RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
IFT88-206ENST00000482172 ZNF428Q96B54 188 aa16.18■□□□□ 0.18
IFT88-206ENST00000482172 SLC52A2Q9HAB3 445 aa16.18■□□□□ 0.18
IFT88-206ENST00000482172 TSPYL4Q9UJ04 414 aa16.18■□□□□ 0.18
IFT88-206ENST00000482172 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
IFT88-206ENST00000482172 GLI3P10071 1580 aa16.17■□□□□ 0.18
IFT88-206ENST00000482172 ZNF772Q68DY9 489 aaPredicted RBP16.17■□□□□ 0.18
IFT88-206ENST00000482172 THSD7AQ9UPZ6 1657 aa16.17■□□□□ 0.18
IFT88-206ENST00000482172 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
IFT88-206ENST00000482172 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
IFT88-206ENST00000482172 FAM98CQ17RN3 349 aaKnown RBP16.16■□□□□ 0.18
IFT88-206ENST00000482172 QTRT2Q9H974 415 aaKnown RBP16.16■□□□□ 0.18
IFT88-206ENST00000482172 RNF123Q5XPI4 1314 aa16.16■□□□□ 0.18
IFT88-206ENST00000482172 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
IFT88-206ENST00000482172 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
IFT88-206ENST00000482172 CABP4P57796 275 aa16.15■□□□□ 0.18
IFT88-206ENST00000482172 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
IFT88-206ENST00000482172 MIS18AQ9NYP9 233 aa16.14■□□□□ 0.17
IFT88-206ENST00000482172 VAMP4O75379 141 aa16.13■□□□□ 0.17
IFT88-206ENST00000482172 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
IFT88-206ENST00000482172 C8orf58Q8NAV2 365 aa16.13■□□□□ 0.17
IFT88-206ENST00000482172 NFATC2IPQ8NCF5 419 aa16.13■□□□□ 0.17
IFT88-206ENST00000482172 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
IFT88-206ENST00000482172 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
IFT88-206ENST00000482172 MARCH10Q8NA82 808 aaPredicted RBP16.12■□□□□ 0.17
IFT88-206ENST00000482172 HOXB7P09629 217 aa16.11■□□□□ 0.17
IFT88-206ENST00000482172 EIF4A1P60842 406 aaKnown RBP16.11■□□□□ 0.17
IFT88-206ENST00000482172 TSPYL6Q8N831 410 aa16.11■□□□□ 0.17
IFT88-206ENST00000482172 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
IFT88-206ENST00000482172 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
IFT88-206ENST00000482172 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
IFT88-206ENST00000482172 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
IFT88-206ENST00000482172 HEG1Q9ULI3 1381 aa16.1■□□□□ 0.17
IFT88-206ENST00000482172 BCL9O00512 1426 aa16.1■□□□□ 0.17
IFT88-206ENST00000482172 RBM6P78332 1123 aaKnown RBP16.09■□□□□ 0.17
IFT88-206ENST00000482172 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
IFT88-206ENST00000482172 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
IFT88-206ENST00000482172 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
IFT88-206ENST00000482172 A0A0G2JS52 829 aa16.07■□□□□ 0.16
IFT88-206ENST00000482172 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
IFT88-206ENST00000482172 KCNQ3O43525 872 aa16.07■□□□□ 0.16
IFT88-206ENST00000482172 MYT1Q01538 1121 aa16.07■□□□□ 0.16
IFT88-206ENST00000482172 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
IFT88-206ENST00000482172 SEPT12Q8IYM1 358 aa16.07■□□□□ 0.16
IFT88-206ENST00000482172 TTC5Q8N0Z6 440 aa16.07■□□□□ 0.16
IFT88-206ENST00000482172 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
IFT88-206ENST00000482172 ITGB4P16144 1822 aa16.06■□□□□ 0.16
IFT88-206ENST00000482172 BCAR3O75815 825 aa16.06■□□□□ 0.16
IFT88-206ENST00000482172 NEFLP07196 543 aa16.06■□□□□ 0.16
IFT88-206ENST00000482172 SSH1Q8WYL5 1049 aa16.06■□□□□ 0.16
IFT88-206ENST00000482172 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
IFT88-206ENST00000482172 SLC39A6Q13433 755 aa16.05■□□□□ 0.16
IFT88-206ENST00000482172 PIGBQ92521 554 aa16.05■□□□□ 0.16
IFT88-206ENST00000482172 FMNL2Q96PY5 1086 aa16.05■□□□□ 0.16
IFT88-206ENST00000482172 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
IFT88-206ENST00000482172 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
IFT88-206ENST00000482172 KIF16BQ96L93 1317 aa16.04■□□□□ 0.16
IFT88-206ENST00000482172 CCDC30Q5VVM6 783 aa16.04■□□□□ 0.16
IFT88-206ENST00000482172 UBR2Q8IWV8 1755 aa16.04■□□□□ 0.16
IFT88-206ENST00000482172 RXRBP28702 533 aa16.03■□□□□ 0.16
IFT88-206ENST00000482172 PRIM1P49642 420 aaKnown RBP16.03■□□□□ 0.16
IFT88-206ENST00000482172 MRPL50Q8N5N7 158 aaKnown RBP16.03■□□□□ 0.16
IFT88-206ENST00000482172 ZNF496Q96IT1 587 aaPredicted RBP16.03■□□□□ 0.16
IFT88-206ENST00000482172 RGS17Q9UGC6 210 aaPredicted RBP16.03■□□□□ 0.16
IFT88-206ENST00000482172 IPO8O15397 1037 aaKnown RBP16.02■□□□□ 0.16
IFT88-206ENST00000482172 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.16
IFT88-206ENST00000482172 ARHGAP45Q92619 1136 aa16.02■□□□□ 0.16
IFT88-206ENST00000482172 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
IFT88-206ENST00000482172 KCPQ6ZWJ8 1503 aa16.02■□□□□ 0.15
IFT88-206ENST00000482172 MS4A1P11836 297 aa16.01■□□□□ 0.15
IFT88-206ENST00000482172 PDE3AQ14432 1141 aa16.01■□□□□ 0.15
IFT88-206ENST00000482172 HDGFL1Q5TGJ6 251 aa16.01■□□□□ 0.15
IFT88-206ENST00000482172 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
IFT88-206ENST00000482172 VSIG10Q8N0Z9 540 aa16.01■□□□□ 0.15
IFT88-206ENST00000482172 BCL2L13Q9BXK5 485 aa16.01■□□□□ 0.15
IFT88-206ENST00000482172 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
IFT88-206ENST00000482172 ZKSCAN2Q63HK3 967 aa16■□□□□ 0.15
IFT88-206ENST00000482172 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
IFT88-206ENST00000482172 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
IFT88-206ENST00000482172 CACNA1FO60840 1977 aa15.99■□□□□ 0.15
IFT88-206ENST00000482172 PLIN1O60240 522 aa15.99■□□□□ 0.15
IFT88-206ENST00000482172 KCNA4P22459 653 aa15.99■□□□□ 0.15
IFT88-206ENST00000482172 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
IFT88-206ENST00000482172 SMARCC1Q92922 1105 aaPredicted RBP15.99■□□□□ 0.15
IFT88-206ENST00000482172 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
IFT88-206ENST00000482172 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
IFT88-206ENST00000482172 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
IFT88-206ENST00000482172 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
IFT88-206ENST00000482172 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
IFT88-206ENST00000482172 FAM196AQ6ZSG2 479 aa15.98■□□□□ 0.15
IFT88-206ENST00000482172 FRAT1Q92837 279 aaPredicted RBP15.98■□□□□ 0.15
IFT88-206ENST00000482172 NOB1Q9ULX3 412 aaKnown RBP15.98■□□□□ 0.15
IFT88-206ENST00000482172 PTPRCP08575 1304 aa15.97■□□□□ 0.15
IFT88-206ENST00000482172 BRWD3Q6RI45 1802 aa15.97■□□□□ 0.15
IFT88-206ENST00000482172 EIF2S2P20042 333 aaKnown RBP15.97■□□□□ 0.15
IFT88-206ENST00000482172 POTEAQ6S8J7 498 aa15.97■□□□□ 0.15
IFT88-206ENST00000482172 ATF7IPQ6VMQ6 1270 aa15.97■□□□□ 0.15
IFT88-206ENST00000482172 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
IFT88-206ENST00000482172 DBF4Q9UBU7 674 aaPredicted RBP15.97■□□□□ 0.15
IFT88-206ENST00000482172 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms