RNA–Protein interactions for RNA: ENST00000484068.5

PHC3-209, Transcript of polyhomeotic homolog 3, humanhuman

TSL 4

Gene PHC3, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-209ENST00000484068 PAPPAQ13219 1627 aa13.37□□□□□ -0.27
PHC3-209ENST00000484068 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
PHC3-209ENST00000484068 CASZ1Q86V15 1759 aa13.35□□□□□ -0.27
PHC3-209ENST00000484068 LOC102724428A0A0B4J2F2 783 aa13.35□□□□□ -0.27
PHC3-209ENST00000484068 SIK1P57059 783 aa13.35□□□□□ -0.27
PHC3-209ENST00000484068 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
PHC3-209ENST00000484068 MTFR1LQ9H019 292 aa13.35□□□□□ -0.27
PHC3-209ENST00000484068 KDM6AO15550 1401 aaPredicted RBP13.35□□□□□ -0.27
PHC3-209ENST00000484068 PNPLA7Q6ZV29 1317 aa13.35□□□□□ -0.27
PHC3-209ENST00000484068 COL3A1P02461 1466 aaPredicted RBP13.35□□□□□ -0.27
PHC3-209ENST00000484068 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
PHC3-209ENST00000484068 AKAP4Q5JQC9 854 aa13.34□□□□□ -0.27
PHC3-209ENST00000484068 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
PHC3-209ENST00000484068 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
PHC3-209ENST00000484068 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
PHC3-209ENST00000484068 HMGB2P26583 209 aaKnown RBP13.33□□□□□ -0.28
PHC3-209ENST00000484068 PTGER2P43116 358 aa13.33□□□□□ -0.28
PHC3-209ENST00000484068 LGR6Q9HBX8 967 aa13.33□□□□□ -0.28
PHC3-209ENST00000484068 U2AF1L5P0DN76 240 aaPredicted RBP13.32□□□□□ -0.28
PHC3-209ENST00000484068 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
PHC3-209ENST00000484068 U2AF1Q01081 240 aaKnown RBP eCLIP13.32□□□□□ -0.28
PHC3-209ENST00000484068 COL23A1Q86Y22 540 aaPredicted RBP13.32□□□□□ -0.28
PHC3-209ENST00000484068 AK7Q96M32 723 aa13.32□□□□□ -0.28
PHC3-209ENST00000484068 SRCAPQ6ZRS2 3230 aa13.32□□□□□ -0.28
PHC3-209ENST00000484068 PTCD1O75127 700 aaKnown RBP13.31□□□□□ -0.28
PHC3-209ENST00000484068 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
PHC3-209ENST00000484068 ITPK1Q13572 414 aa13.31□□□□□ -0.28
PHC3-209ENST00000484068 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
PHC3-209ENST00000484068 LINC00116Q8NCU8 138 aa13.31□□□□□ -0.28
PHC3-209ENST00000484068 SLC16A10Q8TF71 515 aa13.31□□□□□ -0.28
PHC3-209ENST00000484068 C5P01031 1676 aa13.31□□□□□ -0.28
PHC3-209ENST00000484068 RNMTO43148 476 aaKnown RBP13.3□□□□□ -0.28
PHC3-209ENST00000484068 PHF14O94880 888 aa13.3□□□□□ -0.28
PHC3-209ENST00000484068 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
PHC3-209ENST00000484068 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
PHC3-209ENST00000484068 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
PHC3-209ENST00000484068 SLC4A9Q96Q91 983 aa13.29□□□□□ -0.28
PHC3-209ENST00000484068 ARXQ96QS3 562 aa13.29□□□□□ -0.28
PHC3-209ENST00000484068 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
PHC3-209ENST00000484068 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
PHC3-209ENST00000484068 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
PHC3-209ENST00000484068 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
PHC3-209ENST00000484068 TUBGCP6Q96RT7 1819 aa13.28□□□□□ -0.28
PHC3-209ENST00000484068 GNPATO15228 680 aa13.28□□□□□ -0.28
PHC3-209ENST00000484068 POLD1P28340 1107 aa13.28□□□□□ -0.28
PHC3-209ENST00000484068 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
PHC3-209ENST00000484068 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
PHC3-209ENST00000484068 FLAD1Q8NFF5 587 aa13.28□□□□□ -0.28
PHC3-209ENST00000484068 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
PHC3-209ENST00000484068 C4BP0C0L5 1744 aa13.27□□□□□ -0.28
PHC3-209ENST00000484068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.27□□□□□ -0.29
PHC3-209ENST00000484068 GNAT3A8MTJ3 354 aa13.27□□□□□ -0.29
PHC3-209ENST00000484068 FCHSD2O94868 740 aa13.27□□□□□ -0.29
PHC3-209ENST00000484068 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
PHC3-209ENST00000484068 QSER1Q2KHR3 1735 aa13.27□□□□□ -0.29
PHC3-209ENST00000484068 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.29
PHC3-209ENST00000484068 FKBP8Q14318 412 aa13.26□□□□□ -0.29
PHC3-209ENST00000484068 RALBP1Q15311 655 aa13.26□□□□□ -0.29
PHC3-209ENST00000484068 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
PHC3-209ENST00000484068 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
PHC3-209ENST00000484068 TEFQ10587 303 aa13.25□□□□□ -0.29
PHC3-209ENST00000484068 SYT17Q9BSW7 474 aa13.25□□□□□ -0.29
PHC3-209ENST00000484068 SSFA2P28290 1259 aa13.24□□□□□ -0.29
PHC3-209ENST00000484068 TRAPPC3LQ5T215 181 aa13.24□□□□□ -0.29
PHC3-209ENST00000484068 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
PHC3-209ENST00000484068 RTCBQ9Y3I0 505 aaKnown RBP13.24□□□□□ -0.29
PHC3-209ENST00000484068 NEFMP07197 916 aa13.23□□□□□ -0.29
PHC3-209ENST00000484068 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
PHC3-209ENST00000484068 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
PHC3-209ENST00000484068 DNAJC10Q8IXB1 793 aa13.22□□□□□ -0.29
PHC3-209ENST00000484068 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
PHC3-209ENST00000484068 VIRMAQ69YN4 1812 aaKnown RBP13.22□□□□□ -0.29
PHC3-209ENST00000484068 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.29
PHC3-209ENST00000484068 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
PHC3-209ENST00000484068 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
PHC3-209ENST00000484068 RPS6KA4O75676 772 aa13.21□□□□□ -0.29
PHC3-209ENST00000484068 CRKLP46109 303 aaKnown RBP13.21□□□□□ -0.29
PHC3-209ENST00000484068 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
PHC3-209ENST00000484068 MCM10Q7L590 875 aa13.21□□□□□ -0.29
PHC3-209ENST00000484068 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
PHC3-209ENST00000484068 MRC1P22897 1456 aa13.21□□□□□ -0.3
PHC3-209ENST00000484068 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
PHC3-209ENST00000484068 RFC4P35249 363 aa13.2□□□□□ -0.3
PHC3-209ENST00000484068 ZNF831Q5JPB2 1677 aa13.19□□□□□ -0.3
PHC3-209ENST00000484068 ADAMTS7Q9UKP4 1686 aa13.19□□□□□ -0.3
PHC3-209ENST00000484068 INTS5Q6P9B9 1019 aaKnown RBP13.19□□□□□ -0.3
PHC3-209ENST00000484068 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
PHC3-209ENST00000484068 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
PHC3-209ENST00000484068 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
PHC3-209ENST00000484068 KCNQ3O43525 872 aa13.18□□□□□ -0.3
PHC3-209ENST00000484068 NLGN2Q8NFZ4 835 aa13.18□□□□□ -0.3
PHC3-209ENST00000484068 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
PHC3-209ENST00000484068 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
PHC3-209ENST00000484068 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
PHC3-209ENST00000484068 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
PHC3-209ENST00000484068 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
PHC3-209ENST00000484068 TJP1Q07157 1748 aa13.17□□□□□ -0.3
PHC3-209ENST00000484068 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
PHC3-209ENST00000484068 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
PHC3-209ENST00000484068 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms