RNA–Protein interactions for RNA: ENST00000479488.1

GSE1-209, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-209ENST00000479488 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
GSE1-209ENST00000479488 PSDA5PKW4 1024 aaPredicted RBP20.39■□□□□ 0.85
GSE1-209ENST00000479488 KCNQ4P56696 695 aa20.39■□□□□ 0.85
GSE1-209ENST00000479488 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
GSE1-209ENST00000479488 STK32BQ9NY57 414 aa20.39■□□□□ 0.85
GSE1-209ENST00000479488 R3HDM1Q15032 1099 aaKnown RBP20.38■□□□□ 0.85
GSE1-209ENST00000479488 DIEXFQ68CQ4 756 aaKnown RBP20.38■□□□□ 0.85
GSE1-209ENST00000479488 MCM10Q7L590 875 aa20.38■□□□□ 0.85
GSE1-209ENST00000479488 PROM2Q8N271 834 aa20.38■□□□□ 0.85
GSE1-209ENST00000479488 RUNDC1Q96C34 613 aa20.38■□□□□ 0.85
GSE1-209ENST00000479488 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
GSE1-209ENST00000479488 C5P01031 1676 aa20.36■□□□□ 0.85
GSE1-209ENST00000479488 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
GSE1-209ENST00000479488 NEUROD2Q15784 382 aa20.36■□□□□ 0.85
GSE1-209ENST00000479488 TTC5Q8N0Z6 440 aa20.36■□□□□ 0.85
GSE1-209ENST00000479488 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
GSE1-209ENST00000479488 RRP7AQ9Y3A4 280 aaKnown RBP20.36■□□□□ 0.85
GSE1-209ENST00000479488 LOC102724428A0A0B4J2F2 783 aa20.35■□□□□ 0.85
GSE1-209ENST00000479488 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
GSE1-209ENST00000479488 SIK1P57059 783 aa20.35■□□□□ 0.85
GSE1-209ENST00000479488 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
GSE1-209ENST00000479488 ANO8Q9HCE9 1232 aaPredicted RBP20.35■□□□□ 0.85
GSE1-209ENST00000479488 LRRC4BQ9NT99 713 aa20.35■□□□□ 0.85
GSE1-209ENST00000479488 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
GSE1-209ENST00000479488 HMGB2P26583 209 aaKnown RBP20.34■□□□□ 0.85
GSE1-209ENST00000479488 ATP6V1AP38606 617 aa20.34■□□□□ 0.85
GSE1-209ENST00000479488 RIPK4P57078 832 aa20.34■□□□□ 0.85
GSE1-209ENST00000479488 PAPPAQ13219 1627 aa20.34■□□□□ 0.85
GSE1-209ENST00000479488 TAF1LQ8IZX4 1826 aa20.33■□□□□ 0.85
GSE1-209ENST00000479488 TMPOP42166 694 aaKnown RBP20.33■□□□□ 0.85
GSE1-209ENST00000479488 SLC39A6Q13433 755 aa20.33■□□□□ 0.85
GSE1-209ENST00000479488 SIPA1L3O60292 1781 aaPredicted RBP20.33■□□□□ 0.84
GSE1-209ENST00000479488 CEMIPQ8WUJ3 1361 aa20.33■□□□□ 0.84
GSE1-209ENST00000479488 FAM9BQ8IZU0 186 aa20.32■□□□□ 0.84
GSE1-209ENST00000479488 BTBD11A6QL63 1104 aa20.31■□□□□ 0.84
GSE1-209ENST00000479488 SLC15A2Q16348 729 aa20.31■□□□□ 0.84
GSE1-209ENST00000479488 PNISRQ8TF01 805 aaKnown RBP20.31■□□□□ 0.84
GSE1-209ENST00000479488 AK7Q96M32 723 aa20.3■□□□□ 0.84
GSE1-209ENST00000479488 THUMPD2Q9BTF0 503 aaKnown RBP20.3■□□□□ 0.84
GSE1-209ENST00000479488 TFCP2L1Q9NZI6 479 aa20.3■□□□□ 0.84
GSE1-209ENST00000479488 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
GSE1-209ENST00000479488 APAF1O14727 1248 aa20.29■□□□□ 0.84
GSE1-209ENST00000479488 ZNF827Q17R98 1081 aa20.29■□□□□ 0.84
GSE1-209ENST00000479488 UBR2Q8IWV8 1755 aa20.27■□□□□ 0.84
GSE1-209ENST00000479488 TUBGCP6Q96RT7 1819 aa20.27■□□□□ 0.84
GSE1-209ENST00000479488 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
GSE1-209ENST00000479488 MSH5O43196 834 aa20.26■□□□□ 0.83
GSE1-209ENST00000479488 ITPK1Q13572 414 aa20.26■□□□□ 0.83
GSE1-209ENST00000479488 TAF7Q15545 349 aaPredicted RBP20.26■□□□□ 0.83
GSE1-209ENST00000479488 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
GSE1-209ENST00000479488 LINC00116Q8NCU8 138 aa20.26■□□□□ 0.83
GSE1-209ENST00000479488 KCPQ6ZWJ8 1503 aa20.26■□□□□ 0.83
GSE1-209ENST00000479488 TJP1Q07157 1748 aa20.25■□□□□ 0.83
GSE1-209ENST00000479488 SENP3-EIF4A1A0A087X0R7 540 aa20.25■□□□□ 0.83
GSE1-209ENST00000479488 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
GSE1-209ENST00000479488 COL5A3P25940 1745 aaPredicted RBP20.24■□□□□ 0.83
GSE1-209ENST00000479488 GNPATO15228 680 aa20.24■□□□□ 0.83
GSE1-209ENST00000479488 PHF14O94880 888 aa20.24■□□□□ 0.83
GSE1-209ENST00000479488 FMNL2Q96PY5 1086 aa20.24■□□□□ 0.83
GSE1-209ENST00000479488 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
GSE1-209ENST00000479488 QSER1Q2KHR3 1735 aa20.23■□□□□ 0.83
GSE1-209ENST00000479488 SLC4A9Q96Q91 983 aa20.23■□□□□ 0.83
GSE1-209ENST00000479488 LAS1LQ9Y4W2 734 aaKnown RBP20.23■□□□□ 0.83
GSE1-209ENST00000479488 KDM3BQ7LBC6 1761 aa20.22■□□□□ 0.83
GSE1-209ENST00000479488 DNAJC10Q8IXB1 793 aa20.22■□□□□ 0.83
GSE1-209ENST00000479488 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
GSE1-209ENST00000479488 MIS18AQ9NYP9 233 aa20.22■□□□□ 0.83
GSE1-209ENST00000479488 TSPYL4Q9UJ04 414 aa20.22■□□□□ 0.83
GSE1-209ENST00000479488 HEG1Q9ULI3 1381 aa20.21■□□□□ 0.83
GSE1-209ENST00000479488 CICQ96RK0 1608 aaPredicted RBP20.21■□□□□ 0.83
GSE1-209ENST00000479488 KCNQ3O43525 872 aa20.21■□□□□ 0.83
GSE1-209ENST00000479488 CASZ1Q86V15 1759 aa20.21■□□□□ 0.83
GSE1-209ENST00000479488 UBR3Q6ZT12 1888 aa20.2■□□□□ 0.82
GSE1-209ENST00000479488 MIER1Q8N108 512 aa20.2■□□□□ 0.82
GSE1-209ENST00000479488 TRIM35Q9UPQ4 493 aa20.2■□□□□ 0.82
GSE1-209ENST00000479488 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
GSE1-209ENST00000479488 CNTNAP4Q9C0A0 1308 aa20.2■□□□□ 0.82
GSE1-209ENST00000479488 CRKLP46109 303 aaKnown RBP20.19■□□□□ 0.82
GSE1-209ENST00000479488 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
GSE1-209ENST00000479488 VSIG10Q8N0Z9 540 aa20.19■□□□□ 0.82
GSE1-209ENST00000479488 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
GSE1-209ENST00000479488 RTCBQ9Y3I0 505 aaKnown RBP20.19■□□□□ 0.82
GSE1-209ENST00000479488 SALL2Q9Y467 1007 aaPredicted RBP20.19■□□□□ 0.82
GSE1-209ENST00000479488 ZBTB7AO95365 584 aa20.18■□□□□ 0.82
GSE1-209ENST00000479488 STARD3NLO95772 234 aa20.18■□□□□ 0.82
GSE1-209ENST00000479488 PDGFDQ9GZP0 370 aaPredicted RBP20.18■□□□□ 0.82
GSE1-209ENST00000479488 CCDC87Q9NVE4 849 aa20.17■□□□□ 0.82
GSE1-209ENST00000479488 MYH14Q7Z406 1995 aaKnown RBP20.16■□□□□ 0.82
GSE1-209ENST00000479488 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.16■□□□□ 0.82
GSE1-209ENST00000479488 SSFA2P28290 1259 aa20.16■□□□□ 0.82
GSE1-209ENST00000479488 TEX13AQ9BXU3 409 aaPredicted RBP20.16■□□□□ 0.82
GSE1-209ENST00000479488 SNRPA1P09661 255 aaKnown RBP20.15■□□□□ 0.82
GSE1-209ENST00000479488 RC3H1Q5TC82 1133 aaKnown RBP20.15■□□□□ 0.82
GSE1-209ENST00000479488 SMIM5Q71RC9 77 aa20.15■□□□□ 0.82
GSE1-209ENST00000479488 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
GSE1-209ENST00000479488 SPON1Q9HCB6 807 aa20.15■□□□□ 0.82
GSE1-209ENST00000479488 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
GSE1-209ENST00000479488 LAMB4A4D0S4 1761 aa20.15■□□□□ 0.82
GSE1-209ENST00000479488 CYP19A1P11511 503 aaPredicted RBP20.14■□□□□ 0.81
GSE1-209ENST00000479488 COL23A1Q86Y22 540 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms