023 CCDC184Q52MB2 194 aa21.47■■□□□ 1.03
DDR1-246ENST00000485023 DNAJC10Q8IXB1 793 aa21.47■■□□□ 1.03
DDR1-246ENST00000485023 ADAMTS8Q9UP79 889 aa21.47■■□□□ 1.03
DDR1-246ENST00000485023 BTBD11A6QL63 1104 aa21.46■■□□□ 1.03
DDR1-246ENST00000485023 THUMPD2Q9BTF0 503 aaKnown RBP21.46■■□□□ 1.03
DDR1-246ENST00000485023 RRP7AQ9Y3A4 280 aaKnown RBP21.46■■□□□ 1.03
DDR1-246ENST00000485023 DLG5Q8TDM6 1919 aa21.46■■□□□ 1.03
DDR1-246ENST00000485023 UBR2Q8IWV8 1755 aa21.46■■□□□ 1.03
DDR1-246ENST00000485023 KCNQ3O43525 872 aa21.45■■□□□ 1.02
DDR1-246ENST00000485023 ZNF790Q6PG37 636 aa21.45■■□□□ 1.02
DDR1-246ENST00000485023 SLC16A10Q8TF71 515 aa21.45■■□□□ 1.02
DDR1-246ENST00000485023 CNTNAP4Q9C0A0 1308 aa21.45■■□□□ 1.02
DDR1-246ENST00000485023 CICQ96RK0 1608 aaPredicted RBP21.44■■□□□ 1.02
DDR1-246ENST00000485023 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
DDR1-246ENST00000485023 SSFA2P28290 1259 aa21.44■■□□□ 1.02
DDR1-246ENST00000485023 CRKLP46109 303 aaKnown RBP21.44■■□□□ 1.02
DDR1-246ENST00000485023 FLAD1Q8NFF5 587 aa21.44■■□□□ 1.02
DDR1-246ENST00000485023 NEUROD2Q15784 382 aa21.43■■□□□ 1.02
DDR1-246ENST00000485023 ZNF496Q96IT1 587 aaPredicted RBP21.43■■□□□ 1.02
DDR1-246ENST00000485023 SGIP1Q9BQI5 828 aa21.43■■□□□ 1.02
DDR1-246ENST00000485023 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
DDR1-246ENST00000485023 RIPK4P57078 832 aa21.42■■□□□ 1.02
DDR1-246ENST00000485023 MIS18AQ9NYP9 233 aa21.42■■□□□ 1.02
DDR1-246ENST00000485023 POLD1P28340 1107 aa21.41■■□□□ 1.02
DDR1-246ENST00000485023 TMPOP42166 694 aaKnown RBP21.41■■□□□ 1.02
DDR1-246ENST00000485023 KLHL34Q8N239 644 aa21.41■■□□□ 1.02
DDR1-246ENST00000485023 RUNDC1Q96C34 613 aa21.41■■□□□ 1.02
DDR1-246ENST00000485023 HEG1Q9ULI3 1381 aa21.4■■□□□ 1.02
DDR1-246ENST00000485023 RC3H1Q5TC82 1133 aaKnown RBP21.4■■□□□ 1.02
DDR1-246ENST00000485023 FMNL2Q96PY5 1086 aa21.4■■□□□ 1.02
DDR1-246ENST00000485023 ARXQ96QS3 562 aa21.4■■□□□ 1.02
DDR1-246ENST00000485023 MRS2Q9HD23 443 aa21.4■■□□□ 1.02
DDR1-246ENST00000485023 RPS6KA4O75676 772 aa21.39■■□□□ 1.01
DDR1-246ENST00000485023 CYP19A1P11511 503 aaPredicted RBP21.39■■□□□ 1.01
DDR1-246ENST00000485023 TRAPPC3LQ5T215 181 aa21.39■■□□□ 1.01
DDR1-246ENST00000485023 INTS5Q6P9B9 1019 aaKnown RBP21.39■■□□□ 1.01
DDR1-246ENST00000485023 CCDC87Q9NVE4 849 aa21.39■■□□□ 1.01
DDR1-246ENST00000485023 MYH14Q7Z406 1995 aaKnown RBP21.38■■□□□ 1.01
DDR1-246ENST00000485023 TAF7Q15545 349 aaPredicted RBP21.38■■□□□ 1.01
DDR1-246ENST00000485023 VSIG10Q8N0Z9 540 aa21.38■■□□□ 1.01
DDR1-246ENST00000485023 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
DDR1-246ENST00000485023 FHDC1Q9C0D6 1143 aaPredicted RBP21.37■■□□□ 1.01
DDR1-246ENST00000485023 ZBTB1Q9Y2K1 713 aa21.37■■□□□ 1.01
DDR1-246ENST00000485023 C4AP0C0L4 1744 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms