RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 MRC1P22897 1456 aa14.97□□□□□ -0.01
RFTN1-210ENST00000484752 SEPT12Q8IYM1 358 aa14.97□□□□□ -0.01
RFTN1-210ENST00000484752 TTC5Q8N0Z6 440 aa14.97□□□□□ -0.01
RFTN1-210ENST00000484752 TSR2Q969E8 191 aaKnown RBP14.97□□□□□ -0.01
RFTN1-210ENST00000484752 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
RFTN1-210ENST00000484752 TMOD3Q9NYL9 352 aa14.97□□□□□ -0.01
RFTN1-210ENST00000484752 SHANK3Q9BYB0 1731 aa14.97□□□□□ -0.01
RFTN1-210ENST00000484752 ZNF428Q96B54 188 aa14.96□□□□□ -0.01
RFTN1-210ENST00000484752 SCN11AQ9UI33 1791 aa14.96□□□□□ -0.02
RFTN1-210ENST00000484752 SOS1Q07889 1333 aaPredicted RBP14.95□□□□□ -0.02
RFTN1-210ENST00000484752 MARCH10Q8NA82 808 aaPredicted RBP14.94□□□□□ -0.02
RFTN1-210ENST00000484752 NFATC2IPQ8NCF5 419 aa14.94□□□□□ -0.02
RFTN1-210ENST00000484752 EXOSC9Q06265 439 aaKnown RBP14.93□□□□□ -0.02
RFTN1-210ENST00000484752 SYTL4Q96C24 671 aaPredicted RBP14.93□□□□□ -0.02
RFTN1-210ENST00000484752 RCAN3Q9UKA8 241 aa14.93□□□□□ -0.02
RFTN1-210ENST00000484752 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
RFTN1-210ENST00000484752 BCL9O00512 1426 aa14.92□□□□□ -0.02
RFTN1-210ENST00000484752 HOXB7P09629 217 aa14.91□□□□□ -0.02
RFTN1-210ENST00000484752 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
RFTN1-210ENST00000484752 ZNF790Q6PG37 636 aa14.91□□□□□ -0.02
RFTN1-210ENST00000484752 KRT27Q7Z3Y8 459 aa14.91□□□□□ -0.02
RFTN1-210ENST00000484752 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.9□□□□□ -0.02
RFTN1-210ENST00000484752 FMNL2Q96PY5 1086 aa14.9□□□□□ -0.02
RFTN1-210ENST00000484752 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
RFTN1-210ENST00000484752 SIPA1L3O60292 1781 aaPredicted RBP14.89□□□□□ -0.03
RFTN1-210ENST00000484752 PRIM1P49642 420 aaKnown RBP14.89□□□□□ -0.03
RFTN1-210ENST00000484752 EIF4A1P60842 406 aaKnown RBP14.89□□□□□ -0.03
RFTN1-210ENST00000484752 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
RFTN1-210ENST00000484752 KDM3BQ7LBC6 1761 aa14.88□□□□□ -0.03
RFTN1-210ENST00000484752 ALDH1L2Q3SY69 923 aa14.88□□□□□ -0.03
RFTN1-210ENST00000484752 PIGBQ92521 554 aa14.88□□□□□ -0.03
RFTN1-210ENST00000484752 SMARCC1Q92922 1105 aaPredicted RBP14.88□□□□□ -0.03
RFTN1-210ENST00000484752 DOT1LQ8TEK3 1739 aa14.88□□□□□ -0.03
RFTN1-210ENST00000484752 TOGARAM1Q9Y4F4 1720 aa14.87□□□□□ -0.03
RFTN1-210ENST00000484752 NEFLP07196 543 aa14.87□□□□□ -0.03
RFTN1-210ENST00000484752 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
RFTN1-210ENST00000484752 ACSBG1Q96GR2 724 aa14.87□□□□□ -0.03
RFTN1-210ENST00000484752 STK31Q9BXU1 1019 aa14.87□□□□□ -0.03
RFTN1-210ENST00000484752 RGS17Q9UGC6 210 aaPredicted RBP14.87□□□□□ -0.03
RFTN1-210ENST00000484752 RGS12O14924 1447 aa14.86□□□□□ -0.03
RFTN1-210ENST00000484752 ELL2O00472 640 aaPredicted RBP14.86□□□□□ -0.03
RFTN1-210ENST00000484752 SNRPA1P09661 255 aaKnown RBP14.86□□□□□ -0.03
RFTN1-210ENST00000484752 SLC39A6Q13433 755 aa14.86□□□□□ -0.03
RFTN1-210ENST00000484752 CCDC30Q5VVM6 783 aa14.86□□□□□ -0.03
RFTN1-210ENST00000484752 C8orf58Q8NAV2 365 aa14.86□□□□□ -0.03
RFTN1-210ENST00000484752 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
RFTN1-210ENST00000484752 KIF16BQ96L93 1317 aa14.86□□□□□ -0.03
RFTN1-210ENST00000484752 VAMP4O75379 141 aa14.85□□□□□ -0.03
RFTN1-210ENST00000484752 RARSP54136 660 aaKnown RBP14.85□□□□□ -0.03
RFTN1-210ENST00000484752 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
RFTN1-210ENST00000484752 GIGYF1O75420 1035 aaPredicted RBP14.84□□□□□ -0.03
RFTN1-210ENST00000484752 HMGB2P26583 209 aaKnown RBP14.84□□□□□ -0.03
RFTN1-210ENST00000484752 HDGFL1Q5TGJ6 251 aa14.84□□□□□ -0.03
RFTN1-210ENST00000484752 VSIG10Q8N0Z9 540 aa14.84□□□□□ -0.03
RFTN1-210ENST00000484752 TSPYL6Q8N831 410 aa14.84□□□□□ -0.03
RFTN1-210ENST00000484752 TEX13AQ9BXU3 409 aaPredicted RBP14.84□□□□□ -0.03
RFTN1-210ENST00000484752 PAPPAQ13219 1627 aa14.84□□□□□ -0.03
RFTN1-210ENST00000484752 HEG1Q9ULI3 1381 aa14.84□□□□□ -0.03
RFTN1-210ENST00000484752 IPO8O15397 1037 aaKnown RBP14.83□□□□□ -0.04
RFTN1-210ENST00000484752 KCNQ3O43525 872 aa14.83□□□□□ -0.04
RFTN1-210ENST00000484752 ZNF496Q96IT1 587 aaPredicted RBP14.83□□□□□ -0.04
RFTN1-210ENST00000484752 SUPT16HQ9Y5B9 1047 aaKnown RBP14.83□□□□□ -0.04
RFTN1-210ENST00000484752 NHSQ6T4R5 1651 aa14.83□□□□□ -0.04
RFTN1-210ENST00000484752 PTCD1O75127 700 aaKnown RBP14.82□□□□□ -0.04
RFTN1-210ENST00000484752 MS4A1P11836 297 aa14.82□□□□□ -0.04
RFTN1-210ENST00000484752 KRT24Q2M2I5 525 aa14.82□□□□□ -0.04
RFTN1-210ENST00000484752 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
RFTN1-210ENST00000484752 BCL11BQ9C0K0 894 aaPredicted RBP14.82□□□□□ -0.04
RFTN1-210ENST00000484752 ATG3Q9NT62 314 aa14.82□□□□□ -0.04
RFTN1-210ENST00000484752 ITGB4P16144 1822 aa14.82□□□□□ -0.04
RFTN1-210ENST00000484752 PALLDQ8WX93 1383 aa14.82□□□□□ -0.04
RFTN1-210ENST00000484752 EIF2S2P20042 333 aaKnown RBP14.81□□□□□ -0.04
RFTN1-210ENST00000484752 RRP1P56182 461 aaKnown RBP14.81□□□□□ -0.04
RFTN1-210ENST00000484752 SSH1Q8WYL5 1049 aa14.81□□□□□ -0.04
RFTN1-210ENST00000484752 ASAP1Q9ULH1 1129 aa14.81□□□□□ -0.04
RFTN1-210ENST00000484752 KCPQ6ZWJ8 1503 aa14.81□□□□□ -0.04
RFTN1-210ENST00000484752 KCNQ2O43526 872 aa14.8□□□□□ -0.04
RFTN1-210ENST00000484752 STARD3NLO95772 234 aa14.8□□□□□ -0.04
RFTN1-210ENST00000484752 BRPF1P55201 1214 aaPredicted RBP14.8□□□□□ -0.04
RFTN1-210ENST00000484752 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
RFTN1-210ENST00000484752 FRAT1Q92837 279 aaPredicted RBP14.8□□□□□ -0.04
RFTN1-210ENST00000484752 BCL2L13Q9BXK5 485 aa14.8□□□□□ -0.04
RFTN1-210ENST00000484752 DBF4Q9UBU7 674 aaPredicted RBP14.8□□□□□ -0.04
RFTN1-210ENST00000484752 ERBB4Q15303 1308 aa14.8□□□□□ -0.04
RFTN1-210ENST00000484752 UBR2Q8IWV8 1755 aa14.8□□□□□ -0.04
RFTN1-210ENST00000484752 BCAR3O75815 825 aa14.79□□□□□ -0.04
RFTN1-210ENST00000484752 ZKSCAN2Q63HK3 967 aa14.79□□□□□ -0.04
RFTN1-210ENST00000484752 BRWD3Q6RI45 1802 aa14.79□□□□□ -0.04
RFTN1-210ENST00000484752 PTPRCP08575 1304 aa14.78□□□□□ -0.04
RFTN1-210ENST00000484752 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
RFTN1-210ENST00000484752 NPM2Q86SE8 214 aaKnown RBP14.78□□□□□ -0.04
RFTN1-210ENST00000484752 KAT6BQ8WYB5 2073 aa14.77□□□□□ -0.04
RFTN1-210ENST00000484752 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.04
RFTN1-210ENST00000484752 LOC102724428A0A0B4J2F2 783 aa14.77□□□□□ -0.05
RFTN1-210ENST00000484752 ATP6V1AP38606 617 aa14.77□□□□□ -0.05
RFTN1-210ENST00000484752 SIK1P57059 783 aa14.77□□□□□ -0.05
RFTN1-210ENST00000484752 FTSJ3Q8IY81 847 aaKnown RBP14.77□□□□□ -0.05
RFTN1-210ENST00000484752 MRPL50Q8N5N7 158 aaKnown RBP14.77□□□□□ -0.05
RFTN1-210ENST00000484752 ARHGAP45Q92619 1136 aa14.77□□□□□ -0.05
RFTN1-210ENST00000484752 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms