RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 PTF1AQ7RTS3 328 aa14.6□□□□□ -0.07
CLDN11-205ENST00000480067 MIS18AQ9NYP9 233 aa14.6□□□□□ -0.07
CLDN11-205ENST00000480067 KAT6BQ8WYB5 2073 aa14.59□□□□□ -0.07
CLDN11-205ENST00000480067 GNAI1P63096 354 aa14.59□□□□□ -0.07
CLDN11-205ENST00000480067 SF3B2Q13435 895 aaKnown RBP14.59□□□□□ -0.07
CLDN11-205ENST00000480067 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
CLDN11-205ENST00000480067 IFT57Q9NWB7 429 aa14.59□□□□□ -0.07
CLDN11-205ENST00000480067 ZNF521Q96K83 1311 aa14.58□□□□□ -0.08
CLDN11-205ENST00000480067 APBA3O96018 575 aa14.58□□□□□ -0.08
CLDN11-205ENST00000480067 GOLGA2Q08379 1002 aa14.58□□□□□ -0.08
CLDN11-205ENST00000480067 TTC5Q8N0Z6 440 aa14.58□□□□□ -0.08
CLDN11-205ENST00000480067 BABAM1Q9NWV8 329 aa14.58□□□□□ -0.08
CLDN11-205ENST00000480067 TSPYL4Q9UJ04 414 aa14.58□□□□□ -0.08
CLDN11-205ENST00000480067 ASAP1Q9ULH1 1129 aa14.58□□□□□ -0.08
CLDN11-205ENST00000480067 DLG5Q8TDM6 1919 aa14.58□□□□□ -0.08
CLDN11-205ENST00000480067 IL16Q14005 1332 aa14.57□□□□□ -0.08
CLDN11-205ENST00000480067 CHL1O00533 1208 aa14.57□□□□□ -0.08
CLDN11-205ENST00000480067 SLC39A6Q13433 755 aa14.57□□□□□ -0.08
CLDN11-205ENST00000480067 ZNF790Q6PG37 636 aa14.57□□□□□ -0.08
CLDN11-205ENST00000480067 CCDC125Q86Z20 511 aa14.57□□□□□ -0.08
CLDN11-205ENST00000480067 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
CLDN11-205ENST00000480067 ATG3Q9NT62 314 aa14.57□□□□□ -0.08
CLDN11-205ENST00000480067 ZBED9Q6R2W3 1325 aa14.57□□□□□ -0.08
CLDN11-205ENST00000480067 ADAMTS7Q9UKP4 1686 aa14.56□□□□□ -0.08
CLDN11-205ENST00000480067 SCN11AQ9UI33 1791 aa14.56□□□□□ -0.08
CLDN11-205ENST00000480067 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
CLDN11-205ENST00000480067 MRC1P22897 1456 aa14.56□□□□□ -0.08
CLDN11-205ENST00000480067 DOT1LQ8TEK3 1739 aa14.55□□□□□ -0.08
CLDN11-205ENST00000480067 E9PSI1 815 aa14.55□□□□□ -0.08
CLDN11-205ENST00000480067 PTCD1O75127 700 aaKnown RBP14.55□□□□□ -0.08
CLDN11-205ENST00000480067 MYH16Q9H6N6 1097 aa14.55□□□□□ -0.08
CLDN11-205ENST00000480067 TOGARAM1Q9Y4F4 1720 aa14.55□□□□□ -0.08
CLDN11-205ENST00000480067 KCNQ3O43525 872 aa14.54□□□□□ -0.08
CLDN11-205ENST00000480067 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
CLDN11-205ENST00000480067 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
CLDN11-205ENST00000480067 MBIPQ9NS73 344 aa14.54□□□□□ -0.08
CLDN11-205ENST00000480067 PALLDQ8WX93 1383 aa14.53□□□□□ -0.08
CLDN11-205ENST00000480067 PLSCR1O15162 318 aa14.53□□□□□ -0.08
CLDN11-205ENST00000480067 TSR2Q969E8 191 aaKnown RBP14.53□□□□□ -0.08
CLDN11-205ENST00000480067 CDCA7LQ96GN5 454 aa14.53□□□□□ -0.08
CLDN11-205ENST00000480067 FMNL2Q96PY5 1086 aa14.53□□□□□ -0.08
CLDN11-205ENST00000480067 NHSQ6T4R5 1651 aa14.53□□□□□ -0.08
CLDN11-205ENST00000480067 BAG6P46379 1132 aa14.52□□□□□ -0.08
CLDN11-205ENST00000480067 SLFN5Q08AF3 891 aa14.52□□□□□ -0.08
CLDN11-205ENST00000480067 UPF1Q92900 1129 aaKnown RBP eCLIP14.52□□□□□ -0.08
CLDN11-205ENST00000480067 ZNF496Q96IT1 587 aaPredicted RBP14.52□□□□□ -0.08
CLDN11-205ENST00000480067 LOC102724428A0A0B4J2F2 783 aa14.51□□□□□ -0.09
CLDN11-205ENST00000480067 SIK1P57059 783 aa14.51□□□□□ -0.09
CLDN11-205ENST00000480067 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
CLDN11-205ENST00000480067 ITGB4P16144 1822 aa14.51□□□□□ -0.09
CLDN11-205ENST00000480067 SBF2Q86WG5 1849 aa14.51□□□□□ -0.09
CLDN11-205ENST00000480067 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
CLDN11-205ENST00000480067 ATP6V1AP38606 617 aa14.5□□□□□ -0.09
CLDN11-205ENST00000480067 EN1Q05925 392 aaPredicted RBP14.5□□□□□ -0.09
CLDN11-205ENST00000480067 CCNL1Q9UK58 526 aaPredicted RBP14.5□□□□□ -0.09
CLDN11-205ENST00000480067 SNRPA1P09661 255 aaKnown RBP14.49□□□□□ -0.09
CLDN11-205ENST00000480067 TXNRD1Q16881 649 aa14.49□□□□□ -0.09
CLDN11-205ENST00000480067 SLC27A3Q5K4L6 730 aa14.49□□□□□ -0.09
CLDN11-205ENST00000480067 DEFB132Q7Z7B7 95 aa14.49□□□□□ -0.09
CLDN11-205ENST00000480067 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
CLDN11-205ENST00000480067 VIRMAQ69YN4 1812 aaKnown RBP14.48□□□□□ -0.09
CLDN11-205ENST00000480067 GIGYF1O75420 1035 aaPredicted RBP14.48□□□□□ -0.09
CLDN11-205ENST00000480067 HMGB2P26583 209 aaKnown RBP14.48□□□□□ -0.09
CLDN11-205ENST00000480067 TRMT2AQ8IZ69 625 aaKnown RBP14.48□□□□□ -0.09
CLDN11-205ENST00000480067 TEX13AQ9BXU3 409 aaPredicted RBP14.48□□□□□ -0.09
CLDN11-205ENST00000480067 HEG1Q9ULI3 1381 aa14.48□□□□□ -0.09
CLDN11-205ENST00000480067 BTAF1O14981 1849 aa14.48□□□□□ -0.09
CLDN11-205ENST00000480067 ELL2O00472 640 aaPredicted RBP14.47□□□□□ -0.09
CLDN11-205ENST00000480067 KCNQ4P56696 695 aa14.47□□□□□ -0.09
CLDN11-205ENST00000480067 EXOSC9Q06265 439 aaKnown RBP14.47□□□□□ -0.09
CLDN11-205ENST00000480067 PROM2Q8N271 834 aa14.47□□□□□ -0.09
CLDN11-205ENST00000480067 C8orf58Q8NAV2 365 aa14.47□□□□□ -0.09
CLDN11-205ENST00000480067 SLC4A9Q96Q91 983 aa14.47□□□□□ -0.09
CLDN11-205ENST00000480067 CAMKK2Q96RR4 588 aa14.47□□□□□ -0.09
CLDN11-205ENST00000480067 SIPA1L3O60292 1781 aaPredicted RBP14.47□□□□□ -0.09
CLDN11-205ENST00000480067 STARD3NLO95772 234 aa14.47□□□□□ -0.09
CLDN11-205ENST00000480067 EZH2Q15910 746 aaKnown RBP14.47□□□□□ -0.09
CLDN11-205ENST00000480067 KRT24Q2M2I5 525 aa14.47□□□□□ -0.09
CLDN11-205ENST00000480067 DUSP27Q5VZP5 1158 aa14.47□□□□□ -0.09
CLDN11-205ENST00000480067 DNAJC10Q8IXB1 793 aa14.46□□□□□ -0.09
CLDN11-205ENST00000480067 PRAMEF22A3QJZ6 481 aa14.45□□□□□ -0.1
CLDN11-205ENST00000480067 ITPK1Q13572 414 aa14.45□□□□□ -0.1
CLDN11-205ENST00000480067 TWISTNBQ3B726 338 aaPredicted RBP14.45□□□□□ -0.1
CLDN11-205ENST00000480067 KCPQ6ZWJ8 1503 aa14.45□□□□□ -0.1
CLDN11-205ENST00000480067 TSPYL6Q8N831 410 aa14.45□□□□□ -0.1
CLDN11-205ENST00000480067 CHMP4AQ9BY43 222 aa14.45□□□□□ -0.1
CLDN11-205ENST00000480067 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
CLDN11-205ENST00000480067 USP16Q9Y5T5 823 aa14.45□□□□□ -0.1
CLDN11-205ENST00000480067 HOXB7P09629 217 aa14.44□□□□□ -0.1
CLDN11-205ENST00000480067 EIF2S2P20042 333 aaKnown RBP14.44□□□□□ -0.1
CLDN11-205ENST00000480067 SOS1Q07889 1333 aaPredicted RBP14.43□□□□□ -0.1
CLDN11-205ENST00000480067 TNS1Q9HBL0 1735 aaKnown RBP14.43□□□□□ -0.1
CLDN11-205ENST00000480067 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
CLDN11-205ENST00000480067 KDM3BQ7LBC6 1761 aa14.43□□□□□ -0.1
CLDN11-205ENST00000480067 CYP19A1P11511 503 aaPredicted RBP14.43□□□□□ -0.1
CLDN11-205ENST00000480067 HDGFL1Q5TGJ6 251 aa14.43□□□□□ -0.1
CLDN11-205ENST00000480067 LINC00116Q8NCU8 138 aa14.43□□□□□ -0.1
CLDN11-205ENST00000480067 NECTIN2Q92692 538 aa14.43□□□□□ -0.1
CLDN11-205ENST00000480067 VAMP4O75379 141 aa14.42□□□□□ -0.1
CLDN11-205ENST00000480067 CRKLP46109 303 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms