RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 CYP2E1P05181 493 aaPredicted RBP13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 SLC20A2Q08357 652 aa13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 TMEM63CQ9P1W3 806 aa13.4□□□□□ -0.26
LRRFIP1-211ENST00000478958 WASLO00401 505 aaPredicted RBP13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 ZNF445P59923 1031 aa13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 G2E3Q7L622 706 aa13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 ERC2O15083 957 aa13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 MYRIPQ8NFW9 859 aa13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 GDPD2Q9HCC8 539 aa13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
LRRFIP1-211ENST00000478958 TRIM6-TRIM34B2RNG4 842 aa13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 FOXO3O43524 673 aa13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 RTL1A6NKG5 1358 aa13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 UPF3BQ9BZI7 483 aaKnown RBP13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 ANO2Q9NQ90 1003 aa13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 TMX3Q96JJ7 454 aa13.38□□□□□ -0.27
LRRFIP1-211ENST00000478958 ATP10DQ9P241 1426 aa13.37□□□□□ -0.27
LRRFIP1-211ENST00000478958 PDE1AP54750 535 aa13.37□□□□□ -0.27
LRRFIP1-211ENST00000478958 BCCIPQ9P287 314 aaKnown RBP eCLIP13.37□□□□□ -0.27
LRRFIP1-211ENST00000478958 MCM5P33992 734 aa13.37□□□□□ -0.27
LRRFIP1-211ENST00000478958 TSC1Q92574 1164 aa13.37□□□□□ -0.27
LRRFIP1-211ENST00000478958 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
LRRFIP1-211ENST00000478958 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
LRRFIP1-211ENST00000478958 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
LRRFIP1-211ENST00000478958 MYO5BQ9ULV0 1848 aa13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 CHL1O00533 1208 aa13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 DTNBO60941 627 aa13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 HMMRO75330 724 aa13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 IBTKQ9P2D0 1353 aaPredicted RBP13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 MAP2P11137 1827 aaKnown RBP13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 ALKQ9UM73 1620 aa13.35□□□□□ -0.27
LRRFIP1-211ENST00000478958 PTMAP06454 111 aaKnown RBP13.34□□□□□ -0.27
LRRFIP1-211ENST00000478958 KNDC1Q76NI1 1749 aa13.34□□□□□ -0.27
LRRFIP1-211ENST00000478958 HDAC5Q9UQL6 1122 aa13.34□□□□□ -0.27
LRRFIP1-211ENST00000478958 ARHGAP31Q2M1Z3 1444 aa13.34□□□□□ -0.27
LRRFIP1-211ENST00000478958 CCDC66A2RUB6 948 aa13.34□□□□□ -0.27
LRRFIP1-211ENST00000478958 LARP6Q9BRS8 491 aaKnown RBP13.34□□□□□ -0.27
LRRFIP1-211ENST00000478958 LRSAM1Q6UWE0 723 aa13.34□□□□□ -0.27
LRRFIP1-211ENST00000478958 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
LRRFIP1-211ENST00000478958 MAP4K4O95819 1239 aaPredicted RBP13.33□□□□□ -0.28
LRRFIP1-211ENST00000478958 APPP05067 770 aa13.33□□□□□ -0.28
LRRFIP1-211ENST00000478958 PDCL2Q8N4E4 241 aa13.33□□□□□ -0.28
LRRFIP1-211ENST00000478958 RGS12O14924 1447 aa13.33□□□□□ -0.28
LRRFIP1-211ENST00000478958 RTF1Q92541 710 aaKnown RBP13.33□□□□□ -0.28
LRRFIP1-211ENST00000478958 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
LRRFIP1-211ENST00000478958 TIGD1Q96MW7 591 aa13.32□□□□□ -0.28
LRRFIP1-211ENST00000478958 IL1RAPL2Q9NP60 686 aa13.32□□□□□ -0.28
LRRFIP1-211ENST00000478958 PNMA6EA0A0J9YXQ4 647 aa13.32□□□□□ -0.28
LRRFIP1-211ENST00000478958 CNPY4Q8N129 248 aa13.32□□□□□ -0.28
LRRFIP1-211ENST00000478958 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
LRRFIP1-211ENST00000478958 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
LRRFIP1-211ENST00000478958 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 PTPRCP08575 1304 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 HMGN5P82970 282 aaKnown RBP13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 PDLIM2Q96JY6 352 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 PRIMPOLQ96LW4 560 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 DIP2CQ9Y2E4 1556 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 METP08581 1390 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 CPS1P31327 1500 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 ATP7BP35670 1465 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 CDK12Q9NYV4 1490 aaPredicted RBP13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 CLGNO14967 610 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 GADD45BO75293 160 aaPredicted RBP13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 GNAI2P04899 355 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 ESYT1Q9BSJ8 1104 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
LRRFIP1-211ENST00000478958 MX1P20591 662 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 TMEM131LA2VDJ0 1609 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 KIF20BQ96Q89 1820 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 ZBTB9Q96C00 473 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 KIF3AQ9Y496 699 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 KIF24Q5T7B8 1368 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 PRR36Q9H6K5 1346 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 MCCP23508 829 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 MMP14P50281 582 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 PLCB2Q00722 1185 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 MTHFSDQ2M296 383 aaKnown RBP13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 STK31Q9BXU1 1019 aa13.3□□□□□ -0.28
LRRFIP1-211ENST00000478958 FAM177BA6PVY3 158 aa13.29□□□□□ -0.28
LRRFIP1-211ENST00000478958 IL25Q9H293 177 aa13.29□□□□□ -0.28
LRRFIP1-211ENST00000478958 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
LRRFIP1-211ENST00000478958 BRD1O95696 1058 aa13.29□□□□□ -0.28
LRRFIP1-211ENST00000478958 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■■□□ 15.9
LRRFIP1-211ENST00000478958 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
LRRFIP1-211ENST00000478958 NUTM1Q86Y26 1132 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms