RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 RBM42Q9BTD8 480 aaKnown RBP24.43■■□□□ 1.5
SMIM4-204ENST00000482728 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
SMIM4-204ENST00000482728 PDGFDQ9GZP0 370 aaPredicted RBP24.41■■□□□ 1.5
SMIM4-204ENST00000482728 SPON1Q9HCB6 807 aa24.41■■□□□ 1.5
SMIM4-204ENST00000482728 SCN11AQ9UI33 1791 aa24.4■■□□□ 1.5
SMIM4-204ENST00000482728 TEFQ10587 303 aa24.4■■□□□ 1.5
SMIM4-204ENST00000482728 RTF1Q92541 710 aaKnown RBP24.4■■□□□ 1.5
SMIM4-204ENST00000482728 SRCAPQ6ZRS2 3230 aa24.4■■□□□ 1.5
SMIM4-204ENST00000482728 PTCD1O75127 700 aaKnown RBP24.39■■□□□ 1.49
SMIM4-204ENST00000482728 IL17REQ8NFR9 667 aa24.39■■□□□ 1.49
SMIM4-204ENST00000482728 PAPPAQ13219 1627 aa24.39■■□□□ 1.49
SMIM4-204ENST00000482728 ZBTB7AO95365 584 aa24.38■■□□□ 1.49
SMIM4-204ENST00000482728 WDR43Q15061 677 aaKnown RBP eCLIP24.37■■□□□ 1.49
SMIM4-204ENST00000482728 AK7Q96M32 723 aa24.37■■□□□ 1.49
SMIM4-204ENST00000482728 MAPK8IP3Q9UPT6 1336 aa24.36■■□□□ 1.49
SMIM4-204ENST00000482728 MSH5O43196 834 aa24.36■■□□□ 1.49
SMIM4-204ENST00000482728 ITPK1Q13572 414 aa24.36■■□□□ 1.49
SMIM4-204ENST00000482728 ATF5Q9Y2D1 282 aaPredicted RBP24.36■■□□□ 1.49
SMIM4-204ENST00000482728 LINC00116Q8NCU8 138 aa24.35■■□□□ 1.49
SMIM4-204ENST00000482728 PNPLA7Q6ZV29 1317 aa24.35■■□□□ 1.49
SMIM4-204ENST00000482728 ANP32CO43423 234 aa24.34■■□□□ 1.49
SMIM4-204ENST00000482728 HTATSF1O43719 755 aaKnown RBP24.34■■□□□ 1.49
SMIM4-204ENST00000482728 SLC39A6Q13433 755 aa24.34■■□□□ 1.49
SMIM4-204ENST00000482728 FLAD1Q8NFF5 587 aa24.34■■□□□ 1.49
SMIM4-204ENST00000482728 SLC16A10Q8TF71 515 aa24.34■■□□□ 1.49
SMIM4-204ENST00000482728 PLEKHF1Q96S99 279 aa24.34■■□□□ 1.49
SMIM4-204ENST00000482728 MTFR1LQ9H019 292 aa24.34■■□□□ 1.49
SMIM4-204ENST00000482728 SLC4A9Q96Q91 983 aa24.33■■□□□ 1.49
SMIM4-204ENST00000482728 PPP1R1BQ9UD71 204 aaPredicted RBP24.33■■□□□ 1.49
SMIM4-204ENST00000482728 C5P01031 1676 aa24.33■■□□□ 1.49
SMIM4-204ENST00000482728 TTC5Q8N0Z6 440 aa24.32■■□□□ 1.48
SMIM4-204ENST00000482728 TAF1LQ8IZX4 1826 aa24.31■■□□□ 1.48
SMIM4-204ENST00000482728 NFE2L2Q16236 605 aa24.31■■□□□ 1.48
SMIM4-204ENST00000482728 MCM10Q7L590 875 aa24.31■■□□□ 1.48
SMIM4-204ENST00000482728 COL23A1Q86Y22 540 aaPredicted RBP24.31■■□□□ 1.48
SMIM4-204ENST00000482728 LRP5O75197 1615 aa24.31■■□□□ 1.48
SMIM4-204ENST00000482728 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
SMIM4-204ENST00000482728 CASZ1Q86V15 1759 aa24.3■■□□□ 1.48
SMIM4-204ENST00000482728 MRC1P22897 1456 aa24.3■■□□□ 1.48
SMIM4-204ENST00000482728 GNPATO15228 680 aa24.29■■□□□ 1.48
SMIM4-204ENST00000482728 ADAMTS7Q9UKP4 1686 aa24.29■■□□□ 1.48
SMIM4-204ENST00000482728 CEMIPQ8WUJ3 1361 aa24.29■■□□□ 1.48
SMIM4-204ENST00000482728 C4BP0C0L5 1744 aa24.28■■□□□ 1.48
SMIM4-204ENST00000482728 BTBD11A6QL63 1104 aa24.28■■□□□ 1.48
SMIM4-204ENST00000482728 DCTN1Q14203 1278 aa24.28■■□□□ 1.48
SMIM4-204ENST00000482728 RC3H1Q5TC82 1133 aaKnown RBP24.28■■□□□ 1.48
SMIM4-204ENST00000482728 ADAMTS8Q9UP79 889 aa24.28■■□□□ 1.48
SMIM4-204ENST00000482728 PHF14O94880 888 aa24.27■■□□□ 1.48
SMIM4-204ENST00000482728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.26■■□□□ 1.47
SMIM4-204ENST00000482728 SSFA2P28290 1259 aa24.26■■□□□ 1.47
SMIM4-204ENST00000482728 ZNF790Q6PG37 636 aa24.26■■□□□ 1.47
SMIM4-204ENST00000482728 RTCBQ9Y3I0 505 aaKnown RBP24.26■■□□□ 1.47
SMIM4-204ENST00000482728 QSER1Q2KHR3 1735 aa24.25■■□□□ 1.47
SMIM4-204ENST00000482728 PTGER2P43116 358 aa24.25■■□□□ 1.47
SMIM4-204ENST00000482728 CCDC146Q8IYE0 955 aa24.25■■□□□ 1.47
SMIM4-204ENST00000482728 POLD1P28340 1107 aa24.24■■□□□ 1.47
SMIM4-204ENST00000482728 RIPK4P57078 832 aa24.24■■□□□ 1.47
SMIM4-204ENST00000482728 TAF7Q15545 349 aaPredicted RBP24.24■■□□□ 1.47
SMIM4-204ENST00000482728 SMIM5Q71RC9 77 aa24.24■■□□□ 1.47
SMIM4-204ENST00000482728 DNAJC10Q8IXB1 793 aa24.24■■□□□ 1.47
SMIM4-204ENST00000482728 VSIG10Q8N0Z9 540 aa24.24■■□□□ 1.47
SMIM4-204ENST00000482728 RUNDC1Q96C34 613 aa24.24■■□□□ 1.47
SMIM4-204ENST00000482728 CNTNAP4Q9C0A0 1308 aa24.24■■□□□ 1.47
SMIM4-204ENST00000482728 CRKLP46109 303 aaKnown RBP24.23■■□□□ 1.47
SMIM4-204ENST00000482728 TRAPPC3LQ5T215 181 aa24.23■■□□□ 1.47
SMIM4-204ENST00000482728 ZNF831Q5JPB2 1677 aa24.23■■□□□ 1.47
SMIM4-204ENST00000482728 TUBGCP6Q96RT7 1819 aa24.23■■□□□ 1.47
SMIM4-204ENST00000482728 RPS6KA4O75676 772 aa24.22■■□□□ 1.47
SMIM4-204ENST00000482728 TMPOP42166 694 aaKnown RBP24.22■■□□□ 1.47
SMIM4-204ENST00000482728 AMIGO3Q86WK7 504 aa24.22■■□□□ 1.47
SMIM4-204ENST00000482728 ZNF496Q96IT1 587 aaPredicted RBP24.22■■□□□ 1.47
SMIM4-204ENST00000482728 FMNL2Q96PY5 1086 aa24.22■■□□□ 1.47
SMIM4-204ENST00000482728 STARD3NLO95772 234 aa24.2■■□□□ 1.46
SMIM4-204ENST00000482728 LMOD3Q0VAK6 560 aa24.2■■□□□ 1.46
SMIM4-204ENST00000482728 NEUROD2Q15784 382 aa24.2■■□□□ 1.46
SMIM4-204ENST00000482728 TEX13AQ9BXU3 409 aaPredicted RBP24.2■■□□□ 1.46
SMIM4-204ENST00000482728 KCNQ3O43525 872 aa24.19■■□□□ 1.46
SMIM4-204ENST00000482728 CYP19A1P11511 503 aaPredicted RBP24.19■■□□□ 1.46
SMIM4-204ENST00000482728 ADRA2BP18089 450 aa24.19■■□□□ 1.46
SMIM4-204ENST00000482728 MSL1Q68DK7 614 aa24.19■■□□□ 1.46
SMIM4-204ENST00000482728 ARXQ96QS3 562 aa24.19■■□□□ 1.46
SMIM4-204ENST00000482728 SGIP1Q9BQI5 828 aa24.19■■□□□ 1.46
SMIM4-204ENST00000482728 CCDC87Q9NVE4 849 aa24.19■■□□□ 1.46
SMIM4-204ENST00000482728 RRP7AQ9Y3A4 280 aaKnown RBP24.19■■□□□ 1.46
SMIM4-204ENST00000482728 UBR3Q6ZT12 1888 aa24.18■■□□□ 1.46
SMIM4-204ENST00000482728 CCDC184Q52MB2 194 aa24.18■■□□□ 1.46
SMIM4-204ENST00000482728 PNISRQ8TF01 805 aaKnown RBP24.18■■□□□ 1.46
SMIM4-204ENST00000482728 THUMPD2Q9BTF0 503 aaKnown RBP24.18■■□□□ 1.46
SMIM4-204ENST00000482728 MRS2Q9HD23 443 aa24.18■■□□□ 1.46
SMIM4-204ENST00000482728 KCPQ6ZWJ8 1503 aa24.18■■□□□ 1.46
SMIM4-204ENST00000482728 DLG5Q8TDM6 1919 aa24.18■■□□□ 1.46
SMIM4-204ENST00000482728 HEG1Q9ULI3 1381 aa24.17■■□□□ 1.46
SMIM4-204ENST00000482728 SIPA1L3O60292 1781 aaPredicted RBP24.17■■□□□ 1.46
SMIM4-204ENST00000482728 RFC4P35249 363 aa24.17■■□□□ 1.46
SMIM4-204ENST00000482728 INTS5Q6P9B9 1019 aaKnown RBP24.17■■□□□ 1.46
SMIM4-204ENST00000482728 ARHGEF1Q92888 912 aaKnown RBP24.17■■□□□ 1.46
SMIM4-204ENST00000482728 MIS18AQ9NYP9 233 aa24.17■■□□□ 1.46
SMIM4-204ENST00000482728 MYH14Q7Z406 1995 aaKnown RBP24.15■■□□□ 1.46
SMIM4-204ENST00000482728 COL5A3P25940 1745 aaPredicted RBP24.15■■□□□ 1.46
SMIM4-204ENST00000482728 TJP1Q07157 1748 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms