RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 AKAP4Q5JQC9 854 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 CEP170BQ9Y4F5 1589 aaPredicted RBP7.32□□□□□ -1.24
CPS1-207ENST00000479988 RAD21O60216 631 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 LMOD1P29536 600 aaPredicted RBP7.32□□□□□ -1.24
CPS1-207ENST00000479988 TPTE2Q6XPS3 522 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 BCL2L13Q9BXK5 485 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 BEGAINQ9BUH8 593 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 CARD10Q9BWT7 1032 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 NYXQ9GZU5 481 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 ANKIB1Q9P2G1 1089 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 PLEKHH1Q9ULM0 1364 aa7.32□□□□□ -1.24
CPS1-207ENST00000479988 NRXN1Q9ULB1 1477 aa7.31□□□□□ -1.24
CPS1-207ENST00000479988 CLTCQ00610 1675 aaKnown RBP7.31□□□□□ -1.24
CPS1-207ENST00000479988 TWISTNBQ3B726 338 aaPredicted RBP7.31□□□□□ -1.24
CPS1-207ENST00000479988 CCDC125Q86Z20 511 aa7.31□□□□□ -1.24
CPS1-207ENST00000479988 FAM135BQ49AJ0 1406 aa7.31□□□□□ -1.24
CPS1-207ENST00000479988 RARSP54136 660 aaKnown RBP7.31□□□□□ -1.24
CPS1-207ENST00000479988 NEUROD6Q96NK8 337 aa7.31□□□□□ -1.24
CPS1-207ENST00000479988 EDC4Q6P2E9 1401 aaKnown RBP7.31□□□□□ -1.24
CPS1-207ENST00000479988 IQGAP1P46940 1657 aa7.31□□□□□ -1.24
CPS1-207ENST00000479988 BCAR3O75815 825 aa7.31□□□□□ -1.24
CPS1-207ENST00000479988 SPON1Q9HCB6 807 aa7.31□□□□□ -1.24
CPS1-207ENST00000479988 MCCP23508 829 aa7.3□□□□□ -1.24
CPS1-207ENST00000479988 NLRP3Q96P20 1036 aa7.3□□□□□ -1.24
CPS1-207ENST00000479988 ZNF521Q96K83 1311 aa7.3□□□□□ -1.24
CPS1-207ENST00000479988 CPS1P31327 1500 aa7.3□□□□□ -1.24
CPS1-207ENST00000479988 GNAI3P08754 354 aa7.3□□□□□ -1.24
CPS1-207ENST00000479988 IFIT2P09913 472 aaKnown RBP7.3□□□□□ -1.24
CPS1-207ENST00000479988 ALDH1L2Q3SY69 923 aa7.3□□□□□ -1.24
CPS1-207ENST00000479988 GPTP24298 496 aa7.3□□□□□ -1.24
CPS1-207ENST00000479988 MCM10Q7L590 875 aa7.3□□□□□ -1.24
CPS1-207ENST00000479988 CDC5LQ99459 802 aaKnown RBP7.3□□□□□ -1.24
CPS1-207ENST00000479988 PPRC1Q5VV67 1664 aaKnown RBP7.3□□□□□ -1.24
CPS1-207ENST00000479988 TRMT2AQ8IZ69 625 aaKnown RBP7.3□□□□□ -1.24
CPS1-207ENST00000479988 FER1L4A9Z1Z3 1794 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
CPS1-207ENST00000479988 ZBTB3Q9H5J0 574 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 WDR17Q8IZU2 1322 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 SBNO1A3KN83 1393 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 ANKARQ7Z5J8 1434 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 H0YIN7 160 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 SLC4A2P04920 1241 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 SRCIN1Q9C0H9 1055 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 DBF4Q9UBU7 674 aaPredicted RBP7.29□□□□□ -1.24
CPS1-207ENST00000479988 TBC1D2BQ9UPU7 963 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 ABCA6Q8N139 1617 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 A0A1W2PP64 1363 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 ZC3H13Q5T200 1668 aaKnown RBP7.29□□□□□ -1.24
CPS1-207ENST00000479988 NF2P35240 595 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 GRM1Q13255 1194 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 MVPQ14764 893 aaKnown RBP7.29□□□□□ -1.24
CPS1-207ENST00000479988 NLGN1Q8N2Q7 840 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 PANK1Q8TE04 598 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 NIP7Q9Y221 180 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPS1-207ENST00000479988 BCS1LQ9Y276 419 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 TRIM6-TRIM34B2RNG4 842 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 FAM182BQ5T319 152 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 DPY19L2Q6NUT2 758 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 ATF7IPQ6VMQ6 1270 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 HYPKQ9NX55 129 aa7.29□□□□□ -1.24
CPS1-207ENST00000479988 CNBD1Q8NA66 436 aa7.28□□□□□ -1.24
CPS1-207ENST00000479988 EIF4A2Q14240 407 aaKnown RBP7.28□□□□□ -1.24
CPS1-207ENST00000479988 VPS72Q15906 364 aa7.28□□□□□ -1.24
CPS1-207ENST00000479988 DZIP3Q86Y13 1208 aaKnown RBP7.28□□□□□ -1.24
CPS1-207ENST00000479988 ZSCAN29Q8IWY8 852 aaPredicted RBP7.28□□□□□ -1.24
CPS1-207ENST00000479988 APPP05067 770 aa7.28□□□□□ -1.24
CPS1-207ENST00000479988 NFATC2IPQ8NCF5 419 aa7.28□□□□□ -1.24
CPS1-207ENST00000479988 TNS3Q68CZ2 1445 aa7.28□□□□□ -1.24
CPS1-207ENST00000479988 NCOA3Q9Y6Q9 1424 aa7.28□□□□□ -1.24
CPS1-207ENST00000479988 MYO1BO43795 1136 aa7.27□□□□□ -1.24
CPS1-207ENST00000479988 EYA1Q99502 592 aa7.27□□□□□ -1.24
CPS1-207ENST00000479988 ATF5Q9Y2D1 282 aaPredicted RBP7.27□□□□□ -1.24
CPS1-207ENST00000479988 OGFOD1Q8N543 542 aa7.27□□□□□ -1.25
CPS1-207ENST00000479988 IFT57Q9NWB7 429 aa7.27□□□□□ -1.25
CPS1-207ENST00000479988 SAMD1Q6SPF0 538 aaPredicted RBP7.27□□□□□ -1.25
CPS1-207ENST00000479988 CEP126Q9P2H0 1117 aa7.27□□□□□ -1.25
CPS1-207ENST00000479988 CAVIN4Q5BKX8 364 aa7.27□□□□□ -1.25
CPS1-207ENST00000479988 HDAC9Q9UKV0 1011 aa7.27□□□□□ -1.25
CPS1-207ENST00000479988 FBLN1P23142 703 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 C20orf194Q5TEA3 1177 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 EIF6P56537 245 aaKnown RBP7.26□□□□□ -1.25
CPS1-207ENST00000479988 SLC39A6Q13433 755 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 ARHGEF25Q86VW2 580 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 CCDC85AQ96PX6 553 aaPredicted RBP7.26□□□□□ -1.25
CPS1-207ENST00000479988 EYA3Q99504 573 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 POLKQ9UBT6 870 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 PSDA5PKW4 1024 aaPredicted RBP7.26□□□□□ -1.25
CPS1-207ENST00000479988 HTATSF1O43719 755 aaKnown RBP7.26□□□□□ -1.25
CPS1-207ENST00000479988 IFIT1P09914 478 aaKnown RBP7.26□□□□□ -1.25
CPS1-207ENST00000479988 EN1Q05925 392 aaPredicted RBP7.26□□□□□ -1.25
CPS1-207ENST00000479988 CCDC158Q5M9N0 1113 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 MSL1Q68DK7 614 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 PKNOX2Q96KN3 472 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 MIS18AQ9NYP9 233 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 MROH1Q8NDA8 1641 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 C1orf167Q5SNV9 1468 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 FAM83GA6ND36 823 aa7.26□□□□□ -1.25
CPS1-207ENST00000479988 IFIT5Q13325 482 aaKnown RBP7.25□□□□□ -1.25
CPS1-207ENST00000479988 DCTN1Q14203 1278 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms