RNA–Protein interactions for RNA: ENST00000484809.1

SNX5-212, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 1,321 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-212ENST00000484809 MTFR1LQ9H019 292 aa18.55■□□□□ 0.56
SNX5-212ENST00000484809 TFCP2L1Q9NZI6 479 aa18.55■□□□□ 0.56
SNX5-212ENST00000484809 PNPLA7Q6ZV29 1317 aa18.55■□□□□ 0.56
SNX5-212ENST00000484809 UBR3Q6ZT12 1888 aa18.54■□□□□ 0.56
SNX5-212ENST00000484809 U2SURPO15042 1029 aaKnown RBP18.54■□□□□ 0.56
SNX5-212ENST00000484809 PTGER2P43116 358 aa18.54■□□□□ 0.56
SNX5-212ENST00000484809 ATG3Q9NT62 314 aa18.54■□□□□ 0.56
SNX5-212ENST00000484809 ATF5Q9Y2D1 282 aaPredicted RBP18.54■□□□□ 0.56
SNX5-212ENST00000484809 ZNF831Q5JPB2 1677 aa18.54■□□□□ 0.56
SNX5-212ENST00000484809 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
SNX5-212ENST00000484809 SIK1P57059 783 aa18.53■□□□□ 0.56
SNX5-212ENST00000484809 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
SNX5-212ENST00000484809 ADAMTS7Q9UKP4 1686 aa18.53■□□□□ 0.56
SNX5-212ENST00000484809 CABP4P57796 275 aa18.52■□□□□ 0.56
SNX5-212ENST00000484809 SLC16A10Q8TF71 515 aa18.52■□□□□ 0.56
SNX5-212ENST00000484809 PPP1R1BQ9UD71 204 aaPredicted RBP18.52■□□□□ 0.56
SNX5-212ENST00000484809 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
SNX5-212ENST00000484809 SGIP1Q9BQI5 828 aa18.51■□□□□ 0.55
SNX5-212ENST00000484809 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
SNX5-212ENST00000484809 NUDCQ9Y266 331 aa18.49■□□□□ 0.55
SNX5-212ENST00000484809 COL5A3P25940 1745 aaPredicted RBP18.49■□□□□ 0.55
SNX5-212ENST00000484809 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
SNX5-212ENST00000484809 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
SNX5-212ENST00000484809 ITPK1Q13572 414 aa18.49■□□□□ 0.55
SNX5-212ENST00000484809 COL23A1Q86Y22 540 aaPredicted RBP18.49■□□□□ 0.55
SNX5-212ENST00000484809 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
SNX5-212ENST00000484809 MYH14Q7Z406 1995 aaKnown RBP18.48■□□□□ 0.55
SNX5-212ENST00000484809 RNMTO43148 476 aaKnown RBP18.48■□□□□ 0.55
SNX5-212ENST00000484809 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
SNX5-212ENST00000484809 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
SNX5-212ENST00000484809 SLC4A9Q96Q91 983 aa18.48■□□□□ 0.55
SNX5-212ENST00000484809 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
SNX5-212ENST00000484809 MRC1P22897 1456 aa18.47■□□□□ 0.55
SNX5-212ENST00000484809 SLC52A2Q9HAB3 445 aa18.47■□□□□ 0.55
SNX5-212ENST00000484809 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
SNX5-212ENST00000484809 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
SNX5-212ENST00000484809 AK7Q96M32 723 aa18.46■□□□□ 0.55
SNX5-212ENST00000484809 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
SNX5-212ENST00000484809 CICQ96RK0 1608 aaPredicted RBP18.45■□□□□ 0.54
SNX5-212ENST00000484809 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
SNX5-212ENST00000484809 U2AF1L5P0DN76 240 aaPredicted RBP18.45■□□□□ 0.54
SNX5-212ENST00000484809 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
SNX5-212ENST00000484809 U2AF1Q01081 240 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNX5-212ENST00000484809 AMIGO3Q86WK7 504 aa18.45■□□□□ 0.54
SNX5-212ENST00000484809 FCHSD2O94868 740 aa18.44■□□□□ 0.54
SNX5-212ENST00000484809 PHACTR3Q96KR7 559 aa18.44■□□□□ 0.54
SNX5-212ENST00000484809 TJP1Q07157 1748 aa18.44■□□□□ 0.54
SNX5-212ENST00000484809 MAP3K5Q99683 1374 aa18.43■□□□□ 0.54
SNX5-212ENST00000484809 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
SNX5-212ENST00000484809 RALBP1Q15311 655 aa18.43■□□□□ 0.54
SNX5-212ENST00000484809 ARXQ96QS3 562 aa18.43■□□□□ 0.54
SNX5-212ENST00000484809 UBR2Q8IWV8 1755 aa18.42■□□□□ 0.54
SNX5-212ENST00000484809 DLG5Q8TDM6 1919 aa18.42■□□□□ 0.54
SNX5-212ENST00000484809 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
SNX5-212ENST00000484809 SSFA2P28290 1259 aa18.42■□□□□ 0.54
SNX5-212ENST00000484809 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
SNX5-212ENST00000484809 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
SNX5-212ENST00000484809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.41■□□□□ 0.54
SNX5-212ENST00000484809 GNPATO15228 680 aa18.41■□□□□ 0.54
SNX5-212ENST00000484809 POLD1P28340 1107 aa18.41■□□□□ 0.54
SNX5-212ENST00000484809 RC3H1Q5TC82 1133 aaKnown RBP18.41■□□□□ 0.54
SNX5-212ENST00000484809 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
SNX5-212ENST00000484809 IL17REQ8NFR9 667 aa18.41■□□□□ 0.54
SNX5-212ENST00000484809 FHDC1Q9C0D6 1143 aaPredicted RBP18.41■□□□□ 0.54
SNX5-212ENST00000484809 PHF14O94880 888 aa18.4■□□□□ 0.54
SNX5-212ENST00000484809 SYT17Q9BSW7 474 aa18.4■□□□□ 0.54
SNX5-212ENST00000484809 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
SNX5-212ENST00000484809 CNTNAP4Q9C0A0 1308 aa18.39■□□□□ 0.53
SNX5-212ENST00000484809 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
SNX5-212ENST00000484809 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
SNX5-212ENST00000484809 CEMIPQ8WUJ3 1361 aa18.37■□□□□ 0.53
SNX5-212ENST00000484809 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
SNX5-212ENST00000484809 MSL1Q68DK7 614 aa18.37■□□□□ 0.53
SNX5-212ENST00000484809 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
SNX5-212ENST00000484809 RPS6KA4O75676 772 aa18.36■□□□□ 0.53
SNX5-212ENST00000484809 TEFQ10587 303 aa18.36■□□□□ 0.53
SNX5-212ENST00000484809 CRKLP46109 303 aaKnown RBP18.35■□□□□ 0.53
SNX5-212ENST00000484809 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
SNX5-212ENST00000484809 TRAPPC3LQ5T215 181 aa18.34■□□□□ 0.53
SNX5-212ENST00000484809 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.53
SNX5-212ENST00000484809 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.53
SNX5-212ENST00000484809 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
SNX5-212ENST00000484809 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
SNX5-212ENST00000484809 ARHGEF1Q92888 912 aaKnown RBP18.32■□□□□ 0.52
SNX5-212ENST00000484809 NEFMP07197 916 aa18.31■□□□□ 0.52
SNX5-212ENST00000484809 INTS5Q6P9B9 1019 aaKnown RBP18.31■□□□□ 0.52
SNX5-212ENST00000484809 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
SNX5-212ENST00000484809 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
SNX5-212ENST00000484809 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
SNX5-212ENST00000484809 CYP19A1P11511 503 aaPredicted RBP18.3■□□□□ 0.52
SNX5-212ENST00000484809 MCM10Q7L590 875 aa18.3■□□□□ 0.52
SNX5-212ENST00000484809 KLHL34Q8N239 644 aa18.3■□□□□ 0.52
SNX5-212ENST00000484809 PNNQ9H307 717 aaKnown RBP18.3■□□□□ 0.52
SNX5-212ENST00000484809 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
SNX5-212ENST00000484809 ZNF496Q96IT1 587 aaPredicted RBP18.29■□□□□ 0.52
SNX5-212ENST00000484809 CCDC87Q9NVE4 849 aa18.29■□□□□ 0.52
SNX5-212ENST00000484809 CHD4Q14839 1912 aa18.29■□□□□ 0.52
SNX5-212ENST00000484809 BTBD11A6QL63 1104 aa18.28■□□□□ 0.52
SNX5-212ENST00000484809 RFC4P35249 363 aa18.28■□□□□ 0.52
SNX5-212ENST00000484809 DCTN1Q14203 1278 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms