RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 CDCA7LQ96GN5 454 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 CDCA7Q9BWT1 371 aaPredicted RBP7.02□□□□□ -1.29
CNTN4-216ENST00000484686 RGPD1P0DJD0 1748 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 FAM208AQ9UK61 1670 aaKnown RBP7.01□□□□□ -1.29
CNTN4-216ENST00000484686 ABCC6O95255 1503 aa7.01□□□□□ -1.29
CNTN4-216ENST00000484686 TRIM37O94972 964 aa7.01□□□□□ -1.29
CNTN4-216ENST00000484686 C1QBPQ07021 282 aaKnown RBP7.01□□□□□ -1.29
CNTN4-216ENST00000484686 SLC39A6Q13433 755 aa7.01□□□□□ -1.29
CNTN4-216ENST00000484686 AKAP4Q5JQC9 854 aa7.01□□□□□ -1.29
CNTN4-216ENST00000484686 WWC1Q8IX03 1113 aa7.01□□□□□ -1.29
CNTN4-216ENST00000484686 DISP2A7MBM2 1401 aa7.01□□□□□ -1.29
CNTN4-216ENST00000484686 KCNQ4P56696 695 aa7.01□□□□□ -1.29
CNTN4-216ENST00000484686 ERICH6BQ5W0A0 696 aa7.01□□□□□ -1.29
CNTN4-216ENST00000484686 SPINK5Q9NQ38 1064 aaPredicted RBP7.01□□□□□ -1.29
CNTN4-216ENST00000484686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.01□□□□□ -1.29
CNTN4-216ENST00000484686 RGS12O14924 1447 aa7□□□□□ -1.29
CNTN4-216ENST00000484686 ELL2O00472 640 aaPredicted RBP7□□□□□ -1.29
CNTN4-216ENST00000484686 CABP4P57796 275 aa7□□□□□ -1.29
CNTN4-216ENST00000484686 TEFQ10587 303 aa7□□□□□ -1.29
CNTN4-216ENST00000484686 ILDR2Q71H61 639 aa7□□□□□ -1.29
CNTN4-216ENST00000484686 RNMTO43148 476 aaKnown RBP7□□□□□ -1.29
CNTN4-216ENST00000484686 PTCD1O75127 700 aaKnown RBP7□□□□□ -1.29
CNTN4-216ENST00000484686 TSR2Q969E8 191 aaKnown RBP7□□□□□ -1.29
CNTN4-216ENST00000484686 DCAF5Q96JK2 942 aa7□□□□□ -1.29
CNTN4-216ENST00000484686 MAP3K5Q99683 1374 aa7□□□□□ -1.29
CNTN4-216ENST00000484686 NCAPD2Q15021 1401 aa7□□□□□ -1.29
CNTN4-216ENST00000484686 KCNQ3O43525 872 aa6.99□□□□□ -1.29
CNTN4-216ENST00000484686 ASAP1Q9ULH1 1129 aa6.99□□□□□ -1.29
CNTN4-216ENST00000484686 KRT24Q2M2I5 525 aa6.99□□□□□ -1.29
CNTN4-216ENST00000484686 PIGBQ92521 554 aa6.99□□□□□ -1.29
CNTN4-216ENST00000484686 TMOD3Q9NYL9 352 aa6.99□□□□□ -1.29
CNTN4-216ENST00000484686 TNS2Q63HR2 1409 aa6.99□□□□□ -1.29
CNTN4-216ENST00000484686 BTBD11A6QL63 1104 aa6.98□□□□□ -1.29
CNTN4-216ENST00000484686 SAMD1Q6SPF0 538 aaPredicted RBP6.98□□□□□ -1.29
CNTN4-216ENST00000484686 KDM6AO15550 1401 aaPredicted RBP6.98□□□□□ -1.29
CNTN4-216ENST00000484686 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.98□□□□□ -1.29
CNTN4-216ENST00000484686 SLC52A2Q9HAB3 445 aa6.98□□□□□ -1.29
CNTN4-216ENST00000484686 HSP90AB1P08238 724 aaKnown RBP6.97□□□□□ -1.29
CNTN4-216ENST00000484686 FAM196AQ6ZSG2 479 aa6.97□□□□□ -1.29
CNTN4-216ENST00000484686 NECTIN2Q92692 538 aa6.97□□□□□ -1.29
CNTN4-216ENST00000484686 RBM42Q9BTD8 480 aaKnown RBP6.97□□□□□ -1.29
CNTN4-216ENST00000484686 LMOD3Q0VAK6 560 aa6.97□□□□□ -1.29
CNTN4-216ENST00000484686 TSPYL4Q9UJ04 414 aa6.97□□□□□ -1.29
CNTN4-216ENST00000484686 LRRC37A3O60309 1634 aa6.97□□□□□ -1.29
CNTN4-216ENST00000484686 PRAMEF22A3QJZ6 481 aa6.97□□□□□ -1.29
CNTN4-216ENST00000484686 TCERG1O14776 1098 aaKnown RBP6.97□□□□□ -1.29
CNTN4-216ENST00000484686 APBA3O96018 575 aa6.97□□□□□ -1.29
CNTN4-216ENST00000484686 GOLGA2Q08379 1002 aa6.97□□□□□ -1.29
CNTN4-216ENST00000484686 NKX1-1Q15270 411 aaPredicted RBP6.97□□□□□ -1.29
CNTN4-216ENST00000484686 TAF7Q15545 349 aaPredicted RBP6.97□□□□□ -1.29
CNTN4-216ENST00000484686 MBIPQ9NS73 344 aa6.96□□□□□ -1.29
CNTN4-216ENST00000484686 BRWD3Q6RI45 1802 aa6.96□□□□□ -1.3
CNTN4-216ENST00000484686 DEFB132Q7Z7B7 95 aa6.96□□□□□ -1.3
CNTN4-216ENST00000484686 TTC5Q8N0Z6 440 aa6.96□□□□□ -1.3
CNTN4-216ENST00000484686 VSIG10Q8N0Z9 540 aa6.96□□□□□ -1.3
CNTN4-216ENST00000484686 TAOK2Q9UL54 1235 aa6.96□□□□□ -1.3
CNTN4-216ENST00000484686 PARP4Q9UKK3 1724 aaKnown RBP6.96□□□□□ -1.3
CNTN4-216ENST00000484686 ERVV-2B6SEH9 535 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 PIP4K2AP48426 406 aaPredicted RBP6.95□□□□□ -1.3
CNTN4-216ENST00000484686 ZNF790Q6PG37 636 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 ZNF496Q96IT1 587 aaPredicted RBP6.95□□□□□ -1.3
CNTN4-216ENST00000484686 ATG3Q9NT62 314 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 CEMIPQ8WUJ3 1361 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 DLG5Q8TDM6 1919 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 THSD7AQ9UPZ6 1657 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 HTATSF1O43719 755 aaKnown RBP6.95□□□□□ -1.3
CNTN4-216ENST00000484686 IRX6P78412 446 aaPredicted RBP6.95□□□□□ -1.3
CNTN4-216ENST00000484686 CFAP44Q96MT7 982 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 EIF2S2P20042 333 aaKnown RBP6.95□□□□□ -1.3
CNTN4-216ENST00000484686 EN1Q05925 392 aaPredicted RBP6.95□□□□□ -1.3
CNTN4-216ENST00000484686 CCDC27Q2M243 656 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 SMIM5Q71RC9 77 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
CNTN4-216ENST00000484686 ZNF330Q9Y3S2 320 aaPredicted RBP6.95□□□□□ -1.3
CNTN4-216ENST00000484686 ZBED9Q6R2W3 1325 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 ZNF521Q96K83 1311 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 SHANK3Q9BYB0 1731 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 C8orf58Q8NAV2 365 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 FANCIQ9NVI1 1328 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 CHL1O00533 1208 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 GNAI1P63096 354 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 EXOSC9Q06265 439 aaKnown RBP6.94□□□□□ -1.3
CNTN4-216ENST00000484686 WDR63Q8IWG1 891 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 PKD1L3Q7Z443 1732 aa6.94□□□□□ -1.3
CNTN4-216ENST00000484686 BRD2P25440 801 aaKnown RBP6.93□□□□□ -1.3
CNTN4-216ENST00000484686 ATP6V1AP38606 617 aa6.93□□□□□ -1.3
CNTN4-216ENST00000484686 SLFN5Q08AF3 891 aa6.93□□□□□ -1.3
CNTN4-216ENST00000484686 SF3B2Q13435 895 aaKnown RBP6.93□□□□□ -1.3
CNTN4-216ENST00000484686 NGEFQ8N5V2 710 aa6.93□□□□□ -1.3
CNTN4-216ENST00000484686 SLC4A9Q96Q91 983 aa6.93□□□□□ -1.3
CNTN4-216ENST00000484686 BCL9O00512 1426 aa6.93□□□□□ -1.3
CNTN4-216ENST00000484686 CALD1Q05682 793 aaKnown RBP6.93□□□□□ -1.3
CNTN4-216ENST00000484686 IFT57Q9NWB7 429 aa6.93□□□□□ -1.3
CNTN4-216ENST00000484686 USP16Q9Y5T5 823 aa6.93□□□□□ -1.3
CNTN4-216ENST00000484686 LOC102724428A0A0B4J2F2 783 aa6.92□□□□□ -1.3
CNTN4-216ENST00000484686 E9PSI1 815 aa6.92□□□□□ -1.3
CNTN4-216ENST00000484686 ANXA1P04083 346 aa6.92□□□□□ -1.3
CNTN4-216ENST00000484686 SIK1P57059 783 aa6.92□□□□□ -1.3
CNTN4-216ENST00000484686 EZH2Q15910 746 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms