RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCM2-212ENST00000480382 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
CCM2-212ENST00000480382 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
CCM2-212ENST00000480382 SLC52A2Q9HAB3 445 aa16.04■□□□□ 0.16
CCM2-212ENST00000480382 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
CCM2-212ENST00000480382 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
CCM2-212ENST00000480382 C4BP0C0L5 1744 aa16.03■□□□□ 0.16
CCM2-212ENST00000480382 COL5A3P25940 1745 aaPredicted RBP16.03■□□□□ 0.16
CCM2-212ENST00000480382 MAPK8IP3Q9UPT6 1336 aa16.03■□□□□ 0.16
CCM2-212ENST00000480382 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
CCM2-212ENST00000480382 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
CCM2-212ENST00000480382 TJP1Q07157 1748 aa16.02■□□□□ 0.16
CCM2-212ENST00000480382 CICQ96RK0 1608 aaPredicted RBP16.02■□□□□ 0.16
CCM2-212ENST00000480382 NEFMP07197 916 aa16.02■□□□□ 0.16
CCM2-212ENST00000480382 ZNF827Q17R98 1081 aa16.02■□□□□ 0.16
CCM2-212ENST00000480382 STK32BQ9NY57 414 aa16.02■□□□□ 0.16
CCM2-212ENST00000480382 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
CCM2-212ENST00000480382 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
CCM2-212ENST00000480382 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
CCM2-212ENST00000480382 LOC102724428A0A0B4J2F2 783 aa16■□□□□ 0.15
CCM2-212ENST00000480382 SIK1P57059 783 aa16■□□□□ 0.15
CCM2-212ENST00000480382 SLC15A2Q16348 729 aa16■□□□□ 0.15
CCM2-212ENST00000480382 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
CCM2-212ENST00000480382 IL17REQ8NFR9 667 aa16■□□□□ 0.15
CCM2-212ENST00000480382 SRCAPQ6ZRS2 3230 aa15.99■□□□□ 0.15
CCM2-212ENST00000480382 MCM10Q7L590 875 aa15.99■□□□□ 0.15
CCM2-212ENST00000480382 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
CCM2-212ENST00000480382 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
CCM2-212ENST00000480382 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
CCM2-212ENST00000480382 LRP5O75197 1615 aa15.98■□□□□ 0.15
CCM2-212ENST00000480382 TEFQ10587 303 aa15.98■□□□□ 0.15
CCM2-212ENST00000480382 DCTN1Q14203 1278 aa15.98■□□□□ 0.15
CCM2-212ENST00000480382 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
CCM2-212ENST00000480382 RTF1Q92541 710 aaKnown RBP15.98■□□□□ 0.15
CCM2-212ENST00000480382 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
CCM2-212ENST00000480382 SLC39A6Q13433 755 aa15.97■□□□□ 0.15
CCM2-212ENST00000480382 ITPK1Q13572 414 aa15.97■□□□□ 0.15
CCM2-212ENST00000480382 SLC4A9Q96Q91 983 aa15.97■□□□□ 0.15
CCM2-212ENST00000480382 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
CCM2-212ENST00000480382 KDM3BQ7LBC6 1761 aa15.96■□□□□ 0.15
CCM2-212ENST00000480382 PTCD1O75127 700 aaKnown RBP15.96■□□□□ 0.15
CCM2-212ENST00000480382 ATP6V1AP38606 617 aa15.96■□□□□ 0.15
CCM2-212ENST00000480382 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.15
CCM2-212ENST00000480382 RUNDC1Q96C34 613 aa15.96■□□□□ 0.15
CCM2-212ENST00000480382 PDGFDQ9GZP0 370 aaPredicted RBP15.96■□□□□ 0.15
CCM2-212ENST00000480382 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
CCM2-212ENST00000480382 RRP7AQ9Y3A4 280 aaKnown RBP15.94■□□□□ 0.14
CCM2-212ENST00000480382 MYH14Q7Z406 1995 aaKnown RBP15.94■□□□□ 0.14
CCM2-212ENST00000480382 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
CCM2-212ENST00000480382 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
CCM2-212ENST00000480382 RIPK4P57078 832 aa15.93■□□□□ 0.14
CCM2-212ENST00000480382 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
CCM2-212ENST00000480382 TFCP2L1Q9NZI6 479 aa15.93■□□□□ 0.14
CCM2-212ENST00000480382 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
CCM2-212ENST00000480382 AK7Q96M32 723 aa15.92■□□□□ 0.14
CCM2-212ENST00000480382 C4AP0C0L4 1744 aa15.91■□□□□ 0.14
CCM2-212ENST00000480382 BTBD11A6QL63 1104 aa15.91■□□□□ 0.14
CCM2-212ENST00000480382 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
CCM2-212ENST00000480382 ZNF790Q6PG37 636 aa15.91■□□□□ 0.14
CCM2-212ENST00000480382 PNISRQ8TF01 805 aaKnown RBP15.91■□□□□ 0.14
CCM2-212ENST00000480382 LAMB4A4D0S4 1761 aa15.9■□□□□ 0.14
CCM2-212ENST00000480382 KCNQ3O43525 872 aa15.9■□□□□ 0.14
CCM2-212ENST00000480382 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
CCM2-212ENST00000480382 AMIGO3Q86WK7 504 aa15.9■□□□□ 0.14
CCM2-212ENST00000480382 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
CCM2-212ENST00000480382 GNPATO15228 680 aa15.89■□□□□ 0.13
CCM2-212ENST00000480382 PHF14O94880 888 aa15.89■□□□□ 0.13
CCM2-212ENST00000480382 ZBTB7AO95365 584 aa15.89■□□□□ 0.13
CCM2-212ENST00000480382 LMOD3Q0VAK6 560 aa15.89■□□□□ 0.13
CCM2-212ENST00000480382 SMIM5Q71RC9 77 aa15.89■□□□□ 0.13
CCM2-212ENST00000480382 DNAJC10Q8IXB1 793 aa15.89■□□□□ 0.13
CCM2-212ENST00000480382 ZNF496Q96IT1 587 aaPredicted RBP15.89■□□□□ 0.13
CCM2-212ENST00000480382 CNTNAP4Q9C0A0 1308 aa15.89■□□□□ 0.13
CCM2-212ENST00000480382 HEG1Q9ULI3 1381 aa15.88■□□□□ 0.13
CCM2-212ENST00000480382 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
CCM2-212ENST00000480382 APAF1O14727 1248 aa15.87■□□□□ 0.13
CCM2-212ENST00000480382 MSH5O43196 834 aa15.87■□□□□ 0.13
CCM2-212ENST00000480382 CRKLP46109 303 aaKnown RBP15.87■□□□□ 0.13
CCM2-212ENST00000480382 TAF7Q15545 349 aaPredicted RBP15.87■□□□□ 0.13
CCM2-212ENST00000480382 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
CCM2-212ENST00000480382 TRIM35Q9UPQ4 493 aa15.87■□□□□ 0.13
CCM2-212ENST00000480382 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.86■□□□□ 0.13
CCM2-212ENST00000480382 SSFA2P28290 1259 aa15.86■□□□□ 0.13
CCM2-212ENST00000480382 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
CCM2-212ENST00000480382 FMNL2Q96PY5 1086 aa15.86■□□□□ 0.13
CCM2-212ENST00000480382 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
CCM2-212ENST00000480382 RC3H1Q5TC82 1133 aaKnown RBP15.85■□□□□ 0.13
CCM2-212ENST00000480382 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
CCM2-212ENST00000480382 MTFR1LQ9H019 292 aa15.85■□□□□ 0.13
CCM2-212ENST00000480382 SPON1Q9HCB6 807 aa15.85■□□□□ 0.13
CCM2-212ENST00000480382 ATF5Q9Y2D1 282 aaPredicted RBP15.85■□□□□ 0.13
CCM2-212ENST00000480382 CYP19A1P11511 503 aaPredicted RBP15.84■□□□□ 0.13
CCM2-212ENST00000480382 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
CCM2-212ENST00000480382 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
CCM2-212ENST00000480382 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
CCM2-212ENST00000480382 INTS5Q6P9B9 1019 aaKnown RBP15.83■□□□□ 0.12
CCM2-212ENST00000480382 SLC16A10Q8TF71 515 aa15.83■□□□□ 0.12
CCM2-212ENST00000480382 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.12
CCM2-212ENST00000480382 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
CCM2-212ENST00000480382 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms