RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 USP16Q9Y5T5 823 aa14.99□□□□□ -0.01
RNF220-213ENST00000480686 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
RNF220-213ENST00000480686 ZCCHC17Q9NP64 241 aaKnown RBP14.98□□□□□ -0.01
RNF220-213ENST00000480686 POLA1P09884 1462 aaPredicted RBP14.98□□□□□ -0.01
RNF220-213ENST00000480686 HAP1P54257 671 aaPredicted RBP14.98□□□□□ -0.01
RNF220-213ENST00000480686 MLECQ14165 292 aa14.98□□□□□ -0.01
RNF220-213ENST00000480686 SF3A1Q15459 793 aaKnown RBP14.98□□□□□ -0.01
RNF220-213ENST00000480686 CACTINQ8WUQ7 758 aaKnown RBP14.98□□□□□ -0.01
RNF220-213ENST00000480686 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
RNF220-213ENST00000480686 PHACTR2O75167 634 aa14.98□□□□□ -0.01
RNF220-213ENST00000480686 F13A1P00488 732 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 SYT1P21579 422 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 CYP2C19P33261 490 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 ZNF75DP51815 510 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 AXDND1Q5T1B0 1012 aaPredicted RBP14.97□□□□□ -0.01
RNF220-213ENST00000480686 CCDC91Q7Z6B0 441 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 CBX8Q9HC52 389 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 RRP15Q9Y3B9 282 aaKnown RBP14.97□□□□□ -0.01
RNF220-213ENST00000480686 ANKRD65E5RJM6 399 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 INTS4Q96HW7 963 aaKnown RBP14.97□□□□□ -0.01
RNF220-213ENST00000480686 VPS18Q9P253 973 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 ZBTB7BO15156 539 aaPredicted RBP14.97□□□□□ -0.01
RNF220-213ENST00000480686 PDILTQ8N807 584 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 GIMAP7Q8NHV1 300 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 CARD14Q9BXL6 1004 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 SNAPC4Q5SXM2 1469 aa14.97□□□□□ -0.01
RNF220-213ENST00000480686 KINO60870 393 aaKnown RBP14.96□□□□□ -0.01
RNF220-213ENST00000480686 GJB2P29033 226 aa14.96□□□□□ -0.01
RNF220-213ENST00000480686 RTEL1-TNFRSF6BF6WH68 1400 aa14.96□□□□□ -0.01
RNF220-213ENST00000480686 TCOF1Q13428 1488 aaKnown RBP14.96□□□□□ -0.01
RNF220-213ENST00000480686 ASXL1Q8IXJ9 1541 aa14.96□□□□□ -0.01
RNF220-213ENST00000480686 IVLP07476 585 aa14.96□□□□□ -0.01
RNF220-213ENST00000480686 SLC20A2Q08357 652 aa14.96□□□□□ -0.01
RNF220-213ENST00000480686 CT47A1Q5JQC4 288 aaPredicted RBP14.96□□□□□ -0.01
RNF220-213ENST00000480686 FAM173BQ6P4H8 233 aa14.96□□□□□ -0.01
RNF220-213ENST00000480686 GNAI1P63096 354 aa14.96□□□□□ -0.02
RNF220-213ENST00000480686 ALDH1L2Q3SY69 923 aa14.96□□□□□ -0.02
RNF220-213ENST00000480686 ZNF526Q8TF50 670 aaPredicted RBP14.96□□□□□ -0.02
RNF220-213ENST00000480686 ZKSCAN1P17029 563 aaPredicted RBP14.95□□□□□ -0.02
RNF220-213ENST00000480686 PRKAR2BP31323 418 aa14.95□□□□□ -0.02
RNF220-213ENST00000480686 ANKRD20A12PQ8NF67 263 aa14.95□□□□□ -0.02
RNF220-213ENST00000480686 STK26Q9P289 416 aa14.95□□□□□ -0.02
RNF220-213ENST00000480686 KIAA0586Q9BVV6 1533 aa14.95□□□□□ -0.02
RNF220-213ENST00000480686 EIF3JO75822 258 aaKnown RBP14.95□□□□□ -0.02
RNF220-213ENST00000480686 USP8P40818 1118 aa14.95□□□□□ -0.02
RNF220-213ENST00000480686 NAT10Q9H0A0 1025 aaKnown RBP14.95□□□□□ -0.02
RNF220-213ENST00000480686 SEC31AO94979 1220 aaKnown RBP14.95□□□□□ -0.02
RNF220-213ENST00000480686 CLCN6P51797 869 aa14.95□□□□□ -0.02
RNF220-213ENST00000480686 STK3Q13188 491 aa14.95□□□□□ -0.02
RNF220-213ENST00000480686 SMC1AQ14683 1233 aaKnown RBP14.95□□□□□ -0.02
RNF220-213ENST00000480686 TPM1P09493 284 aa14.94□□□□□ -0.02
RNF220-213ENST00000480686 PNMA6AP0CW24 399 aaPredicted RBP14.94□□□□□ -0.02
RNF220-213ENST00000480686 CALRP27797 417 aaKnown RBP14.94□□□□□ -0.02
RNF220-213ENST00000480686 TMC6Q7Z403 805 aa14.94□□□□□ -0.02
RNF220-213ENST00000480686 CNPY4Q8N129 248 aa14.94□□□□□ -0.02
RNF220-213ENST00000480686 LIMCH1Q9UPQ0 1083 aa14.94□□□□□ -0.02
RNF220-213ENST00000480686 NSD3Q9BZ95 1437 aa14.94□□□□□ -0.02
RNF220-213ENST00000480686 ATAD2Q6PL18 1390 aa14.94□□□□□ -0.02
RNF220-213ENST00000480686 PDCP20941 246 aa14.93□□□□□ -0.02
RNF220-213ENST00000480686 RPAP2Q8IXW5 612 aaPredicted RBP14.93□□□□□ -0.02
RNF220-213ENST00000480686 ACBD3Q9H3P7 528 aa14.93□□□□□ -0.02
RNF220-213ENST00000480686 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
RNF220-213ENST00000480686 CEP57L1Q8IYX8 460 aa14.93□□□□□ -0.02
RNF220-213ENST00000480686 GRIN2BQ13224 1484 aa14.93□□□□□ -0.02
RNF220-213ENST00000480686 MAGI2Q86UL8 1455 aa14.93□□□□□ -0.02
RNF220-213ENST00000480686 EVCP57679 992 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 SMARCE1Q969G3 411 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 JAKMIP1Q96N16 626 aaKnown RBP14.92□□□□□ -0.02
RNF220-213ENST00000480686 CARD6Q9BX69 1037 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 CENPHQ9H3R5 247 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 DDX19AQ9NUU7 478 aaKnown RBP14.92□□□□□ -0.02
RNF220-213ENST00000480686 C9orf84Q5VXU9 1444 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 MAP2K2P36507 400 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 ARID5BQ14865 1188 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 NCAPGQ9BPX3 1015 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 RBM6P78332 1123 aaKnown RBP14.92□□□□□ -0.02
RNF220-213ENST00000480686 IL1RAPL2Q9NP60 686 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 PALD1Q9ULE6 856 aa14.92□□□□□ -0.02
RNF220-213ENST00000480686 CCP110O43303 1012 aa14.91□□□□□ -0.02
RNF220-213ENST00000480686 NUTM2DQ5VT03 806 aaPredicted RBP14.91□□□□□ -0.02
RNF220-213ENST00000480686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.91□□□□□ -0.02
RNF220-213ENST00000480686 ESYT1Q9BSJ8 1104 aa14.91□□□□□ -0.02
RNF220-213ENST00000480686 DCTPP1Q9H773 170 aa14.91□□□□□ -0.02
RNF220-213ENST00000480686 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.91□□□□□ -0.02
RNF220-213ENST00000480686 ST5P78524 1137 aa14.91□□□□□ -0.02
RNF220-213ENST00000480686 NECAB1Q8N987 351 aa14.91□□□□□ -0.02
RNF220-213ENST00000480686 CWC27Q6UX04 472 aaKnown RBP14.91□□□□□ -0.02
RNF220-213ENST00000480686 ZNF622Q969S3 477 aaKnown RBP eCLIP14.91□□□□□ -0.029e-6■■□□□ 12.8
RNF220-213ENST00000480686 SCAND2PQ9GZW5 306 aaPredicted RBP14.91□□□□□ -0.02
RNF220-213ENST00000480686 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
RNF220-213ENST00000480686 ERLIN1O75477 346 aa14.9□□□□□ -0.02
RNF220-213ENST00000480686 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
RNF220-213ENST00000480686 JAKMIP3Q5VZ66 844 aa14.9□□□□□ -0.02
RNF220-213ENST00000480686 EP400NLQ6ZTU2 488 aa14.9□□□□□ -0.02
RNF220-213ENST00000480686 PPM1EQ8WY54 764 aa14.9□□□□□ -0.02
RNF220-213ENST00000480686 PDRG1Q9NUG6 133 aa14.9□□□□□ -0.02
RNF220-213ENST00000480686 GEMIN8Q9NWZ8 242 aaKnown RBP14.9□□□□□ -0.02
RNF220-213ENST00000480686 POLR3AO14802 1390 aaPredicted RBP14.9□□□□□ -0.02
RNF220-213ENST00000480686 USP27XA6NNY8 438 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms