RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 AATKQ6ZMQ8 1374 aa16.37■□□□□ 0.21
C9orf78-205ENST00000480023 CTIFO43310 598 aaKnown RBP16.37■□□□□ 0.21
C9orf78-205ENST00000480023 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
C9orf78-205ENST00000480023 PRAM1Q96QH2 718 aa16.37■□□□□ 0.21
C9orf78-205ENST00000480023 MEIS3Q99687 375 aa16.37■□□□□ 0.21
C9orf78-205ENST00000480023 PDCL2Q8N4E4 241 aa16.36■□□□□ 0.21
C9orf78-205ENST00000480023 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
C9orf78-205ENST00000480023 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
C9orf78-205ENST00000480023 GDPD2Q9HCC8 539 aa16.36■□□□□ 0.21
C9orf78-205ENST00000480023 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
C9orf78-205ENST00000480023 STK26Q9P289 416 aa16.36■□□□□ 0.21
C9orf78-205ENST00000480023 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
C9orf78-205ENST00000480023 UBE2HP62256 183 aa16.35■□□□□ 0.21
C9orf78-205ENST00000480023 C17orf53Q8N3J3 647 aaPredicted RBP16.35■□□□□ 0.21
C9orf78-205ENST00000480023 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
C9orf78-205ENST00000480023 SRCIN1Q9C0H9 1055 aa16.34■□□□□ 0.21
C9orf78-205ENST00000480023 APBB1O00213 710 aa16.34■□□□□ 0.21
C9orf78-205ENST00000480023 CHAF1AQ13111 956 aaPredicted RBP16.34■□□□□ 0.21
C9orf78-205ENST00000480023 GGT6Q6P531 493 aa16.34■□□□□ 0.21
C9orf78-205ENST00000480023 CHMLP26374 656 aa16.33■□□□□ 0.21
C9orf78-205ENST00000480023 FEZ1Q99689 392 aa16.33■□□□□ 0.21
C9orf78-205ENST00000480023 FAM83GA6ND36 823 aa16.33■□□□□ 0.2
C9orf78-205ENST00000480023 FBLN1P23142 703 aa16.33■□□□□ 0.2
C9orf78-205ENST00000480023 KRT24Q2M2I5 525 aa16.33■□□□□ 0.2
C9orf78-205ENST00000480023 MPNDQ8N594 471 aa16.33■□□□□ 0.2
C9orf78-205ENST00000480023 KCNF1Q9H3M0 494 aa16.33■□□□□ 0.2
C9orf78-205ENST00000480023 CHL1O00533 1208 aa16.32■□□□□ 0.2
C9orf78-205ENST00000480023 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
C9orf78-205ENST00000480023 SYCP1Q15431 976 aa16.32■□□□□ 0.2
C9orf78-205ENST00000480023 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
C9orf78-205ENST00000480023 EDC4Q6P2E9 1401 aaKnown RBP16.31■□□□□ 0.2
C9orf78-205ENST00000480023 TMEM131LA2VDJ0 1609 aa16.31■□□□□ 0.2
C9orf78-205ENST00000480023 ZBTB7CA1YPR0 619 aa16.31■□□□□ 0.2
C9orf78-205ENST00000480023 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
C9orf78-205ENST00000480023 ANO2Q9NQ90 1003 aa16.31■□□□□ 0.2
C9orf78-205ENST00000480023 MYO5BQ9ULV0 1848 aa16.31■□□□□ 0.2
C9orf78-205ENST00000480023 NRKQ7Z2Y5 1582 aa16.31■□□□□ 0.2
C9orf78-205ENST00000480023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.3■□□□□ 0.2
C9orf78-205ENST00000480023 STAP2Q9UGK3 403 aa16.3■□□□□ 0.2
C9orf78-205ENST00000480023 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
C9orf78-205ENST00000480023 DLC1Q96QB1 1528 aa16.3■□□□□ 0.2
C9orf78-205ENST00000480023 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
C9orf78-205ENST00000480023 HSPA4P34932 840 aa16.3■□□□□ 0.2
C9orf78-205ENST00000480023 IDI1Q13907 227 aa16.3■□□□□ 0.2
C9orf78-205ENST00000480023 SLC52A1Q9NWF4 448 aa16.3■□□□□ 0.2
C9orf78-205ENST00000480023 PYCARDQ9ULZ3 195 aa16.3■□□□□ 0.2
C9orf78-205ENST00000480023 AOX1Q06278 1338 aa16.29■□□□□ 0.2
C9orf78-205ENST00000480023 GOLGA6L6A8MZA4 724 aa16.29■□□□□ 0.2
C9orf78-205ENST00000480023 DCTN1Q14203 1278 aa16.29■□□□□ 0.2
C9orf78-205ENST00000480023 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
C9orf78-205ENST00000480023 UPF3BQ9BZI7 483 aaKnown RBP16.29■□□□□ 0.2
C9orf78-205ENST00000480023 AP5Z1O43299 807 aa16.28■□□□□ 0.2
C9orf78-205ENST00000480023 CCT4P50991 539 aaKnown RBP16.28■□□□□ 0.2
C9orf78-205ENST00000480023 FOXD4L6Q3SYB3 417 aaPredicted RBP16.28■□□□□ 0.2
C9orf78-205ENST00000480023 FOXD4L3Q6VB84 417 aaPredicted RBP16.28■□□□□ 0.2
C9orf78-205ENST00000480023 NOL8Q76FK4 1167 aaKnown RBP16.28■□□□□ 0.2
C9orf78-205ENST00000480023 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.28■□□□□ 0.2
C9orf78-205ENST00000480023 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
C9orf78-205ENST00000480023 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
C9orf78-205ENST00000480023 LRRCC1Q9C099 1032 aa16.28■□□□□ 0.2
C9orf78-205ENST00000480023 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
C9orf78-205ENST00000480023 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.2
C9orf78-205ENST00000480023 OGFRQ9NZT2 677 aa16.27■□□□□ 0.2
C9orf78-205ENST00000480023 ARHGEF10O15013 1369 aa16.27■□□□□ 0.19
C9orf78-205ENST00000480023 STX6O43752 255 aa16.27■□□□□ 0.19
C9orf78-205ENST00000480023 F13A1P00488 732 aa16.27■□□□□ 0.19
C9orf78-205ENST00000480023 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
C9orf78-205ENST00000480023 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
C9orf78-205ENST00000480023 TTC14Q96N46 770 aa16.26■□□□□ 0.19
C9orf78-205ENST00000480023 GNAI2P04899 355 aa16.25■□□□□ 0.19
C9orf78-205ENST00000480023 SYT1P21579 422 aa16.25■□□□□ 0.19
C9orf78-205ENST00000480023 TSHZ3Q63HK5 1081 aa16.25■□□□□ 0.19
C9orf78-205ENST00000480023 EXOC6BQ9Y2D4 811 aa16.25■□□□□ 0.19
C9orf78-205ENST00000480023 GABPB1Q06547 395 aaPredicted RBP16.25■□□□□ 0.19
C9orf78-205ENST00000480023 NCBP1Q09161 790 aaKnown RBP16.25■□□□□ 0.19
C9orf78-205ENST00000480023 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.25■□□□□ 0.19
C9orf78-205ENST00000480023 GIMAP6Q6P9H5 292 aa16.24■□□□□ 0.19
C9orf78-205ENST00000480023 RAD50Q92878 1312 aa16.24■□□□□ 0.19
C9orf78-205ENST00000480023 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
C9orf78-205ENST00000480023 RILPL2Q969X0 211 aa16.24■□□□□ 0.19
C9orf78-205ENST00000480023 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
C9orf78-205ENST00000480023 CRB1P82279 1406 aa16.23■□□□□ 0.19
C9orf78-205ENST00000480023 TRIM6-TRIM34B2RNG4 842 aa16.23■□□□□ 0.19
C9orf78-205ENST00000480023 CCDC192P0DO97 292 aa16.23■□□□□ 0.19
C9orf78-205ENST00000480023 FGD1P98174 961 aa16.23■□□□□ 0.19
C9orf78-205ENST00000480023 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
C9orf78-205ENST00000480023 SMTNL1A8MU46 457 aa16.22■□□□□ 0.19
C9orf78-205ENST00000480023 FAM200AQ8TCP9 573 aa16.22■□□□□ 0.19
C9orf78-205ENST00000480023 LIMCH1Q9UPQ0 1083 aa16.22■□□□□ 0.19
C9orf78-205ENST00000480023 N4BP2Q86UW6 1770 aaPredicted RBP16.22■□□□□ 0.19
C9orf78-205ENST00000480023 FIBPO43427 364 aa16.22■□□□□ 0.19
C9orf78-205ENST00000480023 NME9Q86XW9 330 aa16.22■□□□□ 0.19
C9orf78-205ENST00000480023 UNC5CLQ8IV45 518 aa16.22■□□□□ 0.19
C9orf78-205ENST00000480023 IL25Q9H293 177 aa16.22■□□□□ 0.19
C9orf78-205ENST00000480023 ATP8B2P98198 1209 aa16.21■□□□□ 0.19
C9orf78-205ENST00000480023 AK2P54819 239 aa16.21■□□□□ 0.18
C9orf78-205ENST00000480023 PLCB2Q00722 1185 aa16.21■□□□□ 0.18
C9orf78-205ENST00000480023 DDX41Q9UJV9 622 aaKnown RBP16.21■□□□□ 0.18
C9orf78-205ENST00000480023 SNX14Q9Y5W7 946 aa16.21■□□□□ 0.18
C9orf78-205ENST00000480023 C3P01024 1663 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms