RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 TOGARAM1Q9Y4F4 1720 aa27.01■■□□□ 1.91
RXRB-204ENST00000483281 CHL1O00533 1208 aa27.01■■□□□ 1.91
RXRB-204ENST00000483281 RGS12O14924 1447 aa27.01■■□□□ 1.91
RXRB-204ENST00000483281 ITGB4P16144 1822 aa27■■□□□ 1.91
RXRB-204ENST00000483281 CABP4P57796 275 aa27■■□□□ 1.91
RXRB-204ENST00000483281 NFATC2IPQ8NCF5 419 aa27■■□□□ 1.91
RXRB-204ENST00000483281 SPINK5Q9NQ38 1064 aaPredicted RBP27■■□□□ 1.91
RXRB-204ENST00000483281 KAT6BQ8WYB5 2073 aa26.99■■□□□ 1.91
RXRB-204ENST00000483281 CDCA7LQ96GN5 454 aa26.98■■□□□ 1.91
RXRB-204ENST00000483281 MYH16Q9H6N6 1097 aa26.98■■□□□ 1.91
RXRB-204ENST00000483281 FAM196AQ6ZSG2 479 aa26.97■■□□□ 1.91
RXRB-204ENST00000483281 DOT1LQ8TEK3 1739 aa26.96■■□□□ 1.91
RXRB-204ENST00000483281 SBF2Q86WG5 1849 aa26.95■■□□□ 1.91
RXRB-204ENST00000483281 TMOD3Q9NYL9 352 aa26.95■■□□□ 1.9
RXRB-204ENST00000483281 BTBD11A6QL63 1104 aa26.94■■□□□ 1.9
RXRB-204ENST00000483281 PRIM1P49642 420 aaKnown RBP26.94■■□□□ 1.9
RXRB-204ENST00000483281 LAS1LQ9Y4W2 734 aaKnown RBP26.94■■□□□ 1.9
RXRB-204ENST00000483281 DUSP27Q5VZP5 1158 aa26.93■■□□□ 1.9
RXRB-204ENST00000483281 MBIPQ9NS73 344 aa26.93■■□□□ 1.9
RXRB-204ENST00000483281 KDM3BQ7LBC6 1761 aa26.92■■□□□ 1.9
RXRB-204ENST00000483281 PIGBQ92521 554 aa26.92■■□□□ 1.9
RXRB-204ENST00000483281 TSPYL4Q9UJ04 414 aa26.92■■□□□ 1.9
RXRB-204ENST00000483281 SUPT16HQ9Y5B9 1047 aaKnown RBP26.92■■□□□ 1.9
RXRB-204ENST00000483281 FAM182BQ5T319 152 aa26.91■■□□□ 1.9
RXRB-204ENST00000483281 MIS18AQ9NYP9 233 aa26.91■■□□□ 1.9
RXRB-204ENST00000483281 ACSBG1Q96GR2 724 aa26.9■■□□□ 1.9
RXRB-204ENST00000483281 FANCIQ9NVI1 1328 aa26.9■■□□□ 1.9
RXRB-204ENST00000483281 NHSQ6T4R5 1651 aa26.89■■□□□ 1.9
RXRB-204ENST00000483281 ZNF790Q6PG37 636 aa26.89■■□□□ 1.89
RXRB-204ENST00000483281 TSR2Q969E8 191 aaKnown RBP26.88■■□□□ 1.89
RXRB-204ENST00000483281 SYTL4Q96C24 671 aaPredicted RBP26.88■■□□□ 1.89
RXRB-204ENST00000483281 PAPPAQ13219 1627 aa26.87■■□□□ 1.89
RXRB-204ENST00000483281 KCNQ2O43526 872 aa26.87■■□□□ 1.89
RXRB-204ENST00000483281 BCL11BQ9C0K0 894 aaPredicted RBP26.86■■□□□ 1.89
RXRB-204ENST00000483281 EIF4A1P60842 406 aaKnown RBP26.84■■□□□ 1.89
RXRB-204ENST00000483281 ATG3Q9NT62 314 aa26.84■■□□□ 1.89
RXRB-204ENST00000483281 SLC39A6Q13433 755 aa26.84■■□□□ 1.89
RXRB-204ENST00000483281 UBR2Q8IWV8 1755 aa26.84■■□□□ 1.89
RXRB-204ENST00000483281 HEG1Q9ULI3 1381 aa26.83■■□□□ 1.89
RXRB-204ENST00000483281 KCNQ3O43525 872 aa26.83■■□□□ 1.89
RXRB-204ENST00000483281 TTC5Q8N0Z6 440 aa26.83■■□□□ 1.89
RXRB-204ENST00000483281 ASAP1Q9ULH1 1129 aa26.82■■□□□ 1.88
RXRB-204ENST00000483281 SOS1Q07889 1333 aaPredicted RBP26.82■■□□□ 1.88
RXRB-204ENST00000483281 CT47B1P0C2W7 299 aaPredicted RBP26.82■■□□□ 1.88
RXRB-204ENST00000483281 EXOSC9Q06265 439 aaKnown RBP26.82■■□□□ 1.88
RXRB-204ENST00000483281 SMARCC1Q92922 1105 aaPredicted RBP26.82■■□□□ 1.88
RXRB-204ENST00000483281 BTAF1O14981 1849 aa26.81■■□□□ 1.88
RXRB-204ENST00000483281 FMNL2Q96PY5 1086 aa26.8■■□□□ 1.88
RXRB-204ENST00000483281 C8orf58Q8NAV2 365 aa26.78■■□□□ 1.88
RXRB-204ENST00000483281 HOXB7P09629 217 aa26.78■■□□□ 1.88
RXRB-204ENST00000483281 PTF1AQ7RTS3 328 aa26.78■■□□□ 1.88
RXRB-204ENST00000483281 ZNF496Q96IT1 587 aaPredicted RBP26.78■■□□□ 1.88
RXRB-204ENST00000483281 KCPQ6ZWJ8 1503 aa26.78■■□□□ 1.88
RXRB-204ENST00000483281 VSIG10Q8N0Z9 540 aa26.77■■□□□ 1.88
RXRB-204ENST00000483281 TRIM37O94972 964 aa26.77■■□□□ 1.88
RXRB-204ENST00000483281 VAMP4O75379 141 aa26.76■■□□□ 1.87
RXRB-204ENST00000483281 GIGYF1O75420 1035 aaPredicted RBP26.76■■□□□ 1.87
RXRB-204ENST00000483281 ZNF428Q96B54 188 aa26.76■■□□□ 1.87
RXRB-204ENST00000483281 TWISTNBQ3B726 338 aaPredicted RBP26.75■■□□□ 1.87
RXRB-204ENST00000483281 CHMP4AQ9BY43 222 aa26.75■■□□□ 1.87
RXRB-204ENST00000483281 TSPYL6Q8N831 410 aa26.75■■□□□ 1.87
RXRB-204ENST00000483281 SNRPA1P09661 255 aaKnown RBP26.74■■□□□ 1.87
RXRB-204ENST00000483281 ZNF831Q5JPB2 1677 aa26.74■■□□□ 1.87
RXRB-204ENST00000483281 KRT24Q2M2I5 525 aa26.73■■□□□ 1.87
RXRB-204ENST00000483281 PALLDQ8WX93 1383 aa26.72■■□□□ 1.87
RXRB-204ENST00000483281 PTCD1O75127 700 aaKnown RBP26.72■■□□□ 1.87
RXRB-204ENST00000483281 TEX13AQ9BXU3 409 aaPredicted RBP26.72■■□□□ 1.87
RXRB-204ENST00000483281 TSHZ2Q9NRE2 1034 aa26.71■■□□□ 1.87
RXRB-204ENST00000483281 EP400Q96L91 3159 aa26.71■■□□□ 1.87
RXRB-204ENST00000483281 ELL2O00472 640 aaPredicted RBP26.71■■□□□ 1.87
RXRB-204ENST00000483281 LY75O60449 1722 aa26.71■■□□□ 1.87
RXRB-204ENST00000483281 PLSCR1O15162 318 aa26.7■■□□□ 1.86
RXRB-204ENST00000483281 RBM42Q9BTD8 480 aaKnown RBP26.7■■□□□ 1.86
RXRB-204ENST00000483281 CICQ96RK0 1608 aaPredicted RBP26.69■■□□□ 1.86
RXRB-204ENST00000483281 LOC102724428A0A0B4J2F2 783 aa26.69■■□□□ 1.86
RXRB-204ENST00000483281 SIK1P57059 783 aa26.69■■□□□ 1.86
RXRB-204ENST00000483281 SLC4A9Q96Q91 983 aa26.68■■□□□ 1.86
RXRB-204ENST00000483281 TNS1Q9HBL0 1735 aaKnown RBP26.68■■□□□ 1.86
RXRB-204ENST00000483281 CACNA1FO60840 1977 aa26.67■■□□□ 1.86
RXRB-204ENST00000483281 C5P01031 1676 aa26.66■■□□□ 1.86
RXRB-204ENST00000483281 ALDH1L2Q3SY69 923 aa26.66■■□□□ 1.86
RXRB-204ENST00000483281 CCDC125Q86Z20 511 aa26.66■■□□□ 1.86
RXRB-204ENST00000483281 USP16Q9Y5T5 823 aa26.66■■□□□ 1.86
RXRB-204ENST00000483281 LAMB4A4D0S4 1761 aa26.65■■□□□ 1.86
RXRB-204ENST00000483281 PRAMEF22A3QJZ6 481 aa26.64■■□□□ 1.86
RXRB-204ENST00000483281 APBA3O96018 575 aa26.64■■□□□ 1.86
RXRB-204ENST00000483281 HMGB2P26583 209 aaKnown RBP26.64■■□□□ 1.86
RXRB-204ENST00000483281 ATP6V1AP38606 617 aa26.64■■□□□ 1.86
RXRB-204ENST00000483281 RARSP54136 660 aaKnown RBP26.64■■□□□ 1.86
RXRB-204ENST00000483281 CCDC30Q5VVM6 783 aa26.64■■□□□ 1.86
RXRB-204ENST00000483281 RCAN3Q9UKA8 241 aa26.64■■□□□ 1.86
RXRB-204ENST00000483281 ANP32EQ9BTT0 268 aa26.64■■□□□ 1.85
RXRB-204ENST00000483281 RGPD3A6NKT7 1758 aaPredicted RBP26.63■■□□□ 1.85
RXRB-204ENST00000483281 RGPD4Q7Z3J3 1758 aa26.63■■□□□ 1.85
RXRB-204ENST00000483281 TJP1Q07157 1748 aa26.63■■□□□ 1.85
RXRB-204ENST00000483281 HDGFL1Q5TGJ6 251 aa26.63■■□□□ 1.85
RXRB-204ENST00000483281 STARD3NLO95772 234 aa26.62■■□□□ 1.85
RXRB-204ENST00000483281 BRPF1P55201 1214 aaPredicted RBP26.62■■□□□ 1.85
RXRB-204ENST00000483281 SLC27A3Q5K4L6 730 aa26.62■■□□□ 1.85
RXRB-204ENST00000483281 DNAJC10Q8IXB1 793 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms