RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 SIPA1L3O60292 1781 aaPredicted RBP17.84■□□□□ 0.45
SSR1-208ENST00000483409 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
SSR1-208ENST00000483409 ZNF827Q17R98 1081 aa17.83■□□□□ 0.44
SSR1-208ENST00000483409 GNAT3A8MTJ3 354 aa17.82■□□□□ 0.44
SSR1-208ENST00000483409 C4BP0C0L5 1744 aa17.81■□□□□ 0.44
SSR1-208ENST00000483409 LOC102724428A0A0B4J2F2 783 aa17.81■□□□□ 0.44
SSR1-208ENST00000483409 SIK1P57059 783 aa17.81■□□□□ 0.44
SSR1-208ENST00000483409 SLC52A2Q9HAB3 445 aa17.81■□□□□ 0.44
SSR1-208ENST00000483409 LRP5O75197 1615 aa17.8■□□□□ 0.44
SSR1-208ENST00000483409 NEFMP07197 916 aa17.8■□□□□ 0.44
SSR1-208ENST00000483409 AKT1S1Q96B36 256 aa17.8■□□□□ 0.44
SSR1-208ENST00000483409 PDGFDQ9GZP0 370 aaPredicted RBP17.8■□□□□ 0.44
SSR1-208ENST00000483409 SRCAPQ6ZRS2 3230 aa17.79■□□□□ 0.44
SSR1-208ENST00000483409 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
SSR1-208ENST00000483409 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
SSR1-208ENST00000483409 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
SSR1-208ENST00000483409 ZNF831Q5JPB2 1677 aa17.79■□□□□ 0.44
SSR1-208ENST00000483409 COL5A3P25940 1745 aaPredicted RBP17.78■□□□□ 0.44
SSR1-208ENST00000483409 UBR3Q6ZT12 1888 aa17.78■□□□□ 0.44
SSR1-208ENST00000483409 ANP32CO43423 234 aa17.78■□□□□ 0.44
SSR1-208ENST00000483409 MAPK8IP3Q9UPT6 1336 aa17.77■□□□□ 0.44
SSR1-208ENST00000483409 UBR2Q8IWV8 1755 aa17.77■□□□□ 0.44
SSR1-208ENST00000483409 PTCD1O75127 700 aaKnown RBP17.77■□□□□ 0.44
SSR1-208ENST00000483409 ATP6V1AP38606 617 aa17.77■□□□□ 0.44
SSR1-208ENST00000483409 ITPK1Q13572 414 aa17.77■□□□□ 0.44
SSR1-208ENST00000483409 WDR43Q15061 677 aaKnown RBP eCLIP17.77■□□□□ 0.44
SSR1-208ENST00000483409 PNNQ9H307 717 aaKnown RBP17.77■□□□□ 0.44
SSR1-208ENST00000483409 TFCP2L1Q9NZI6 479 aa17.77■□□□□ 0.44
SSR1-208ENST00000483409 TJP1Q07157 1748 aa17.77■□□□□ 0.44
SSR1-208ENST00000483409 TEFQ10587 303 aa17.76■□□□□ 0.43
SSR1-208ENST00000483409 SLC39A6Q13433 755 aa17.76■□□□□ 0.43
SSR1-208ENST00000483409 LINC00116Q8NCU8 138 aa17.76■□□□□ 0.43
SSR1-208ENST00000483409 RTF1Q92541 710 aaKnown RBP17.76■□□□□ 0.43
SSR1-208ENST00000483409 SLC4A9Q96Q91 983 aa17.76■□□□□ 0.43
SSR1-208ENST00000483409 CEMIPQ8WUJ3 1361 aa17.76■□□□□ 0.43
SSR1-208ENST00000483409 DCTN1Q14203 1278 aa17.75■□□□□ 0.43
SSR1-208ENST00000483409 MCM10Q7L590 875 aa17.75■□□□□ 0.43
SSR1-208ENST00000483409 PNPLA7Q6ZV29 1317 aa17.74■□□□□ 0.43
SSR1-208ENST00000483409 KCPQ6ZWJ8 1503 aa17.74■□□□□ 0.43
SSR1-208ENST00000483409 MYH14Q7Z406 1995 aaKnown RBP17.74■□□□□ 0.43
SSR1-208ENST00000483409 ZBTB7AO95365 584 aa17.74■□□□□ 0.43
SSR1-208ENST00000483409 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
SSR1-208ENST00000483409 CCDC184Q52MB2 194 aa17.74■□□□□ 0.43
SSR1-208ENST00000483409 CCDC146Q8IYE0 955 aa17.74■□□□□ 0.43
SSR1-208ENST00000483409 CICQ96RK0 1608 aaPredicted RBP17.73■□□□□ 0.43
SSR1-208ENST00000483409 AK7Q96M32 723 aa17.73■□□□□ 0.43
SSR1-208ENST00000483409 ADAMTS8Q9UP79 889 aa17.73■□□□□ 0.43
SSR1-208ENST00000483409 HMGB2P26583 209 aaKnown RBP17.72■□□□□ 0.43
SSR1-208ENST00000483409 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
SSR1-208ENST00000483409 SPON1Q9HCB6 807 aa17.71■□□□□ 0.43
SSR1-208ENST00000483409 MSH5O43196 834 aa17.7■□□□□ 0.42
SSR1-208ENST00000483409 SMIM5Q71RC9 77 aa17.7■□□□□ 0.42
SSR1-208ENST00000483409 AMIGO3Q86WK7 504 aa17.7■□□□□ 0.42
SSR1-208ENST00000483409 TTC5Q8N0Z6 440 aa17.7■□□□□ 0.42
SSR1-208ENST00000483409 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
SSR1-208ENST00000483409 BTBD11A6QL63 1104 aa17.69■□□□□ 0.42
SSR1-208ENST00000483409 GNPATO15228 680 aa17.69■□□□□ 0.42
SSR1-208ENST00000483409 PHF14O94880 888 aa17.69■□□□□ 0.42
SSR1-208ENST00000483409 COL23A1Q86Y22 540 aaPredicted RBP17.69■□□□□ 0.42
SSR1-208ENST00000483409 RUNDC1Q96C34 613 aa17.69■□□□□ 0.42
SSR1-208ENST00000483409 RRP7AQ9Y3A4 280 aaKnown RBP17.69■□□□□ 0.42
SSR1-208ENST00000483409 TMPOP42166 694 aaKnown RBP17.68■□□□□ 0.42
SSR1-208ENST00000483409 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
SSR1-208ENST00000483409 DNAJC10Q8IXB1 793 aa17.68■□□□□ 0.42
SSR1-208ENST00000483409 THUMPD2Q9BTF0 503 aaKnown RBP17.68■□□□□ 0.42
SSR1-208ENST00000483409 MTFR1LQ9H019 292 aa17.68■□□□□ 0.42
SSR1-208ENST00000483409 MRS2Q9HD23 443 aa17.68■□□□□ 0.42
SSR1-208ENST00000483409 KDM3BQ7LBC6 1761 aa17.68■□□□□ 0.42
SSR1-208ENST00000483409 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
SSR1-208ENST00000483409 KCNQ3O43525 872 aa17.67■□□□□ 0.42
SSR1-208ENST00000483409 RIPK4P57078 832 aa17.67■□□□□ 0.42
SSR1-208ENST00000483409 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
SSR1-208ENST00000483409 C4AP0C0L4 1744 aa17.67■□□□□ 0.42
SSR1-208ENST00000483409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.66■□□□□ 0.42
SSR1-208ENST00000483409 NEUROD2Q15784 382 aa17.66■□□□□ 0.42
SSR1-208ENST00000483409 FLAD1Q8NFF5 587 aa17.66■□□□□ 0.42
SSR1-208ENST00000483409 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
SSR1-208ENST00000483409 SSFA2P28290 1259 aa17.65■□□□□ 0.42
SSR1-208ENST00000483409 PTGER2P43116 358 aa17.65■□□□□ 0.42
SSR1-208ENST00000483409 CRKLP46109 303 aaKnown RBP17.65■□□□□ 0.42
SSR1-208ENST00000483409 RC3H1Q5TC82 1133 aaKnown RBP17.65■□□□□ 0.42
SSR1-208ENST00000483409 SLC16A10Q8TF71 515 aa17.65■□□□□ 0.42
SSR1-208ENST00000483409 HEG1Q9ULI3 1381 aa17.65■□□□□ 0.42
SSR1-208ENST00000483409 TAF7Q15545 349 aaPredicted RBP17.64■□□□□ 0.41
SSR1-208ENST00000483409 MIS18AQ9NYP9 233 aa17.64■□□□□ 0.41
SSR1-208ENST00000483409 PPP1R1BQ9UD71 204 aaPredicted RBP17.64■□□□□ 0.41
SSR1-208ENST00000483409 RTCBQ9Y3I0 505 aaKnown RBP17.64■□□□□ 0.41
SSR1-208ENST00000483409 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
SSR1-208ENST00000483409 MSL1Q68DK7 614 aa17.63■□□□□ 0.41
SSR1-208ENST00000483409 VSIG10Q8N0Z9 540 aa17.63■□□□□ 0.41
SSR1-208ENST00000483409 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
SSR1-208ENST00000483409 CYP19A1P11511 503 aaPredicted RBP17.62■□□□□ 0.41
SSR1-208ENST00000483409 PNISRQ8TF01 805 aaKnown RBP17.62■□□□□ 0.41
SSR1-208ENST00000483409 SGIP1Q9BQI5 828 aa17.62■□□□□ 0.41
SSR1-208ENST00000483409 APAF1O14727 1248 aa17.61■□□□□ 0.41
SSR1-208ENST00000483409 RPS6KA4O75676 772 aa17.61■□□□□ 0.41
SSR1-208ENST00000483409 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
SSR1-208ENST00000483409 CCDC87Q9NVE4 849 aa17.61■□□□□ 0.41
SSR1-208ENST00000483409 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
SSR1-208ENST00000483409 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms