RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 DLG5Q8TDM6 1919 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 KDRP35968 1356 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 PALLDQ8WX93 1383 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 ERVV-2B6SEH9 535 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 PTCD1O75127 700 aaKnown RBP8.92□□□□□ -0.98
PRDM1-206ENST00000481163 NEFMP07197 916 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 ATP6V1AP38606 617 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 SLC27A3Q5K4L6 730 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 SMIM5Q71RC9 77 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 PHACTR3Q96KR7 559 aa8.92□□□□□ -0.98
PRDM1-206ENST00000481163 C5P01031 1676 aa8.91□□□□□ -0.98
PRDM1-206ENST00000481163 KDM6AO15550 1401 aaPredicted RBP8.91□□□□□ -0.98
PRDM1-206ENST00000481163 RNMTO43148 476 aaKnown RBP8.91□□□□□ -0.98
PRDM1-206ENST00000481163 SLC39A6Q13433 755 aa8.91□□□□□ -0.98
PRDM1-206ENST00000481163 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
PRDM1-206ENST00000481163 ATG3Q9NT62 314 aa8.91□□□□□ -0.98
PRDM1-206ENST00000481163 PPP1R1BQ9UD71 204 aaPredicted RBP8.91□□□□□ -0.98
PRDM1-206ENST00000481163 MYBBP1AQ9BQG0 1328 aaKnown RBP8.9□□□□□ -0.98
PRDM1-206ENST00000481163 LOC102724428A0A0B4J2F2 783 aa8.9□□□□□ -0.98
PRDM1-206ENST00000481163 GNAT3A8MTJ3 354 aa8.9□□□□□ -0.98
PRDM1-206ENST00000481163 PHF14O94880 888 aa8.9□□□□□ -0.98
PRDM1-206ENST00000481163 SIK1P57059 783 aa8.9□□□□□ -0.98
PRDM1-206ENST00000481163 GAS2L2Q8NHY3 880 aa8.9□□□□□ -0.98
PRDM1-206ENST00000481163 FCHSD2O94868 740 aa8.89□□□□□ -0.99
PRDM1-206ENST00000481163 TEFQ10587 303 aa8.89□□□□□ -0.99
PRDM1-206ENST00000481163 DCTN1Q14203 1278 aa8.89□□□□□ -0.99
PRDM1-206ENST00000481163 CCDC146Q8IYE0 955 aa8.89□□□□□ -0.99
PRDM1-206ENST00000481163 KLHL34Q8N239 644 aa8.89□□□□□ -0.99
PRDM1-206ENST00000481163 RTF1Q92541 710 aaKnown RBP8.89□□□□□ -0.99
PRDM1-206ENST00000481163 AKT1S1Q96B36 256 aa8.89□□□□□ -0.99
PRDM1-206ENST00000481163 AK7Q96M32 723 aa8.89□□□□□ -0.99
PRDM1-206ENST00000481163 PRKRIP1Q9H875 184 aaPredicted RBP8.89□□□□□ -0.99
PRDM1-206ENST00000481163 SPON1Q9HCB6 807 aa8.89□□□□□ -0.99
PRDM1-206ENST00000481163 SENP3-EIF4A1A0A087X0R7 540 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 ITPK1Q13572 414 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 WDR43Q15061 677 aaKnown RBP eCLIP8.88□□□□□ -0.99
PRDM1-206ENST00000481163 NEUROD2Q15784 382 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 MSL1Q68DK7 614 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 MCM10Q7L590 875 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 LINC00116Q8NCU8 138 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 IL17REQ8NFR9 667 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 SLC52A2Q9HAB3 445 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 CASZ1Q86V15 1759 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 C4BP0C0L5 1744 aa8.88□□□□□ -0.99
PRDM1-206ENST00000481163 PAPPAQ13219 1627 aa8.87□□□□□ -0.99
PRDM1-206ENST00000481163 MAP3K5Q99683 1374 aa8.87□□□□□ -0.99
PRDM1-206ENST00000481163 PNPLA7Q6ZV29 1317 aa8.87□□□□□ -0.99
PRDM1-206ENST00000481163 MAPK8IP3Q9UPT6 1336 aa8.87□□□□□ -0.99
PRDM1-206ENST00000481163 MYH14Q7Z406 1995 aaKnown RBP8.86□□□□□ -0.99
PRDM1-206ENST00000481163 UBR3Q6ZT12 1888 aa8.86□□□□□ -0.99
PRDM1-206ENST00000481163 GNPATO15228 680 aa8.86□□□□□ -0.99
PRDM1-206ENST00000481163 ANP32CO43423 234 aa8.86□□□□□ -0.99
PRDM1-206ENST00000481163 COL23A1Q86Y22 540 aaPredicted RBP8.86□□□□□ -0.99
PRDM1-206ENST00000481163 TTC5Q8N0Z6 440 aa8.86□□□□□ -0.99
PRDM1-206ENST00000481163 SLC4A9Q96Q91 983 aa8.86□□□□□ -0.99
PRDM1-206ENST00000481163 PNNQ9H307 717 aaKnown RBP8.86□□□□□ -0.99
PRDM1-206ENST00000481163 MIS18AQ9NYP9 233 aa8.86□□□□□ -0.99
PRDM1-206ENST00000481163 RRP7AQ9Y3A4 280 aaKnown RBP8.86□□□□□ -0.99
PRDM1-206ENST00000481163 QSER1Q2KHR3 1735 aa8.85□□□□□ -0.99
PRDM1-206ENST00000481163 LRP5O75197 1615 aa8.85□□□□□ -0.99
PRDM1-206ENST00000481163 BTBD11A6QL63 1104 aa8.85□□□□□ -0.99
PRDM1-206ENST00000481163 MTFR1LQ9H019 292 aa8.85□□□□□ -0.99
PRDM1-206ENST00000481163 PLEKHG2Q9H7P9 1386 aa8.85□□□□□ -0.99
PRDM1-206ENST00000481163 SIPA1L3O60292 1781 aaPredicted RBP8.84□□□□□ -0.99
PRDM1-206ENST00000481163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -0.99
PRDM1-206ENST00000481163 KCNQ3O43525 872 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 COL5A3P25940 1745 aaPredicted RBP8.84□□□□□ -0.99
PRDM1-206ENST00000481163 RIPK4P57078 832 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 NFE2L2Q16236 605 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 CCDC184Q52MB2 194 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 AMIGO3Q86WK7 504 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 DNAJC10Q8IXB1 793 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 ARXQ96QS3 562 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 PLEKHF1Q96S99 279 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 THUMPD2Q9BTF0 503 aaKnown RBP8.84□□□□□ -0.99
PRDM1-206ENST00000481163 ADAMTS8Q9UP79 889 aa8.84□□□□□ -0.99
PRDM1-206ENST00000481163 ZNF330Q9Y3S2 320 aaPredicted RBP8.84□□□□□ -0.99
PRDM1-206ENST00000481163 TJP1Q07157 1748 aa8.83□□□□□ -1
PRDM1-206ENST00000481163 POLD1P28340 1107 aa8.83□□□□□ -1
PRDM1-206ENST00000481163 CRKLP46109 303 aaKnown RBP8.83□□□□□ -1
PRDM1-206ENST00000481163 TRAPPC3LQ5T215 181 aa8.83□□□□□ -1
PRDM1-206ENST00000481163 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
PRDM1-206ENST00000481163 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
PRDM1-206ENST00000481163 ADAMTS7Q9UKP4 1686 aa8.82□□□□□ -1
PRDM1-206ENST00000481163 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
PRDM1-206ENST00000481163 CANXP27824 592 aaKnown RBP8.82□□□□□ -1
PRDM1-206ENST00000481163 RFC4P35249 363 aa8.82□□□□□ -1
PRDM1-206ENST00000481163 PTGER2P43116 358 aa8.82□□□□□ -1
PRDM1-206ENST00000481163 ZNF790Q6PG37 636 aa8.82□□□□□ -1
PRDM1-206ENST00000481163 FLAD1Q8NFF5 587 aa8.82□□□□□ -1
PRDM1-206ENST00000481163 SLC16A10Q8TF71 515 aa8.82□□□□□ -1
PRDM1-206ENST00000481163 ZNF496Q96IT1 587 aaPredicted RBP8.82□□□□□ -1
PRDM1-206ENST00000481163 NPM3O75607 178 aaKnown RBP8.81□□□□□ -1
PRDM1-206ENST00000481163 SSFA2P28290 1259 aa8.81□□□□□ -1
PRDM1-206ENST00000481163 TMPOP42166 694 aaKnown RBP8.81□□□□□ -1
PRDM1-206ENST00000481163 PIP4K2AP48426 406 aaPredicted RBP8.81□□□□□ -1
PRDM1-206ENST00000481163 TAF7Q15545 349 aaPredicted RBP8.81□□□□□ -1
PRDM1-206ENST00000481163 PELP1Q8IZL8 1130 aaKnown RBP8.81□□□□□ -1
PRDM1-206ENST00000481163 ARHGEF1Q92888 912 aaKnown RBP8.81□□□□□ -1
PRDM1-206ENST00000481163 RUNDC1Q96C34 613 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms