RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 NGLY1Q96IV0 654 aa14.24□□□□□ -0.13
RAPGEF3-209ENST00000479866 MED14O60244 1454 aa14.24□□□□□ -0.13
RAPGEF3-209ENST00000479866 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF3-209ENST00000479866 OVOS2A0A0J9YW53 1432 aa14.23□□□□□ -0.13
RAPGEF3-209ENST00000479866 OVOS2Q6IE36 1432 aa14.23□□□□□ -0.13
RAPGEF3-209ENST00000479866 HMMRO75330 724 aa14.23□□□□□ -0.13
RAPGEF3-209ENST00000479866 FLIIQ13045 1269 aa14.23□□□□□ -0.13
RAPGEF3-209ENST00000479866 RRP9O43818 475 aaKnown RBP14.23□□□□□ -0.13
RAPGEF3-209ENST00000479866 MFAP1P55081 439 aaKnown RBP14.23□□□□□ -0.13
RAPGEF3-209ENST00000479866 ARHGEF10O15013 1369 aa14.22□□□□□ -0.13
RAPGEF3-209ENST00000479866 ZCRB1Q8TBF4 217 aaKnown RBP14.22□□□□□ -0.13
RAPGEF3-209ENST00000479866 UBTFL1P0CB47 393 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF3-209ENST00000479866 CHPF2Q9P2E5 772 aa14.22□□□□□ -0.13
RAPGEF3-209ENST00000479866 RNMTO43148 476 aaKnown RBP14.21□□□□□ -0.13
RAPGEF3-209ENST00000479866 NEXNQ0ZGT2 675 aa14.21□□□□□ -0.13
RAPGEF3-209ENST00000479866 LARP1Q6PKG0 1096 aaKnown RBP14.21□□□□□ -0.13
RAPGEF3-209ENST00000479866 VGLL3A8MV65 326 aa14.21□□□□□ -0.13
RAPGEF3-209ENST00000479866 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
RAPGEF3-209ENST00000479866 C8orf37Q96NL8 207 aa14.21□□□□□ -0.13
RAPGEF3-209ENST00000479866 ERBB3P21860 1342 aa14.21□□□□□ -0.14
RAPGEF3-209ENST00000479866 SPATA31A3Q5VYP0 1347 aa14.21□□□□□ -0.14
RAPGEF3-209ENST00000479866 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.14
RAPGEF3-209ENST00000479866 PHAXQ9H814 394 aaKnown RBP14.21□□□□□ -0.14
RAPGEF3-209ENST00000479866 USP31Q70CQ4 1352 aa14.2□□□□□ -0.14
RAPGEF3-209ENST00000479866 NPHP1O15259 732 aa14.2□□□□□ -0.14
RAPGEF3-209ENST00000479866 DDX58O95786 925 aaKnown RBP14.2□□□□□ -0.14
RAPGEF3-209ENST00000479866 LRRC7Q96NW7 1537 aa14.2□□□□□ -0.14
RAPGEF3-209ENST00000479866 MEIS3Q99687 375 aa14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 PI4KAP2A4QPH2 592 aa14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 PI4KAP1Q8N8J0 262 aa14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 MAP2P11137 1827 aaKnown RBP14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 HSP90AB1P08238 724 aaKnown RBP14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 SPRYD3Q8NCJ5 442 aa14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 ANP32BQ92688 251 aaKnown RBP14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 JARID2Q92833 1246 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
RAPGEF3-209ENST00000479866 IL2RBP14784 551 aa14.18□□□□□ -0.14
RAPGEF3-209ENST00000479866 TRIM6-TRIM34B2RNG4 842 aa14.18□□□□□ -0.14
RAPGEF3-209ENST00000479866 EXOC5O00471 708 aa14.18□□□□□ -0.14
RAPGEF3-209ENST00000479866 ACSBG1Q96GR2 724 aa14.18□□□□□ -0.14
RAPGEF3-209ENST00000479866 PRDM10Q9NQV6 1147 aa14.18□□□□□ -0.14
RAPGEF3-209ENST00000479866 TMOD3Q9NYL9 352 aa14.17□□□□□ -0.14
RAPGEF3-209ENST00000479866 HTATSF1O43719 755 aaKnown RBP14.17□□□□□ -0.14
RAPGEF3-209ENST00000479866 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
RAPGEF3-209ENST00000479866 ZHX1Q9UKY1 873 aaPredicted RBP14.17□□□□□ -0.14
RAPGEF3-209ENST00000479866 GNAI2P04899 355 aa14.16□□□□□ -0.14
RAPGEF3-209ENST00000479866 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-209ENST00000479866 DNTTIP2Q5QJE6 756 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-209ENST00000479866 PRAMEF22A3QJZ6 481 aa14.15□□□□□ -0.14
RAPGEF3-209ENST00000479866 SMARCA5O60264 1052 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-209ENST00000479866 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
RAPGEF3-209ENST00000479866 GNAI3P08754 354 aa14.15□□□□□ -0.14
RAPGEF3-209ENST00000479866 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-209ENST00000479866 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-209ENST00000479866 ZNF853P0CG23 659 aa14.15□□□□□ -0.14
RAPGEF3-209ENST00000479866 RILPL2Q969X0 211 aa14.14□□□□□ -0.15
RAPGEF3-209ENST00000479866 ITSN1Q15811 1721 aa14.14□□□□□ -0.15
RAPGEF3-209ENST00000479866 FMNL2Q96PY5 1086 aa14.14□□□□□ -0.15
RAPGEF3-209ENST00000479866 LRRFIP2Q9Y608 721 aaKnown RBP14.14□□□□□ -0.15
RAPGEF3-209ENST00000479866 ADAMTSL3P82987 1691 aa14.14□□□□□ -0.15
RAPGEF3-209ENST00000479866 ATP5J2-PTCD1G3V325 749 aa14.13□□□□□ -0.15
RAPGEF3-209ENST00000479866 CCDC85AQ96PX6 553 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF3-209ENST00000479866 MAP3K2Q9Y2U5 619 aa14.13□□□□□ -0.15
RAPGEF3-209ENST00000479866 DNAAF4Q8WXU2 420 aa14.13□□□□□ -0.15
RAPGEF3-209ENST00000479866 SIL1Q9H173 461 aa14.13□□□□□ -0.15
RAPGEF3-209ENST00000479866 IL1RAPL2Q9NP60 686 aa14.13□□□□□ -0.15
RAPGEF3-209ENST00000479866 ZNF790Q6PG37 636 aa14.13□□□□□ -0.15
RAPGEF3-209ENST00000479866 ZBTB3Q9H5J0 574 aa14.13□□□□□ -0.15
RAPGEF3-209ENST00000479866 ZNF496Q96IT1 587 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 SRGAP3O43295 1099 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 PHKG2P15735 406 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 CASC1Q6TDU7 716 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 DCAF5Q96JK2 942 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 COL3A1P02461 1466 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 EIF4A1P60842 406 aaKnown RBP14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 TPRNQ4KMQ1 711 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 COPS6Q7L5N1 327 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 MYD88Q99836 296 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 ZBTB40Q9NUA8 1239 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 PTPRCP08575 1304 aa14.12□□□□□ -0.15
RAPGEF3-209ENST00000479866 CNPY4Q8N129 248 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 ARHGAP45Q92619 1136 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 USP19O94966 1318 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 CHD1LQ86WJ1 897 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 MST1RQ04912 1400 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 RTL1A6NKG5 1358 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 XAGE3Q8WTP9 111 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 BACH2Q9BYV9 841 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 TNS3Q68CZ2 1445 aa14.11□□□□□ -0.15
RAPGEF3-209ENST00000479866 GSE1Q14687 1217 aa14.1□□□□□ -0.15
RAPGEF3-209ENST00000479866 ZBTB7BO15156 539 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF3-209ENST00000479866 SNRPA1P09661 255 aaKnown RBP14.1□□□□□ -0.15
RAPGEF3-209ENST00000479866 CWF19L2Q2TBE0 894 aaKnown RBP14.1□□□□□ -0.15
RAPGEF3-209ENST00000479866 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
RAPGEF3-209ENST00000479866 RGPD8O14715 1765 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF3-209ENST00000479866 DDB1Q16531 1140 aa14.09□□□□□ -0.15
RAPGEF3-209ENST00000479866 CYP27B1O15528 508 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms