RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 SRA1Q9HD15 236 aaKnown RBP10.06□□□□□ -0.8
RBM39-233ENST00000482563 DOLKQ9UPQ8 538 aa10.06□□□□□ -0.8
RBM39-233ENST00000482563 FZD6O60353 706 aa10.05□□□□□ -0.8
RBM39-233ENST00000482563 STK10O94804 968 aaKnown RBP10.05□□□□□ -0.8
RBM39-233ENST00000482563 XRCC5P13010 732 aaKnown RBP10.05□□□□□ -0.8
RBM39-233ENST00000482563 MCCD1P59942 119 aaPredicted RBP10.05□□□□□ -0.8
RBM39-233ENST00000482563 OXLD1Q5BKU9 147 aa10.05□□□□□ -0.8
RBM39-233ENST00000482563 COL26A1Q96A83 441 aa10.05□□□□□ -0.8
RBM39-233ENST00000482563 GPSM3Q9Y4H4 160 aa10.05□□□□□ -0.8
RBM39-233ENST00000482563 POTEFA5A3E0 1075 aa10.04□□□□□ -0.8
RBM39-233ENST00000482563 CFHP08603 1231 aa10.04□□□□□ -0.8
RBM39-233ENST00000482563 FGD1P98174 961 aa10.04□□□□□ -0.8
RBM39-233ENST00000482563 FAM129BQ96TA1 746 aa10.04□□□□□ -0.8
RBM39-233ENST00000482563 ENPP3O14638 875 aa10.04□□□□□ -0.8
RBM39-233ENST00000482563 ZNF654Q8IZM8 581 aa10.04□□□□□ -0.8
RBM39-233ENST00000482563 TMC1Q8TDI8 760 aa10.04□□□□□ -0.8
RBM39-233ENST00000482563 GABBR1Q9UBS5 961 aa10.04□□□□□ -0.8
RBM39-233ENST00000482563 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
RBM39-233ENST00000482563 SERINC3Q13530 473 aa10.03□□□□□ -0.8
RBM39-233ENST00000482563 MORC4Q8TE76 937 aa10.03□□□□□ -0.8
RBM39-233ENST00000482563 CITED4Q96RK1 184 aa10.03□□□□□ -0.8
RBM39-233ENST00000482563 SLC27A5Q9Y2P5 690 aa10.03□□□□□ -0.8
RBM39-233ENST00000482563 PTK2Q05397 1052 aa10.02□□□□□ -0.8
RBM39-233ENST00000482563 MORN1Q5T089 497 aa10.02□□□□□ -0.8
RBM39-233ENST00000482563 PDXDC2PQ6P474 469 aa10.02□□□□□ -0.8
RBM39-233ENST00000482563 ADAM32Q8TC27 787 aa10.02□□□□□ -0.8
RBM39-233ENST00000482563 DMRTB1Q96MA1 342 aa10.02□□□□□ -0.8
RBM39-233ENST00000482563 PMM1Q92871 262 aa10.02□□□□□ -0.81
RBM39-233ENST00000482563 CFHR5Q9BXR6 569 aa10.02□□□□□ -0.81
RBM39-233ENST00000482563 SAP130Q9H0E3 1048 aa10.02□□□□□ -0.81
RBM39-233ENST00000482563 MAGEC2Q9UBF1 373 aaPredicted RBP10.02□□□□□ -0.81
RBM39-233ENST00000482563 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
RBM39-233ENST00000482563 PTPREP23469 700 aa10.01□□□□□ -0.81
RBM39-233ENST00000482563 HSP90AB2PQ58FF8 381 aa10.01□□□□□ -0.81
RBM39-233ENST00000482563 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
RBM39-233ENST00000482563 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
RBM39-233ENST00000482563 CYLDQ9NQC7 956 aa10.01□□□□□ -0.81
RBM39-233ENST00000482563 DDX56Q9NY93 547 aaKnown RBP10.01□□□□□ -0.81
RBM39-233ENST00000482563 G3BP2Q9UN86 482 aaKnown RBP10.01□□□□□ -0.81
RBM39-233ENST00000482563 SEC24BO95487 1268 aa10□□□□□ -0.81
RBM39-233ENST00000482563 ITGAEP38570 1179 aa10□□□□□ -0.81
RBM39-233ENST00000482563 ENOX2Q16206 610 aaKnown RBP10□□□□□ -0.81
RBM39-233ENST00000482563 NFE2L2Q16236 605 aa10□□□□□ -0.81
RBM39-233ENST00000482563 ALKBH8Q96BT7 664 aaKnown RBP10□□□□□ -0.81
RBM39-233ENST00000482563 MRFAP1L1Q96HT8 127 aa10□□□□□ -0.81
RBM39-233ENST00000482563 RNPC3Q96LT9 517 aaKnown RBP10□□□□□ -0.81
RBM39-233ENST00000482563 ATF4P18848 351 aaPredicted RBP9.99□□□□□ -0.81
RBM39-233ENST00000482563 EIF1AXP47813 144 aaKnown RBP9.99□□□□□ -0.81
RBM39-233ENST00000482563 GJA8P48165 433 aa9.99□□□□□ -0.81
RBM39-233ENST00000482563 PUS10Q3MIT2 529 aaKnown RBP9.99□□□□□ -0.81
RBM39-233ENST00000482563 USP48Q86UV5 1035 aa9.99□□□□□ -0.81
RBM39-233ENST00000482563 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.99□□□□□ -0.814e-23■■□□□ 13.8
RBM39-233ENST00000482563 GNA15P30679 374 aa9.99□□□□□ -0.81
RBM39-233ENST00000482563 CRELD1Q96HD1 420 aa9.99□□□□□ -0.81
RBM39-233ENST00000482563 KIAA1468Q9P260 1216 aa9.99□□□□□ -0.81
RBM39-233ENST00000482563 ESPNB1AK53 854 aa9.98□□□□□ -0.81
RBM39-233ENST00000482563 AMPD3Q01432 767 aa9.98□□□□□ -0.81
RBM39-233ENST00000482563 ATP2B2Q01814 1243 aa9.98□□□□□ -0.81
RBM39-233ENST00000482563 PTPN12Q05209 780 aaKnown RBP9.98□□□□□ -0.81
RBM39-233ENST00000482563 BLOC1S3Q6QNY0 202 aa9.98□□□□□ -0.81
RBM39-233ENST00000482563 SMC5Q8IY18 1101 aa9.98□□□□□ -0.81
RBM39-233ENST00000482563 EVI5LQ96CN4 794 aa9.98□□□□□ -0.81
RBM39-233ENST00000482563 LHX6Q9UPM6 363 aa9.98□□□□□ -0.81
RBM39-233ENST00000482563 PNMA6FA0A0J9YX94 578 aa9.97□□□□□ -0.81
RBM39-233ENST00000482563 M0R2N6 131 aa9.97□□□□□ -0.81
RBM39-233ENST00000482563 DNAJC6O75061 913 aa9.97□□□□□ -0.81
RBM39-233ENST00000482563 PCDH10Q9P2E7 1040 aa9.97□□□□□ -0.81
RBM39-233ENST00000482563 POTEMA6NI47 508 aa9.96□□□□□ -0.81
RBM39-233ENST00000482563 U2SURPO15042 1029 aaKnown RBP9.96□□□□□ -0.81
RBM39-233ENST00000482563 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.81
RBM39-233ENST00000482563 NIF3L1Q9GZT8 377 aa9.96□□□□□ -0.81
RBM39-233ENST00000482563 SPC25Q9HBM1 224 aa9.96□□□□□ -0.81
RBM39-233ENST00000482563 GIGYF1O75420 1035 aaPredicted RBP9.96□□□□□ -0.82
RBM39-233ENST00000482563 VPS37DQ86XT2 251 aa9.96□□□□□ -0.82
RBM39-233ENST00000482563 IGFBP4P22692 258 aa9.95□□□□□ -0.82
RBM39-233ENST00000482563 CTHP32929 405 aa9.95□□□□□ -0.82
RBM39-233ENST00000482563 CBLBQ13191 982 aa9.95□□□□□ -0.82
RBM39-233ENST00000482563 PTPRNQ16849 979 aa9.95□□□□□ -0.82
RBM39-233ENST00000482563 Q3C1V9 767 aa9.95□□□□□ -0.82
RBM39-233ENST00000482563 PLEKHG4Q58EX7 1191 aa9.95□□□□□ -0.82
RBM39-233ENST00000482563 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.95□□□□□ -0.82
RBM39-233ENST00000482563 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
RBM39-233ENST00000482563 ZBTB24O43167 697 aaPredicted RBP9.94□□□□□ -0.82
RBM39-233ENST00000482563 FOXO3O43524 673 aa9.94□□□□□ -0.82
RBM39-233ENST00000482563 CLCN6P51797 869 aa9.94□□□□□ -0.82
RBM39-233ENST00000482563 USB1Q9BQ65 265 aaKnown RBP9.94□□□□□ -0.82
RBM39-233ENST00000482563 AK5Q9Y6K8 562 aa9.94□□□□□ -0.82
RBM39-233ENST00000482563 TNFRSF10BO14763 440 aa9.93□□□□□ -0.82
RBM39-233ENST00000482563 MZF1P28698 734 aaPredicted RBP9.93□□□□□ -0.82
RBM39-233ENST00000482563 ALG1LQ6GMV1 187 aa9.93□□□□□ -0.82
RBM39-233ENST00000482563 APBB1IPQ7Z5R6 666 aaPredicted RBP9.93□□□□□ -0.82
RBM39-233ENST00000482563 GPKOWQ92917 476 aaPredicted RBP eCLIP9.93□□□□□ -0.82
RBM39-233ENST00000482563 S100BP04271 92 aaPredicted RBP9.93□□□□□ -0.82
RBM39-233ENST00000482563 PAK2Q13177 524 aa9.93□□□□□ -0.82
RBM39-233ENST00000482563 GPR153Q6NV75 609 aa9.92□□□□□ -0.82
RBM39-233ENST00000482563 FMNL3Q8IVF7 1028 aa9.92□□□□□ -0.82
RBM39-233ENST00000482563 CCDC146Q8IYE0 955 aa9.92□□□□□ -0.82
RBM39-233ENST00000482563 MKL1Q969V6 931 aa9.92□□□□□ -0.82
RBM39-233ENST00000482563 ARHGAP9Q9BRR9 750 aa9.92□□□□□ -0.82
RBM39-233ENST00000482563 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms