RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
CMTM1-208ENST00000479381 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
CMTM1-208ENST00000479381 HSP90AB1P08238 724 aaKnown RBP12.23□□□□□ -0.45
CMTM1-208ENST00000479381 HMOX1P09601 288 aa12.23□□□□□ -0.45
CMTM1-208ENST00000479381 SMARCC1Q92922 1105 aaPredicted RBP12.23□□□□□ -0.45
CMTM1-208ENST00000479381 PHKG2P15735 406 aa12.22□□□□□ -0.45
CMTM1-208ENST00000479381 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
CMTM1-208ENST00000479381 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
CMTM1-208ENST00000479381 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
CMTM1-208ENST00000479381 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
CMTM1-208ENST00000479381 ITGB4P16144 1822 aa12.22□□□□□ -0.45
CMTM1-208ENST00000479381 ZNF827Q17R98 1081 aa12.21□□□□□ -0.45
CMTM1-208ENST00000479381 MIER1Q8N108 512 aa12.21□□□□□ -0.45
CMTM1-208ENST00000479381 AK7Q96M32 723 aa12.21□□□□□ -0.45
CMTM1-208ENST00000479381 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
CMTM1-208ENST00000479381 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.45
CMTM1-208ENST00000479381 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
CMTM1-208ENST00000479381 TOGARAM1Q9Y4F4 1720 aa12.2□□□□□ -0.46
CMTM1-208ENST00000479381 POLD1P28340 1107 aa12.2□□□□□ -0.46
CMTM1-208ENST00000479381 CABP4P57796 275 aa12.2□□□□□ -0.46
CMTM1-208ENST00000479381 PLCD3Q8N3E9 789 aa12.2□□□□□ -0.46
CMTM1-208ENST00000479381 PDGFDQ9GZP0 370 aaPredicted RBP12.2□□□□□ -0.46
CMTM1-208ENST00000479381 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
CMTM1-208ENST00000479381 LY75O60449 1722 aa12.2□□□□□ -0.46
CMTM1-208ENST00000479381 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
CMTM1-208ENST00000479381 PHF14O94880 888 aa12.19□□□□□ -0.46
CMTM1-208ENST00000479381 IL13P35225 146 aa12.19□□□□□ -0.46
CMTM1-208ENST00000479381 PIGBQ92521 554 aa12.19□□□□□ -0.46
CMTM1-208ENST00000479381 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
CMTM1-208ENST00000479381 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-208ENST00000479381 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
CMTM1-208ENST00000479381 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
CMTM1-208ENST00000479381 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
CMTM1-208ENST00000479381 C5P01031 1676 aa12.17□□□□□ -0.46
CMTM1-208ENST00000479381 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
CMTM1-208ENST00000479381 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
CMTM1-208ENST00000479381 NEFMP07197 916 aa12.16□□□□□ -0.46
CMTM1-208ENST00000479381 SIK1P57059 783 aa12.16□□□□□ -0.46
CMTM1-208ENST00000479381 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
CMTM1-208ENST00000479381 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
CMTM1-208ENST00000479381 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
CMTM1-208ENST00000479381 AKAP4Q5JQC9 854 aa12.15□□□□□ -0.46
CMTM1-208ENST00000479381 MSL1Q68DK7 614 aa12.15□□□□□ -0.46
CMTM1-208ENST00000479381 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
CMTM1-208ENST00000479381 ARXQ96QS3 562 aa12.15□□□□□ -0.46
CMTM1-208ENST00000479381 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
CMTM1-208ENST00000479381 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
CMTM1-208ENST00000479381 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
CMTM1-208ENST00000479381 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
CMTM1-208ENST00000479381 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
CMTM1-208ENST00000479381 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
CMTM1-208ENST00000479381 FLAD1Q8NFF5 587 aa12.14□□□□□ -0.47
CMTM1-208ENST00000479381 SLC16A10Q8TF71 515 aa12.14□□□□□ -0.47
CMTM1-208ENST00000479381 GNPATO15228 680 aa12.13□□□□□ -0.47
CMTM1-208ENST00000479381 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
CMTM1-208ENST00000479381 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
CMTM1-208ENST00000479381 C4BP0C0L5 1744 aa12.13□□□□□ -0.47
CMTM1-208ENST00000479381 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
CMTM1-208ENST00000479381 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
CMTM1-208ENST00000479381 PPP2R1AP30153 589 aa12.12□□□□□ -0.47
CMTM1-208ENST00000479381 NFATC2IPQ8NCF5 419 aa12.12□□□□□ -0.47
CMTM1-208ENST00000479381 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
CMTM1-208ENST00000479381 FHDC1Q9C0D6 1143 aaPredicted RBP12.12□□□□□ -0.47
CMTM1-208ENST00000479381 KDRP35968 1356 aa12.12□□□□□ -0.47
CMTM1-208ENST00000479381 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-208ENST00000479381 TEFQ10587 303 aa12.11□□□□□ -0.47
CMTM1-208ENST00000479381 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
CMTM1-208ENST00000479381 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
CMTM1-208ENST00000479381 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-208ENST00000479381 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
CMTM1-208ENST00000479381 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
CMTM1-208ENST00000479381 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
CMTM1-208ENST00000479381 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
CMTM1-208ENST00000479381 ZEB1P37275 1124 aaPredicted RBP12.1□□□□□ -0.47
CMTM1-208ENST00000479381 PTGER2P43116 358 aa12.1□□□□□ -0.47
CMTM1-208ENST00000479381 RTF1Q92541 710 aaKnown RBP12.1□□□□□ -0.47
CMTM1-208ENST00000479381 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
CMTM1-208ENST00000479381 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
CMTM1-208ENST00000479381 SCN11AQ9UI33 1791 aa12.1□□□□□ -0.47
CMTM1-208ENST00000479381 VIRMAQ69YN4 1812 aaKnown RBP12.09□□□□□ -0.47
CMTM1-208ENST00000479381 RNMTO43148 476 aaKnown RBP12.09□□□□□ -0.47
CMTM1-208ENST00000479381 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.47
CMTM1-208ENST00000479381 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 GNAT3A8MTJ3 354 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
CMTM1-208ENST00000479381 SSFA2P28290 1259 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 ITPK1Q13572 414 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 GPR162Q16538 588 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 SMIM5Q71RC9 77 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 LGR6Q9HBX8 967 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
CMTM1-208ENST00000479381 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
CMTM1-208ENST00000479381 RFC4P35249 363 aa12.07□□□□□ -0.48
CMTM1-208ENST00000479381 SLC39A6Q13433 755 aa12.07□□□□□ -0.48
CMTM1-208ENST00000479381 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
CMTM1-208ENST00000479381 NPM2Q86SE8 214 aaKnown RBP12.07□□□□□ -0.48
CMTM1-208ENST00000479381 SYT17Q9BSW7 474 aa12.07□□□□□ -0.48
CMTM1-208ENST00000479381 MAPK8IP3Q9UPT6 1336 aa12.07□□□□□ -0.48
CMTM1-208ENST00000479381 ZNF330Q9Y3S2 320 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms